Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm25896-201ENSMUST00000083713 136 ntBASIC1□□□□□ -2.25
Lima1Q9ERG0 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
Lima1Q9ERG0 Gm23015-201ENSMUST00000104145 128 ntBASIC0.99□□□□□ -2.25
Lima1Q9ERG0 Gm14355-201ENSMUST00000117352 264 ntBASIC0.99□□□□□ -2.25
Lima1Q9ERG0 Gm14364-201ENSMUST00000129209 267 ntBASIC0.99□□□□□ -2.25
Lima1Q9ERG0 Gm26038-201ENSMUST00000158151 106 ntBASIC0.99□□□□□ -2.25
Lima1Q9ERG0 Rnu7-201ENSMUST00000158458 62 ntBASIC0.99□□□□□ -2.25
Lima1Q9ERG0 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC0.99□□□□□ -2.25
Lima1Q9ERG0 Gm22263-201ENSMUST00000180060 104 ntBASIC0.99□□□□□ -2.25
Lima1Q9ERG0 Gm44429-201ENSMUST00000203542 186 ntBASIC0.99□□□□□ -2.25
Lima1Q9ERG0 Gm7495-201ENSMUST00000215099 426 ntBASIC0.99□□□□□ -2.25
Lima1Q9ERG0 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC0.99□□□□□ -2.25
Lima1Q9ERG0 AC133156.1-202ENSMUST00000227284 363 ntBASIC0.99□□□□□ -2.25
Lima1Q9ERG0 AC160550.1-201ENSMUST00000228659 181 ntBASIC0.99□□□□□ -2.25
Lima1Q9ERG0 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
Lima1Q9ERG0 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
Lima1Q9ERG0 Gm23411-201ENSMUST00000157988 62 ntBASIC0.98□□□□□ -2.25
Lima1Q9ERG0 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.98□□□□□ -2.25
Lima1Q9ERG0 Gm23967-201ENSMUST00000175062 78 ntBASIC0.98□□□□□ -2.25
Lima1Q9ERG0 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
Lima1Q9ERG0 Gm37658-201ENSMUST00000192672 315 ntBASIC0.98□□□□□ -2.25
Lima1Q9ERG0 Gm43035-201ENSMUST00000197626 517 ntBASIC0.98□□□□□ -2.25
Lima1Q9ERG0 Gm42857-201ENSMUST00000200823 339 ntBASIC0.98□□□□□ -2.25
Lima1Q9ERG0 Gm44282-201ENSMUST00000203199 190 ntBASIC0.98□□□□□ -2.25
Lima1Q9ERG0 Gm35736-201ENSMUST00000203681 313 ntBASIC0.98□□□□□ -2.25
Lima1Q9ERG0 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
Lima1Q9ERG0 AC138290.2-201ENSMUST00000218822 369 ntBASIC0.98□□□□□ -2.25
Lima1Q9ERG0 AC144733.1-201ENSMUST00000222893 1289 ntBASIC0.98□□□□□ -2.25
Lima1Q9ERG0 AC168062.3-201ENSMUST00000227025 165 ntBASIC0.98□□□□□ -2.25
Lima1Q9ERG0 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC0.98□□□□□ -2.25
Lima1Q9ERG0 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC0.97□□□□□ -2.25
Lima1Q9ERG0 Gm23212-201ENSMUST00000122718 60 ntBASIC0.97□□□□□ -2.25
Lima1Q9ERG0 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
Lima1Q9ERG0 Gm22136-201ENSMUST00000158751 268 ntBASIC0.97□□□□□ -2.25
Lima1Q9ERG0 Gm25163-201ENSMUST00000158905 104 ntBASIC0.97□□□□□ -2.25
Lima1Q9ERG0 Gm22308-201ENSMUST00000177609 107 ntBASIC0.97□□□□□ -2.25
Lima1Q9ERG0 Mir7665-201ENSMUST00000184907 63 ntBASIC0.97□□□□□ -2.25
Lima1Q9ERG0 Mir8090-201ENSMUST00000185078 136 ntBASIC0.97□□□□□ -2.25
Lima1Q9ERG0 Gm19901-201ENSMUST00000192191 495 ntBASIC0.97□□□□□ -2.25
Lima1Q9ERG0 Gm38280-201ENSMUST00000192610 158 ntBASIC0.97□□□□□ -2.25
Lima1Q9ERG0 Gm38274-201ENSMUST00000195689 148 ntBASIC0.97□□□□□ -2.25
Lima1Q9ERG0 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC0.97□□□□□ -2.25
Lima1Q9ERG0 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC0.97□□□□□ -2.25
Lima1Q9ERG0 AC153541.1-201ENSMUST00000213786 294 ntBASIC0.97□□□□□ -2.25
Lima1Q9ERG0 AL772265.1-201ENSMUST00000214379 305 ntBASIC0.97□□□□□ -2.25
Lima1Q9ERG0 AC163646.2-201ENSMUST00000227962 141 ntBASIC0.97□□□□□ -2.25
Lima1Q9ERG0 AC127371.3-201ENSMUST00000228129 415 ntBASIC0.97□□□□□ -2.25
Lima1Q9ERG0 Gm25859-201ENSMUST00000083710 91 ntBASIC0.97□□□□□ -2.25
Lima1Q9ERG0 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
Lima1Q9ERG0 Gm6829-201ENSMUST00000119858 360 ntBASIC0.96□□□□□ -2.26
Lima1Q9ERG0 Gm13992-201ENSMUST00000120558 156 ntBASIC0.96□□□□□ -2.26
Lima1Q9ERG0 Gm24632-201ENSMUST00000122770 323 ntBASIC0.96□□□□□ -2.26
Lima1Q9ERG0 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC0.96□□□□□ -2.26
Lima1Q9ERG0 Gm24901-201ENSMUST00000158125 110 ntBASIC0.96□□□□□ -2.26
Lima1Q9ERG0 Gm8151-201ENSMUST00000184817 871 ntBASIC0.96□□□□□ -2.26
Lima1Q9ERG0 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC0.96□□□□□ -2.26
Lima1Q9ERG0 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC0.96□□□□□ -2.26
Lima1Q9ERG0 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
Lima1Q9ERG0 Gm23370-201ENSMUST00000199545 130 ntBASIC0.96□□□□□ -2.26
Lima1Q9ERG0 Gm45315-201ENSMUST00000209283 333 ntBASIC0.96□□□□□ -2.26
Lima1Q9ERG0 AC122834.1-201ENSMUST00000227182 425 ntBASIC0.96□□□□□ -2.26
Lima1Q9ERG0 Snora41-201ENSMUST00000082668 132 ntBASIC0.96□□□□□ -2.26
Lima1Q9ERG0 Gm25038-201ENSMUST00000082928 130 ntBASIC0.96□□□□□ -2.26
Lima1Q9ERG0 Gm24615-201ENSMUST00000083268 113 ntBASIC0.96□□□□□ -2.26
Lima1Q9ERG0 Gm25683-201ENSMUST00000083940 131 ntBASIC0.96□□□□□ -2.26
Lima1Q9ERG0 Mir544-201ENSMUST00000103813 78 ntBASIC0.95□□□□□ -2.26
Lima1Q9ERG0 Fau-ps1-201ENSMUST00000119675 252 ntBASIC0.95□□□□□ -2.26
Lima1Q9ERG0 Gm25543-201ENSMUST00000122678 312 ntBASIC0.95□□□□□ -2.26
Lima1Q9ERG0 Gm23557-201ENSMUST00000157820 138 ntBASIC0.95□□□□□ -2.26
Lima1Q9ERG0 Gm24726-201ENSMUST00000158232 121 ntBASIC0.95□□□□□ -2.26
Lima1Q9ERG0 Gm17100-201ENSMUST00000168963 272 ntBASIC0.95□□□□□ -2.26
Lima1Q9ERG0 Gm24366-201ENSMUST00000175383 86 ntBASIC0.95□□□□□ -2.26
Lima1Q9ERG0 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC0.95□□□□□ -2.26
Lima1Q9ERG0 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC0.95□□□□□ -2.26
Lima1Q9ERG0 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC0.95□□□□□ -2.26
Lima1Q9ERG0 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC0.95□□□□□ -2.26
Lima1Q9ERG0 Gm27326-201ENSMUST00000183504 95 ntBASIC0.95□□□□□ -2.26
Lima1Q9ERG0 Mir6380-201ENSMUST00000184334 81 ntBASIC0.95□□□□□ -2.26
Lima1Q9ERG0 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
Lima1Q9ERG0 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC0.95□□□□□ -2.26
Lima1Q9ERG0 Gm44491-201ENSMUST00000196794 96 ntBASIC0.95□□□□□ -2.26
Lima1Q9ERG0 AL928567.1-201ENSMUST00000197891 138 ntBASIC0.95□□□□□ -2.26
Lima1Q9ERG0 Mir6962-201ENSMUST00000199512 63 ntBASIC0.95□□□□□ -2.26
Lima1Q9ERG0 AC162387.1-201ENSMUST00000213369 213 ntBASIC0.95□□□□□ -2.26
Lima1Q9ERG0 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
Lima1Q9ERG0 AC192333.2-201ENSMUST00000224771 196 ntBASIC0.95□□□□□ -2.26
Lima1Q9ERG0 AC168056.1-201ENSMUST00000225270 180 ntBASIC0.95□□□□□ -2.26
Lima1Q9ERG0 Gm25357-201ENSMUST00000082745 72 ntBASIC0.95□□□□□ -2.26
Lima1Q9ERG0 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
Lima1Q9ERG0 Gm25507-201ENSMUST00000116981 144 ntBASIC0.94□□□□□ -2.26
Lima1Q9ERG0 Gm23390-201ENSMUST00000157393 106 ntBASIC0.94□□□□□ -2.26
Lima1Q9ERG0 Gm23535-201ENSMUST00000157542 106 ntBASIC0.94□□□□□ -2.26
Lima1Q9ERG0 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC0.94□□□□□ -2.26
Lima1Q9ERG0 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC0.94□□□□□ -2.26
Lima1Q9ERG0 Gm28409-201ENSMUST00000187064 103 ntBASIC0.94□□□□□ -2.26
Lima1Q9ERG0 Gm44320-201ENSMUST00000199276 86 ntBASIC0.94□□□□□ -2.26
Lima1Q9ERG0 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC0.94□□□□□ -2.26
Lima1Q9ERG0 Gm44830-201ENSMUST00000207667 584 ntBASIC0.94□□□□□ -2.26
Lima1Q9ERG0 Gm45815-201ENSMUST00000220241 146 ntBASIC0.94□□□□□ -2.26
Lima1Q9ERG0 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 98.5 ms