Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Gm43898-201ENSMUST00000204456 424 ntBASIC0.41□□□□□ -2.34
Trem3Q9JKE1 Gm44446-201ENSMUST00000204864 255 ntBASIC0.41□□□□□ -2.34
Trem3Q9JKE1 AC164161.1-201ENSMUST00000214076 639 ntBASIC0.41□□□□□ -2.34
Trem3Q9JKE1 Gm23721-201ENSMUST00000083005 107 ntBASIC0.41□□□□□ -2.34
Trem3Q9JKE1 Gm25650-201ENSMUST00000083784 162 ntBASIC0.41□□□□□ -2.34
Trem3Q9JKE1 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.41□□□□□ -2.34
Trem3Q9JKE1 AC154515.1-201ENSMUST00000226085 2841 ntBASIC0.41□□□□□ -2.34
Trem3Q9JKE1 AC102369.2-201ENSMUST00000219725 1679 ntBASIC0.4□□□□□ -2.34
Trem3Q9JKE1 Gm23535-201ENSMUST00000157542 106 ntBASIC0.4□□□□□ -2.35
Trem3Q9JKE1 Gm25557-201ENSMUST00000158084 315 ntBASIC0.4□□□□□ -2.35
Trem3Q9JKE1 Gm9830-201ENSMUST00000178509 357 ntBASIC0.4□□□□□ -2.35
Trem3Q9JKE1 Gm28257-201ENSMUST00000185244 463 ntBASIC0.4□□□□□ -2.35
Trem3Q9JKE1 Gm28740-201ENSMUST00000186142 215 ntBASIC0.4□□□□□ -2.35
Trem3Q9JKE1 Gm38213-201ENSMUST00000193203 173 ntBASIC0.4□□□□□ -2.35
Trem3Q9JKE1 Gm38060-201ENSMUST00000194822 464 ntBASIC0.4□□□□□ -2.35
Trem3Q9JKE1 AC168062.3-201ENSMUST00000227025 165 ntBASIC0.4□□□□□ -2.35
Trem3Q9JKE1 DQ267101-201ENSMUST00000082562 73 ntBASIC0.4□□□□□ -2.35
Trem3Q9JKE1 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.4□□□□□ -2.35
Trem3Q9JKE1 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC0.4□□□□□ -2.35
Trem3Q9JKE1 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.4□□□□□ -2.35
Trem3Q9JKE1 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC0.39□□□□□ -2.35
Trem3Q9JKE1 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
Trem3Q9JKE1 Gm25413-201ENSMUST00000158544 312 ntBASIC0.39□□□□□ -2.35
Trem3Q9JKE1 Gm16588-201ENSMUST00000162889 355 ntBASIC0.39□□□□□ -2.35
Trem3Q9JKE1 Gm23619-201ENSMUST00000178411 94 ntBASIC0.39□□□□□ -2.35
Trem3Q9JKE1 Gm25474-201ENSMUST00000179052 94 ntBASIC0.39□□□□□ -2.35
Trem3Q9JKE1 Gm22047-201ENSMUST00000179176 94 ntBASIC0.39□□□□□ -2.35
Trem3Q9JKE1 Gm25253-201ENSMUST00000179958 107 ntBASIC0.39□□□□□ -2.35
Trem3Q9JKE1 Mir6364-201ENSMUST00000183396 86 ntBASIC0.39□□□□□ -2.35
Trem3Q9JKE1 Gm8151-201ENSMUST00000184817 871 ntBASIC0.39□□□□□ -2.35
Trem3Q9JKE1 Mir7052-201ENSMUST00000184821 65 ntBASIC0.39□□□□□ -2.35
Trem3Q9JKE1 Gm36956-201ENSMUST00000193830 214 ntBASIC0.39□□□□□ -2.35
Trem3Q9JKE1 Gm26228-201ENSMUST00000082512 107 ntBASIC0.39□□□□□ -2.35
Trem3Q9JKE1 Gm25080-201ENSMUST00000082526 107 ntBASIC0.39□□□□□ -2.35
Trem3Q9JKE1 Gm25475-201ENSMUST00000082825 180 ntBASIC0.39□□□□□ -2.35
Trem3Q9JKE1 Gm22229-201ENSMUST00000082987 108 ntBASIC0.39□□□□□ -2.35
Trem3Q9JKE1 Gm25518-201ENSMUST00000083864 107 ntBASIC0.39□□□□□ -2.35
Trem3Q9JKE1 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
Trem3Q9JKE1 Gm24271-201ENSMUST00000102327 111 ntBASIC0.38□□□□□ -2.35
Trem3Q9JKE1 Gm26339-201ENSMUST00000102368 99 ntBASIC0.38□□□□□ -2.35
Trem3Q9JKE1 Gm24172-201ENSMUST00000104127 117 ntBASIC0.38□□□□□ -2.35
Trem3Q9JKE1 Gm24889-201ENSMUST00000104388 132 ntBASIC0.38□□□□□ -2.35
Trem3Q9JKE1 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC0.38□□□□□ -2.35
Trem3Q9JKE1 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC0.38□□□□□ -2.35
Trem3Q9JKE1 Gm26914-201ENSMUST00000182262 223 ntBASIC0.38□□□□□ -2.35
Trem3Q9JKE1 Gm27894-201ENSMUST00000184177 92 ntBASIC0.38□□□□□ -2.35
Trem3Q9JKE1 Mir6240-201ENSMUST00000184281 117 ntBASIC0.38□□□□□ -2.35
Trem3Q9JKE1 Gm37869-201ENSMUST00000193385 595 ntBASIC0.38□□□□□ -2.35
Trem3Q9JKE1 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.38□□□□□ -2.35
Trem3Q9JKE1 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC0.38□□□□□ -2.35
Trem3Q9JKE1 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
Trem3Q9JKE1 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.38□□□□□ -2.35
Trem3Q9JKE1 Gm24261-201ENSMUST00000083744 104 ntBASIC0.38□□□□□ -2.35
Trem3Q9JKE1 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC0.38□□□□□ -2.35
Trem3Q9JKE1 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
Trem3Q9JKE1 Gm26082-201ENSMUST00000104070 127 ntBASIC0.37□□□□□ -2.35
Trem3Q9JKE1 Gm22482-201ENSMUST00000122563 359 ntBASIC0.37□□□□□ -2.35
Trem3Q9JKE1 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC0.37□□□□□ -2.35
Trem3Q9JKE1 Gm22654-201ENSMUST00000157874 105 ntBASIC0.37□□□□□ -2.35
Trem3Q9JKE1 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
Trem3Q9JKE1 Snora24-201ENSMUST00000174989 130 ntBASIC0.37□□□□□ -2.35
Trem3Q9JKE1 Gm22802-201ENSMUST00000175621 89 ntBASIC0.37□□□□□ -2.35
Trem3Q9JKE1 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
Trem3Q9JKE1 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC0.37□□□□□ -2.35
Trem3Q9JKE1 Gm28435-201ENSMUST00000185496 108 ntBASIC0.37□□□□□ -2.35
Trem3Q9JKE1 Gm43432-201ENSMUST00000196352 121 ntBASIC0.37□□□□□ -2.35
Trem3Q9JKE1 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC0.37□□□□□ -2.35
Trem3Q9JKE1 AC138667.2-201ENSMUST00000224880 598 ntBASIC0.37□□□□□ -2.35
Trem3Q9JKE1 Gm26437-201ENSMUST00000082595 105 ntBASIC0.37□□□□□ -2.35
Trem3Q9JKE1 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC0.37□□□□□ -2.35
Trem3Q9JKE1 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC0.36□□□□□ -2.35
Trem3Q9JKE1 AC164297.1-201ENSMUST00000224484 1561 ntBASIC0.36□□□□□ -2.35
Trem3Q9JKE1 Gm22522-201ENSMUST00000158271 151 ntBASIC0.36□□□□□ -2.35
Trem3Q9JKE1 Gm28439-201ENSMUST00000187714 876 ntBASIC0.36□□□□□ -2.35
Trem3Q9JKE1 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC0.36□□□□□ -2.35
Trem3Q9JKE1 Gm43993-201ENSMUST00000203972 247 ntBASIC0.36□□□□□ -2.35
Trem3Q9JKE1 Gm44976-201ENSMUST00000205543 261 ntBASIC0.36□□□□□ -2.35
Trem3Q9JKE1 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC0.36□□□□□ -2.35
Trem3Q9JKE1 Gm18213-201ENSMUST00000207850 178 ntBASIC0.36□□□□□ -2.35
Trem3Q9JKE1 Gm13475-201ENSMUST00000119290 234 ntBASIC0.35□□□□□ -2.35
Trem3Q9JKE1 Gm13804-201ENSMUST00000119552 172 ntBASIC0.35□□□□□ -2.35
Trem3Q9JKE1 Gm28862-201ENSMUST00000188246 163 ntBASIC0.35□□□□□ -2.35
Trem3Q9JKE1 Gm26265-202ENSMUST00000196326 133 ntBASIC0.35□□□□□ -2.35
Trem3Q9JKE1 Mir7118-201ENSMUST00000197760 61 ntBASIC0.35□□□□□ -2.35
Trem3Q9JKE1 Gm44465-201ENSMUST00000199536 114 ntBASIC0.35□□□□□ -2.35
Trem3Q9JKE1 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
Trem3Q9JKE1 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
Trem3Q9JKE1 Gm24152-201ENSMUST00000082764 163 ntBASIC0.35□□□□□ -2.35
Trem3Q9JKE1 Gm24038-201ENSMUST00000082872 159 ntBASIC0.35□□□□□ -2.35
Trem3Q9JKE1 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.35□□□□□ -2.35
Trem3Q9JKE1 Gm25896-201ENSMUST00000083713 136 ntBASIC0.35□□□□□ -2.35
Trem3Q9JKE1 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
Trem3Q9JKE1 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.34□□□□□ -2.35
Trem3Q9JKE1 Gm24338-201ENSMUST00000104205 127 ntBASIC0.34□□□□□ -2.36
Trem3Q9JKE1 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.34□□□□□ -2.36
Trem3Q9JKE1 Gm22796-201ENSMUST00000157234 106 ntBASIC0.34□□□□□ -2.36
Trem3Q9JKE1 Gm24678-201ENSMUST00000158756 104 ntBASIC0.34□□□□□ -2.36
Trem3Q9JKE1 Gm24323-201ENSMUST00000175342 77 ntBASIC0.34□□□□□ -2.36
Trem3Q9JKE1 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC0.34□□□□□ -2.36
Trem3Q9JKE1 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms