Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.51□□□□□ -2.01
Trim54Q9ERP3 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Trim54Q9ERP3 Gm22151-201ENSMUST00000116963 58 ntBASIC2.5□□□□□ -2.01
Trim54Q9ERP3 Gm6829-201ENSMUST00000119858 360 ntBASIC2.5□□□□□ -2.01
Trim54Q9ERP3 Gm27723-201ENSMUST00000157398 63 ntBASIC2.5□□□□□ -2.01
Trim54Q9ERP3 Gm27521-201ENSMUST00000184022 64 ntBASIC2.5□□□□□ -2.01
Trim54Q9ERP3 Gm28627-201ENSMUST00000186141 453 ntBASIC2.5□□□□□ -2.01
Trim54Q9ERP3 Gm28724-201ENSMUST00000186149 625 ntBASIC2.5□□□□□ -2.01
Trim54Q9ERP3 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC2.5□□□□□ -2.01
Trim54Q9ERP3 Gm37377-201ENSMUST00000191733 304 ntBASIC2.5□□□□□ -2.01
Trim54Q9ERP3 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Trim54Q9ERP3 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.5□□□□□ -2.01
Trim54Q9ERP3 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.5□□□□□ -2.01
Trim54Q9ERP3 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim54Q9ERP3 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim54Q9ERP3 Gm12351-201ENSMUST00000118727 292 ntBASIC2.49□□□□□ -2.01
Trim54Q9ERP3 Gm24818-201ENSMUST00000175093 161 ntBASIC2.49□□□□□ -2.01
Trim54Q9ERP3 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Trim54Q9ERP3 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.49□□□□□ -2.01
Trim54Q9ERP3 Gm44320-201ENSMUST00000199276 86 ntBASIC2.49□□□□□ -2.01
Trim54Q9ERP3 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC2.49□□□□□ -2.01
Trim54Q9ERP3 Gm45313-201ENSMUST00000210584 178 ntBASIC2.49□□□□□ -2.01
Trim54Q9ERP3 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.49□□□□□ -2.01
Trim54Q9ERP3 Gm26126-201ENSMUST00000083188 164 ntBASIC2.49□□□□□ -2.01
Trim54Q9ERP3 Gm23249-201ENSMUST00000083369 161 ntBASIC2.49□□□□□ -2.01
Trim54Q9ERP3 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.49□□□□□ -2.01
Trim54Q9ERP3 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.49□□□□□ -2.01
Trim54Q9ERP3 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Trim54Q9ERP3 Gm11862-201ENSMUST00000119678 659 ntBASIC2.48□□□□□ -2.01
Trim54Q9ERP3 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.48□□□□□ -2.01
Trim54Q9ERP3 Gm12926-201ENSMUST00000121158 409 ntBASIC2.48□□□□□ -2.01
Trim54Q9ERP3 Gm24937-201ENSMUST00000122597 134 ntBASIC2.48□□□□□ -2.01
Trim54Q9ERP3 Gm22535-201ENSMUST00000158174 119 ntBASIC2.48□□□□□ -2.01
Trim54Q9ERP3 Gm17067-202ENSMUST00000180131 123 ntBASIC2.48□□□□□ -2.01
Trim54Q9ERP3 Gm18357-201ENSMUST00000188184 580 ntBASIC2.48□□□□□ -2.01
Trim54Q9ERP3 Gm28169-201ENSMUST00000190342 345 ntBASIC2.48□□□□□ -2.01
Trim54Q9ERP3 Gm43626-201ENSMUST00000198575 162 ntBASIC2.48□□□□□ -2.01
Trim54Q9ERP3 Gm43587-201ENSMUST00000199590 204 ntBASIC2.48□□□□□ -2.01
Trim54Q9ERP3 AC145736.2-201ENSMUST00000216305 365 ntBASIC2.48□□□□□ -2.01
Trim54Q9ERP3 AC166830.2-201ENSMUST00000225821 196 ntBASIC2.48□□□□□ -2.01
Trim54Q9ERP3 AC122834.1-201ENSMUST00000227182 425 ntBASIC2.48□□□□□ -2.01
Trim54Q9ERP3 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.48□□□□□ -2.01
Trim54Q9ERP3 Gm22294-201ENSMUST00000083308 104 ntBASIC2.48□□□□□ -2.01
Trim54Q9ERP3 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.48□□□□□ -2.01
Trim54Q9ERP3 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
Trim54Q9ERP3 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Trim54Q9ERP3 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Trim54Q9ERP3 Gm37096-201ENSMUST00000192317 2058 ntBASIC2.47□□□□□ -2.01
Trim54Q9ERP3 Gm26249-201ENSMUST00000116708 118 ntBASIC2.47□□□□□ -2.01
Trim54Q9ERP3 Gm15002-201ENSMUST00000118406 452 ntBASIC2.47□□□□□ -2.01
Trim54Q9ERP3 Gm2830-201ENSMUST00000140330 385 ntBASIC2.47□□□□□ -2.01
Trim54Q9ERP3 Gm23548-201ENSMUST00000158963 106 ntBASIC2.47□□□□□ -2.01
Trim54Q9ERP3 Gm24573-201ENSMUST00000175499 112 ntBASIC2.47□□□□□ -2.01
Trim54Q9ERP3 Mir8090-201ENSMUST00000185078 136 ntBASIC2.47□□□□□ -2.01
Trim54Q9ERP3 Gm28849-201ENSMUST00000188127 174 ntBASIC2.47□□□□□ -2.01
Trim54Q9ERP3 Gm28330-201ENSMUST00000190353 171 ntBASIC2.47□□□□□ -2.01
Trim54Q9ERP3 Gm38060-201ENSMUST00000194822 464 ntBASIC2.47□□□□□ -2.01
Trim54Q9ERP3 Gm44666-201ENSMUST00000208544 391 ntBASIC2.47□□□□□ -2.01
Trim54Q9ERP3 AC159709.1-201ENSMUST00000220445 349 ntBASIC2.47□□□□□ -2.01
Trim54Q9ERP3 Gm26497-201ENSMUST00000083146 107 ntBASIC2.47□□□□□ -2.01
Trim54Q9ERP3 Mir322-201ENSMUST00000083484 95 ntBASIC2.47□□□□□ -2.01
Trim54Q9ERP3 Gm10222-201ENSMUST00000088336 294 ntBASIC2.47□□□□□ -2.01
Trim54Q9ERP3 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.47□□□□□ -2.01
Trim54Q9ERP3 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.46□□□□□ -2.02
Trim54Q9ERP3 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
Trim54Q9ERP3 Gm24116-201ENSMUST00000103975 107 ntBASIC2.46□□□□□ -2.02
Trim54Q9ERP3 Gm12941-201ENSMUST00000117934 220 ntBASIC2.46□□□□□ -2.02
Trim54Q9ERP3 Gm11904-201ENSMUST00000120562 248 ntBASIC2.46□□□□□ -2.02
Trim54Q9ERP3 Gm13913-201ENSMUST00000121126 260 ntBASIC2.46□□□□□ -2.02
Trim54Q9ERP3 Gm24858-201ENSMUST00000158058 323 ntBASIC2.46□□□□□ -2.02
Trim54Q9ERP3 Gm23581-201ENSMUST00000158531 63 ntBASIC2.46□□□□□ -2.02
Trim54Q9ERP3 Gm24053-201ENSMUST00000158620 105 ntBASIC2.46□□□□□ -2.02
Trim54Q9ERP3 Gm20613-201ENSMUST00000175828 345 ntBASIC2.46□□□□□ -2.02
Trim54Q9ERP3 Gm43722-201ENSMUST00000196054 124 ntBASIC2.46□□□□□ -2.02
Trim54Q9ERP3 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.46□□□□□ -2.02
Trim54Q9ERP3 Mir7215-201ENSMUST00000200383 51 ntBASIC2.46□□□□□ -2.02
Trim54Q9ERP3 Gm44055-201ENSMUST00000204376 247 ntBASIC2.46□□□□□ -2.02
Trim54Q9ERP3 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.46□□□□□ -2.02
Trim54Q9ERP3 Gm45445-201ENSMUST00000209586 232 ntBASIC2.46□□□□□ -2.02
Trim54Q9ERP3 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.46□□□□□ -2.02
Trim54Q9ERP3 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.46□□□□□ -2.02
Trim54Q9ERP3 AC102369.2-201ENSMUST00000219725 1679 ntBASIC2.46□□□□□ -2.02
Trim54Q9ERP3 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Trim54Q9ERP3 Gm23013-201ENSMUST00000104146 106 ntBASIC2.45□□□□□ -2.02
Trim54Q9ERP3 Gm14001-201ENSMUST00000118847 247 ntBASIC2.45□□□□□ -2.02
Trim54Q9ERP3 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC2.45□□□□□ -2.02
Trim54Q9ERP3 Gm8121-201ENSMUST00000153583 499 ntBASIC2.45□□□□□ -2.02
Trim54Q9ERP3 Gm25711-201ENSMUST00000158633 128 ntBASIC2.45□□□□□ -2.02
Trim54Q9ERP3 Gm25253-201ENSMUST00000179958 107 ntBASIC2.45□□□□□ -2.02
Trim54Q9ERP3 Mir7226-201ENSMUST00000184953 60 ntBASIC2.45□□□□□ -2.02
Trim54Q9ERP3 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.45□□□□□ -2.02
Trim54Q9ERP3 Gm26265-202ENSMUST00000196326 133 ntBASIC2.45□□□□□ -2.02
Trim54Q9ERP3 Gm43676-201ENSMUST00000197532 540 ntBASIC2.45□□□□□ -2.02
Trim54Q9ERP3 Mir1291-201ENSMUST00000199842 117 ntBASIC2.45□□□□□ -2.02
Trim54Q9ERP3 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.45□□□□□ -2.02
Trim54Q9ERP3 Snora34-201ENSMUST00000083402 138 ntBASIC2.45□□□□□ -2.02
Trim54Q9ERP3 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Trim54Q9ERP3 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.44□□□□□ -2.02
Trim54Q9ERP3 Gm14919-201ENSMUST00000120839 390 ntBASIC2.44□□□□□ -2.02
Trim54Q9ERP3 Gm24598-201ENSMUST00000122510 74 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms