Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gm9236-201ENSMUST00000196892 587 ntBASIC-0.82□□□□□ -2.54
Smco4Q9JIS3 Igkv13-82-201ENSMUST00000200308 346 ntBASIC-0.82□□□□□ -2.54
Smco4Q9JIS3 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC-0.82□□□□□ -2.54
Smco4Q9JIS3 Gm19855-201ENSMUST00000210145 249 ntBASIC-0.82□□□□□ -2.54
Smco4Q9JIS3 Gm22704-201ENSMUST00000083027 137 ntBASIC-0.82□□□□□ -2.54
Smco4Q9JIS3 Gm26128-201ENSMUST00000083170 110 ntBASIC-0.82□□□□□ -2.54
Smco4Q9JIS3 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC-0.82□□□□□ -2.54
Smco4Q9JIS3 n-R5s6-201ENSMUST00000122663 88 ntBASIC-0.83□□□□□ -2.54
Smco4Q9JIS3 Mir1942-201ENSMUST00000157274 63 ntBASIC-0.83□□□□□ -2.54
Smco4Q9JIS3 Gm22221-201ENSMUST00000157362 103 ntBASIC-0.83□□□□□ -2.54
Smco4Q9JIS3 Gm25059-201ENSMUST00000157367 117 ntBASIC-0.83□□□□□ -2.54
Smco4Q9JIS3 Gm23036-201ENSMUST00000157885 99 ntBASIC-0.83□□□□□ -2.54
Smco4Q9JIS3 Gm22764-201ENSMUST00000158370 92 ntBASIC-0.83□□□□□ -2.54
Smco4Q9JIS3 Gm22011-201ENSMUST00000158790 123 ntBASIC-0.83□□□□□ -2.54
Smco4Q9JIS3 Gm25643-201ENSMUST00000158874 103 ntBASIC-0.83□□□□□ -2.54
Smco4Q9JIS3 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC-0.83□□□□□ -2.54
Smco4Q9JIS3 Gm28257-201ENSMUST00000185244 463 ntBASIC-0.83□□□□□ -2.54
Smco4Q9JIS3 Gm42647-201ENSMUST00000195939 459 ntBASIC-0.83□□□□□ -2.54
Smco4Q9JIS3 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.83□□□□□ -2.54
Smco4Q9JIS3 AC122905.2-201ENSMUST00000220325 269 ntBASIC-0.83□□□□□ -2.54
Smco4Q9JIS3 Rny1-201ENSMUST00000083767 112 ntBASIC-0.83□□□□□ -2.54
Smco4Q9JIS3 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.84□□□□□ -2.54
Smco4Q9JIS3 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.84□□□□□ -2.54
Smco4Q9JIS3 Gm22776-201ENSMUST00000178634 94 ntBASIC-0.84□□□□□ -2.54
Smco4Q9JIS3 Gm23767-201ENSMUST00000179278 94 ntBASIC-0.84□□□□□ -2.54
Smco4Q9JIS3 Gm29815-201ENSMUST00000202418 178 ntBASIC-0.84□□□□□ -2.54
Smco4Q9JIS3 Gm43897-201ENSMUST00000204019 309 ntBASIC-0.84□□□□□ -2.54
Smco4Q9JIS3 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.84□□□□□ -2.54
Smco4Q9JIS3 Gm29754-201ENSMUST00000206269 358 ntBASIC-0.84□□□□□ -2.54
Smco4Q9JIS3 Gm18252-203ENSMUST00000215855 757 ntBASIC-0.84□□□□□ -2.54
Smco4Q9JIS3 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC-0.84□□□□□ -2.54
Smco4Q9JIS3 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC-0.84□□□□□ -2.54
Smco4Q9JIS3 Gm23517-201ENSMUST00000082830 192 ntBASIC-0.84□□□□□ -2.54
Smco4Q9JIS3 Mir500-201ENSMUST00000093600 92 ntBASIC-0.84□□□□□ -2.54
Smco4Q9JIS3 Gm24342-201ENSMUST00000103907 104 ntBASIC-0.85□□□□□ -2.55
Smco4Q9JIS3 Gm22496-201ENSMUST00000104493 88 ntBASIC-0.85□□□□□ -2.55
Smco4Q9JIS3 Gm14594-201ENSMUST00000118052 537 ntBASIC-0.85□□□□□ -2.55
Smco4Q9JIS3 Gm14590-201ENSMUST00000118934 537 ntBASIC-0.85□□□□□ -2.55
Smco4Q9JIS3 Gm13341-201ENSMUST00000120780 672 ntBASIC-0.85□□□□□ -2.55
Smco4Q9JIS3 Gm11334-201ENSMUST00000121969 156 ntBASIC-0.85□□□□□ -2.55
Smco4Q9JIS3 Gm23416-201ENSMUST00000175520 95 ntBASIC-0.85□□□□□ -2.55
Smco4Q9JIS3 Gm25175-201ENSMUST00000178712 79 ntBASIC-0.85□□□□□ -2.55
Smco4Q9JIS3 Gm14596-201ENSMUST00000180268 537 ntBASIC-0.85□□□□□ -2.55
Smco4Q9JIS3 Gm14595-201ENSMUST00000180335 537 ntBASIC-0.85□□□□□ -2.55
Smco4Q9JIS3 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0.85□□□□□ -2.55
Smco4Q9JIS3 Gm29288-201ENSMUST00000191582 901 ntBASIC-0.85□□□□□ -2.55
Smco4Q9JIS3 Mir468-201ENSMUST00000197332 78 ntBASIC-0.85□□□□□ -2.55
Smco4Q9JIS3 Gm44404-201ENSMUST00000203979 636 ntBASIC-0.85□□□□□ -2.55
Smco4Q9JIS3 Gm2829-201ENSMUST00000213121 499 ntBASIC-0.85□□□□□ -2.55
Smco4Q9JIS3 Gm18113-201ENSMUST00000220630 303 ntBASIC-0.85□□□□□ -2.55
Smco4Q9JIS3 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC-0.85□□□□□ -2.55
Smco4Q9JIS3 Gm25110-201ENSMUST00000116684 121 ntBASIC-0.86□□□□□ -2.55
Smco4Q9JIS3 Gm25775-201ENSMUST00000116716 121 ntBASIC-0.86□□□□□ -2.55
Smco4Q9JIS3 Gm24795-201ENSMUST00000116737 121 ntBASIC-0.86□□□□□ -2.55
Smco4Q9JIS3 Gm25171-201ENSMUST00000116926 121 ntBASIC-0.86□□□□□ -2.55
Smco4Q9JIS3 Gm16032-201ENSMUST00000118534 168 ntBASIC-0.86□□□□□ -2.55
Smco4Q9JIS3 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC-0.86□□□□□ -2.55
Smco4Q9JIS3 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC-0.86□□□□□ -2.55
Smco4Q9JIS3 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC-0.86□□□□□ -2.55
Smco4Q9JIS3 Gm24977-201ENSMUST00000083106 163 ntBASIC-0.86□□□□□ -2.55
Smco4Q9JIS3 Gm23042-201ENSMUST00000083866 101 ntBASIC-0.86□□□□□ -2.55
Smco4Q9JIS3 Defa-ps13-201ENSMUST00000120695 204 ntBASIC-0.87□□□□□ -2.55
Smco4Q9JIS3 Gm25375-201ENSMUST00000158157 135 ntBASIC-0.87□□□□□ -2.55
Smco4Q9JIS3 Gm24768-201ENSMUST00000158512 94 ntBASIC-0.87□□□□□ -2.55
Smco4Q9JIS3 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC-0.87□□□□□ -2.55
Smco4Q9JIS3 Gm23462-201ENSMUST00000083264 104 ntBASIC-0.87□□□□□ -2.55
Smco4Q9JIS3 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC-0.88□□□□□ -2.55
Smco4Q9JIS3 Gm24390-201ENSMUST00000179578 62 ntBASIC-0.88□□□□□ -2.55
Smco4Q9JIS3 Mir6915-201ENSMUST00000198839 69 ntBASIC-0.88□□□□□ -2.55
Smco4Q9JIS3 AC167669.4-201ENSMUST00000225967 140 ntBASIC-0.88□□□□□ -2.55
Smco4Q9JIS3 Gm22972-201ENSMUST00000083297 131 ntBASIC-0.88□□□□□ -2.55
Smco4Q9JIS3 Mir340-201ENSMUST00000083483 98 ntBASIC-0.88□□□□□ -2.55
Smco4Q9JIS3 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC-0.88□□□□□ -2.55
Smco4Q9JIS3 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC-0.89□□□□□ -2.55
Smco4Q9JIS3 Gm23783-201ENSMUST00000157941 102 ntBASIC-0.89□□□□□ -2.55
Smco4Q9JIS3 Gm23994-201ENSMUST00000158059 88 ntBASIC-0.89□□□□□ -2.55
Smco4Q9JIS3 Mir7079-201ENSMUST00000184697 69 ntBASIC-0.89□□□□□ -2.55
Smco4Q9JIS3 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC-0.89□□□□□ -2.55
Smco4Q9JIS3 Gm26265-202ENSMUST00000196326 133 ntBASIC-0.89□□□□□ -2.55
Smco4Q9JIS3 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC-0.89□□□□□ -2.55
Smco4Q9JIS3 Gm23377-201ENSMUST00000082943 126 ntBASIC-0.89□□□□□ -2.55
Smco4Q9JIS3 Gm24615-201ENSMUST00000083268 113 ntBASIC-0.89□□□□□ -2.55
Smco4Q9JIS3 Gm25896-201ENSMUST00000083713 136 ntBASIC-0.89□□□□□ -2.55
Smco4Q9JIS3 Mir670-201ENSMUST00000102380 100 ntBASIC-0.9□□□□□ -2.55
Smco4Q9JIS3 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC-0.9□□□□□ -2.55
Smco4Q9JIS3 Gm15289-201ENSMUST00000117793 244 ntBASIC-0.9□□□□□ -2.55
Smco4Q9JIS3 Gm27365-201ENSMUST00000184041 177 ntBASIC-0.9□□□□□ -2.55
Smco4Q9JIS3 Gm7654-201ENSMUST00000186738 683 ntBASIC-0.9□□□□□ -2.55
Smco4Q9JIS3 Gm29350-201ENSMUST00000189141 541 ntBASIC-0.9□□□□□ -2.55
Smco4Q9JIS3 Gm44988-201ENSMUST00000203835 1161 ntBASIC-0.9□□□□□ -2.55
Smco4Q9JIS3 CT954323.1-201ENSMUST00000222774 229 ntBASIC-0.9□□□□□ -2.55
Smco4Q9JIS3 AC154692.1-201ENSMUST00000228314 544 ntBASIC-0.9□□□□□ -2.55
Smco4Q9JIS3 Gm8508-201ENSMUST00000061226 363 ntBASIC-0.9□□□□□ -2.55
Smco4Q9JIS3 Gm24379-201ENSMUST00000122695 86 ntBASIC-0.91□□□□□ -2.56
Smco4Q9JIS3 Gm26149-201ENSMUST00000157432 108 ntBASIC-0.91□□□□□ -2.56
Smco4Q9JIS3 Gm20415-201ENSMUST00000172877 423 ntBASIC-0.91□□□□□ -2.56
Smco4Q9JIS3 AC154603.1-201ENSMUST00000224355 313 ntBASIC-0.91□□□□□ -2.56
Smco4Q9JIS3 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC-0.92□□□□□ -2.56
Smco4Q9JIS3 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC-0.92□□□□□ -2.56
Smco4Q9JIS3 Gm25432-201ENSMUST00000158284 66 ntBASIC-0.92□□□□□ -2.56
Retrieved 100 of 76,532 protein–RNA pairs in 174.6 ms