Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm24409-201ENSMUST00000157881 152 ntBASIC1.28□□□□□ -2.2
Cdc40Q9DC48 Gm26335-201ENSMUST00000178449 107 ntBASIC1.28□□□□□ -2.2
Cdc40Q9DC48 Gm25314-201ENSMUST00000178810 79 ntBASIC1.28□□□□□ -2.2
Cdc40Q9DC48 Mir8116-201ENSMUST00000184134 97 ntBASIC1.28□□□□□ -2.2
Cdc40Q9DC48 Gm27517-201ENSMUST00000184347 236 ntBASIC1.28□□□□□ -2.2
Cdc40Q9DC48 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC1.28□□□□□ -2.2
Cdc40Q9DC48 Gm19901-201ENSMUST00000192191 495 ntBASIC1.28□□□□□ -2.2
Cdc40Q9DC48 Gm5034-201ENSMUST00000199115 634 ntBASIC1.28□□□□□ -2.2
Cdc40Q9DC48 Mir1291-201ENSMUST00000199842 117 ntBASIC1.28□□□□□ -2.2
Cdc40Q9DC48 Gm43911-201ENSMUST00000203097 76 ntBASIC1.28□□□□□ -2.2
Cdc40Q9DC48 Gm43993-201ENSMUST00000203972 247 ntBASIC1.28□□□□□ -2.2
Cdc40Q9DC48 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC1.28□□□□□ -2.2
Cdc40Q9DC48 Gm45907-201ENSMUST00000213023 193 ntBASIC1.28□□□□□ -2.2
Cdc40Q9DC48 AC116589.1-201ENSMUST00000220634 327 ntBASIC1.28□□□□□ -2.2
Cdc40Q9DC48 Gm20102-201ENSMUST00000222445 220 ntBASIC1.28□□□□□ -2.2
Cdc40Q9DC48 AC114916.1-201ENSMUST00000228465 494 ntBASIC1.28□□□□□ -2.2
Cdc40Q9DC48 Snora3-201ENSMUST00000083082 132 ntBASIC1.28□□□□□ -2.2
Cdc40Q9DC48 Snora34-201ENSMUST00000083402 138 ntBASIC1.28□□□□□ -2.2
Cdc40Q9DC48 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.28□□□□□ -2.2
Cdc40Q9DC48 Gm26500-201ENSMUST00000101867 106 ntBASIC1.27□□□□□ -2.21
Cdc40Q9DC48 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
Cdc40Q9DC48 Gm24282-201ENSMUST00000104232 66 ntBASIC1.27□□□□□ -2.21
Cdc40Q9DC48 Gm11891-201ENSMUST00000121241 619 ntBASIC1.27□□□□□ -2.21
Cdc40Q9DC48 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
Cdc40Q9DC48 Gm22228-201ENSMUST00000157364 101 ntBASIC1.27□□□□□ -2.21
Cdc40Q9DC48 Gm25914-201ENSMUST00000157618 153 ntBASIC1.27□□□□□ -2.21
Cdc40Q9DC48 Gm23854-201ENSMUST00000158378 108 ntBASIC1.27□□□□□ -2.21
Cdc40Q9DC48 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.27□□□□□ -2.21
Cdc40Q9DC48 Gm22510-201ENSMUST00000179304 79 ntBASIC1.27□□□□□ -2.21
Cdc40Q9DC48 Gm26336-201ENSMUST00000179449 79 ntBASIC1.27□□□□□ -2.21
Cdc40Q9DC48 Gm24390-201ENSMUST00000179578 62 ntBASIC1.27□□□□□ -2.21
Cdc40Q9DC48 Gm26390-201ENSMUST00000179628 79 ntBASIC1.27□□□□□ -2.21
Cdc40Q9DC48 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Cdc40Q9DC48 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC1.27□□□□□ -2.21
Cdc40Q9DC48 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.27□□□□□ -2.21
Cdc40Q9DC48 Snord14a-201ENSMUST00000082807 87 ntBASIC1.27□□□□□ -2.21
Cdc40Q9DC48 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.27□□□□□ -2.21
Cdc40Q9DC48 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
Cdc40Q9DC48 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
Cdc40Q9DC48 Gm13475-201ENSMUST00000119290 234 ntBASIC1.26□□□□□ -2.21
Cdc40Q9DC48 Gm6829-201ENSMUST00000119858 360 ntBASIC1.26□□□□□ -2.21
Cdc40Q9DC48 Gm11359-201ENSMUST00000120039 567 ntBASIC1.26□□□□□ -2.21
Cdc40Q9DC48 Gm15899-201ENSMUST00000128586 238 ntBASIC1.26□□□□□ -2.21
Cdc40Q9DC48 Gm23120-201ENSMUST00000157654 287 ntBASIC1.26□□□□□ -2.21
Cdc40Q9DC48 Gm25371-201ENSMUST00000158162 101 ntBASIC1.26□□□□□ -2.21
Cdc40Q9DC48 Gm26405-201ENSMUST00000158495 100 ntBASIC1.26□□□□□ -2.21
Cdc40Q9DC48 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.26□□□□□ -2.21
Cdc40Q9DC48 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC1.26□□□□□ -2.21
Cdc40Q9DC48 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC1.26□□□□□ -2.21
Cdc40Q9DC48 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC1.26□□□□□ -2.21
Cdc40Q9DC48 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC1.26□□□□□ -2.21
Cdc40Q9DC48 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC1.26□□□□□ -2.21
Cdc40Q9DC48 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC1.26□□□□□ -2.21
Cdc40Q9DC48 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC1.26□□□□□ -2.21
Cdc40Q9DC48 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC1.26□□□□□ -2.21
Cdc40Q9DC48 Gm26180-201ENSMUST00000179942 107 ntBASIC1.26□□□□□ -2.21
Cdc40Q9DC48 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
Cdc40Q9DC48 Gm27313-201ENSMUST00000183500 142 ntBASIC1.26□□□□□ -2.21
Cdc40Q9DC48 Gm28200-201ENSMUST00000187778 315 ntBASIC1.26□□□□□ -2.21
Cdc40Q9DC48 Gm29378-201ENSMUST00000188723 315 ntBASIC1.26□□□□□ -2.21
Cdc40Q9DC48 Gm28912-201ENSMUST00000189001 234 ntBASIC1.26□□□□□ -2.21
Cdc40Q9DC48 Gm28909-201ENSMUST00000189406 315 ntBASIC1.26□□□□□ -2.21
Cdc40Q9DC48 Gm28506-201ENSMUST00000189937 150 ntBASIC1.26□□□□□ -2.21
Cdc40Q9DC48 AC126267.1-201ENSMUST00000214282 284 ntBASIC1.26□□□□□ -2.21
Cdc40Q9DC48 Gm18696-201ENSMUST00000220103 274 ntBASIC1.26□□□□□ -2.21
Cdc40Q9DC48 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.26□□□□□ -2.21
Cdc40Q9DC48 AC112972.1-201ENSMUST00000227329 365 ntBASIC1.26□□□□□ -2.21
Cdc40Q9DC48 Gm25357-201ENSMUST00000082745 72 ntBASIC1.26□□□□□ -2.21
Cdc40Q9DC48 Gm25579-201ENSMUST00000083407 106 ntBASIC1.26□□□□□ -2.21
Cdc40Q9DC48 Gm23097-201ENSMUST00000083448 105 ntBASIC1.26□□□□□ -2.21
Cdc40Q9DC48 Gm24338-201ENSMUST00000104205 127 ntBASIC1.25□□□□□ -2.21
Cdc40Q9DC48 Gm11386-201ENSMUST00000117761 347 ntBASIC1.25□□□□□ -2.21
Cdc40Q9DC48 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.25□□□□□ -2.21
Cdc40Q9DC48 Gm11857-201ENSMUST00000119817 324 ntBASIC1.25□□□□□ -2.21
Cdc40Q9DC48 Igkv17-134-201ENSMUST00000168310 348 ntBASIC1.25□□□□□ -2.21
Cdc40Q9DC48 Mir3098-201ENSMUST00000175416 87 ntBASIC1.25□□□□□ -2.21
Cdc40Q9DC48 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.25□□□□□ -2.21
Cdc40Q9DC48 Gm28995-201ENSMUST00000186625 261 ntBASIC1.25□□□□□ -2.21
Cdc40Q9DC48 Gm9156-201ENSMUST00000189660 463 ntBASIC1.25□□□□□ -2.21
Cdc40Q9DC48 Gm43406-201ENSMUST00000200356 334 ntBASIC1.25□□□□□ -2.21
Cdc40Q9DC48 Gm45402-201ENSMUST00000211796 223 ntBASIC1.25□□□□□ -2.21
Cdc40Q9DC48 Gm21937-201ENSMUST00000222825 218 ntBASIC1.25□□□□□ -2.21
Cdc40Q9DC48 Gm25896-201ENSMUST00000083713 136 ntBASIC1.25□□□□□ -2.21
Cdc40Q9DC48 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Cdc40Q9DC48 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.24□□□□□ -2.21
Cdc40Q9DC48 Gm25759-201ENSMUST00000103988 129 ntBASIC1.24□□□□□ -2.21
Cdc40Q9DC48 Gm23015-201ENSMUST00000104145 128 ntBASIC1.24□□□□□ -2.21
Cdc40Q9DC48 Gm22656-201ENSMUST00000104199 171 ntBASIC1.24□□□□□ -2.21
Cdc40Q9DC48 Gm14296-202ENSMUST00000108931 750 ntBASIC1.24□□□□□ -2.21
Cdc40Q9DC48 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC1.24□□□□□ -2.21
Cdc40Q9DC48 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC1.24□□□□□ -2.21
Cdc40Q9DC48 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC1.24□□□□□ -2.21
Cdc40Q9DC48 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC1.24□□□□□ -2.21
Cdc40Q9DC48 Gm23656-201ENSMUST00000122626 112 ntBASIC1.24□□□□□ -2.21
Cdc40Q9DC48 Gm22027-201ENSMUST00000122737 127 ntBASIC1.24□□□□□ -2.21
Cdc40Q9DC48 Gm24551-201ENSMUST00000158645 92 ntBASIC1.24□□□□□ -2.21
Cdc40Q9DC48 Gm17148-201ENSMUST00000164702 249 ntBASIC1.24□□□□□ -2.21
Cdc40Q9DC48 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC1.24□□□□□ -2.21
Cdc40Q9DC48 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Cdc40Q9DC48 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms