Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 AC122905.2-201ENSMUST00000220325 269 ntBASIC1.71□□□□□ -2.14
Scn4aQ9ER60 AC126554.1-201ENSMUST00000222161 271 ntBASIC1.71□□□□□ -2.14
Scn4aQ9ER60 Gm23453-201ENSMUST00000083326 106 ntBASIC1.71□□□□□ -2.14
Scn4aQ9ER60 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC1.71□□□□□ -2.14
Scn4aQ9ER60 Gm13378-201ENSMUST00000117483 336 ntBASIC1.7□□□□□ -2.14
Scn4aQ9ER60 Gm12770-201ENSMUST00000121734 462 ntBASIC1.7□□□□□ -2.14
Scn4aQ9ER60 Gm24594-201ENSMUST00000122502 99 ntBASIC1.7□□□□□ -2.14
Scn4aQ9ER60 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.7□□□□□ -2.14
Scn4aQ9ER60 Gm22843-201ENSMUST00000157710 134 ntBASIC1.7□□□□□ -2.14
Scn4aQ9ER60 Gm23016-201ENSMUST00000158431 62 ntBASIC1.7□□□□□ -2.14
Scn4aQ9ER60 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC1.7□□□□□ -2.14
Scn4aQ9ER60 Gm21737-201ENSMUST00000178112 664 ntBASIC1.7□□□□□ -2.14
Scn4aQ9ER60 Gm21815-201ENSMUST00000178213 664 ntBASIC1.7□□□□□ -2.14
Scn4aQ9ER60 Gm21885-201ENSMUST00000178891 327 ntBASIC1.7□□□□□ -2.14
Scn4aQ9ER60 Gm21729-201ENSMUST00000180058 664 ntBASIC1.7□□□□□ -2.14
Scn4aQ9ER60 Gm21853-201ENSMUST00000180071 664 ntBASIC1.7□□□□□ -2.14
Scn4aQ9ER60 Gm20901-201ENSMUST00000180177 664 ntBASIC1.7□□□□□ -2.14
Scn4aQ9ER60 Gm29495-201ENSMUST00000189319 664 ntBASIC1.7□□□□□ -2.14
Scn4aQ9ER60 Gm28090-201ENSMUST00000189458 664 ntBASIC1.7□□□□□ -2.14
Scn4aQ9ER60 Gm21647-201ENSMUST00000189755 664 ntBASIC1.7□□□□□ -2.14
Scn4aQ9ER60 Gm44429-201ENSMUST00000203542 186 ntBASIC1.7□□□□□ -2.14
Scn4aQ9ER60 Gm45704-201ENSMUST00000212582 403 ntBASIC1.7□□□□□ -2.14
Scn4aQ9ER60 AC120394.1-201ENSMUST00000217153 351 ntBASIC1.7□□□□□ -2.14
Scn4aQ9ER60 Snord68-201ENSMUST00000082516 86 ntBASIC1.7□□□□□ -2.14
Scn4aQ9ER60 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Scn4aQ9ER60 Gm42942-201ENSMUST00000196086 1328 ntBASIC1.7□□□□□ -2.14
Scn4aQ9ER60 Gm13672-201ENSMUST00000117554 459 ntBASIC1.7□□□□□ -2.14
Scn4aQ9ER60 Gm25059-201ENSMUST00000157367 117 ntBASIC1.7□□□□□ -2.14
Scn4aQ9ER60 Gm17148-201ENSMUST00000164702 249 ntBASIC1.7□□□□□ -2.14
Scn4aQ9ER60 Gm25314-201ENSMUST00000178810 79 ntBASIC1.7□□□□□ -2.14
Scn4aQ9ER60 Mir6351-201ENSMUST00000183826 99 ntBASIC1.7□□□□□ -2.14
Scn4aQ9ER60 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC1.7□□□□□ -2.14
Scn4aQ9ER60 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.7□□□□□ -2.14
Scn4aQ9ER60 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Scn4aQ9ER60 Gm20613-201ENSMUST00000175828 345 ntBASIC1.69□□□□□ -2.14
Scn4aQ9ER60 Gm21754-201ENSMUST00000177550 479 ntBASIC1.69□□□□□ -2.14
Scn4aQ9ER60 Gm23660-201ENSMUST00000178362 79 ntBASIC1.69□□□□□ -2.14
Scn4aQ9ER60 Gm24088-201ENSMUST00000179100 79 ntBASIC1.69□□□□□ -2.14
Scn4aQ9ER60 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.69□□□□□ -2.14
Scn4aQ9ER60 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Scn4aQ9ER60 Gm37361-201ENSMUST00000194345 132 ntBASIC1.69□□□□□ -2.14
Scn4aQ9ER60 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC1.69□□□□□ -2.14
Scn4aQ9ER60 AC153526.1-201ENSMUST00000219750 190 ntBASIC1.69□□□□□ -2.14
Scn4aQ9ER60 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Scn4aQ9ER60 Gm3867-201ENSMUST00000086108 279 ntBASIC1.69□□□□□ -2.14
Scn4aQ9ER60 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Scn4aQ9ER60 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.68□□□□□ -2.14
Scn4aQ9ER60 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.68□□□□□ -2.14
Scn4aQ9ER60 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC1.68□□□□□ -2.14
Scn4aQ9ER60 Gm24282-201ENSMUST00000104232 66 ntBASIC1.68□□□□□ -2.14
Scn4aQ9ER60 Gm14392-201ENSMUST00000120332 401 ntBASIC1.68□□□□□ -2.14
Scn4aQ9ER60 Gm14413-201ENSMUST00000122158 408 ntBASIC1.68□□□□□ -2.14
Scn4aQ9ER60 Gm22431-201ENSMUST00000158545 107 ntBASIC1.68□□□□□ -2.14
Scn4aQ9ER60 Gm22800-201ENSMUST00000175627 94 ntBASIC1.68□□□□□ -2.14
Scn4aQ9ER60 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Scn4aQ9ER60 Gm29134-201ENSMUST00000186579 126 ntBASIC1.68□□□□□ -2.14
Scn4aQ9ER60 Gm28337-201ENSMUST00000190425 666 ntBASIC1.68□□□□□ -2.14
Scn4aQ9ER60 Gm31123-201ENSMUST00000192094 666 ntBASIC1.68□□□□□ -2.14
Scn4aQ9ER60 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC1.68□□□□□ -2.14
Scn4aQ9ER60 AC112972.1-201ENSMUST00000227329 365 ntBASIC1.68□□□□□ -2.14
Scn4aQ9ER60 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.68□□□□□ -2.14
Scn4aQ9ER60 Gm25773-201ENSMUST00000116718 127 ntBASIC1.68□□□□□ -2.14
Scn4aQ9ER60 Gm13885-201ENSMUST00000117569 187 ntBASIC1.68□□□□□ -2.14
Scn4aQ9ER60 Gm24573-201ENSMUST00000175499 112 ntBASIC1.68□□□□□ -2.14
Scn4aQ9ER60 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.68□□□□□ -2.14
Scn4aQ9ER60 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Scn4aQ9ER60 Gm27248-201ENSMUST00000184004 166 ntBASIC1.68□□□□□ -2.14
Scn4aQ9ER60 Gm27624-201ENSMUST00000185047 177 ntBASIC1.68□□□□□ -2.14
Scn4aQ9ER60 Gm28848-201ENSMUST00000189984 168 ntBASIC1.68□□□□□ -2.14
Scn4aQ9ER60 Gm42622-201ENSMUST00000197229 355 ntBASIC1.68□□□□□ -2.14
Scn4aQ9ER60 AC102369.1-201ENSMUST00000218415 373 ntBASIC1.68□□□□□ -2.14
Scn4aQ9ER60 Gm40810-201ENSMUST00000219149 253 ntBASIC1.68□□□□□ -2.14
Scn4aQ9ER60 Gm17100-201ENSMUST00000168963 272 ntBASIC1.67□□□□□ -2.14
Scn4aQ9ER60 Gm34073-201ENSMUST00000195736 212 ntBASIC1.67□□□□□ -2.14
Scn4aQ9ER60 Gm43914-201ENSMUST00000203592 594 ntBASIC1.67□□□□□ -2.14
Scn4aQ9ER60 Gm5001-201ENSMUST00000204361 331 ntBASIC1.67□□□□□ -2.14
Scn4aQ9ER60 Gm45402-201ENSMUST00000211796 223 ntBASIC1.67□□□□□ -2.14
Scn4aQ9ER60 AC147240.1-201ENSMUST00000218767 431 ntBASIC1.67□□□□□ -2.14
Scn4aQ9ER60 Gm24165-201ENSMUST00000082718 128 ntBASIC1.67□□□□□ -2.14
Scn4aQ9ER60 Mir743b-201ENSMUST00000104751 77 ntBASIC1.66□□□□□ -2.14
Scn4aQ9ER60 Gm15030-201ENSMUST00000119804 484 ntBASIC1.66□□□□□ -2.14
Scn4aQ9ER60 Gm6985-201ENSMUST00000121255 271 ntBASIC1.66□□□□□ -2.14
Scn4aQ9ER60 Gm23324-201ENSMUST00000157421 131 ntBASIC1.66□□□□□ -2.14
Scn4aQ9ER60 Gm25996-201ENSMUST00000175393 117 ntBASIC1.66□□□□□ -2.14
Scn4aQ9ER60 Gm24388-201ENSMUST00000177872 107 ntBASIC1.66□□□□□ -2.14
Scn4aQ9ER60 Gm42533-201ENSMUST00000196247 157 ntBASIC1.66□□□□□ -2.14
Scn4aQ9ER60 AC164297.5-201ENSMUST00000224365 198 ntBASIC1.66□□□□□ -2.14
Scn4aQ9ER60 AC164304.1-201ENSMUST00000226920 272 ntBASIC1.66□□□□□ -2.14
Scn4aQ9ER60 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.66□□□□□ -2.14
Scn4aQ9ER60 Gm5899-201ENSMUST00000071770 270 ntBASIC1.66□□□□□ -2.14
Scn4aQ9ER60 Gm24805-201ENSMUST00000082931 104 ntBASIC1.66□□□□□ -2.14
Scn4aQ9ER60 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Scn4aQ9ER60 Gm11386-201ENSMUST00000117761 347 ntBASIC1.66□□□□□ -2.14
Scn4aQ9ER60 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC1.66□□□□□ -2.14
Scn4aQ9ER60 Gm22603-201ENSMUST00000157603 96 ntBASIC1.66□□□□□ -2.14
Scn4aQ9ER60 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC1.66□□□□□ -2.14
Scn4aQ9ER60 Gm42570-201ENSMUST00000195937 292 ntBASIC1.66□□□□□ -2.14
Scn4aQ9ER60 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Scn4aQ9ER60 Gm24615-201ENSMUST00000083268 113 ntBASIC1.66□□□□□ -2.14
Scn4aQ9ER60 Gm22972-201ENSMUST00000083297 131 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 203.1 ms