Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC2.11□□□□□ -2.07
Vps28Q9D1C8 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC2.11□□□□□ -2.07
Vps28Q9D1C8 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC2.11□□□□□ -2.07
Vps28Q9D1C8 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC2.11□□□□□ -2.07
Vps28Q9D1C8 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC2.11□□□□□ -2.07
Vps28Q9D1C8 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC2.11□□□□□ -2.07
Vps28Q9D1C8 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC2.11□□□□□ -2.07
Vps28Q9D1C8 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC2.11□□□□□ -2.07
Vps28Q9D1C8 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Vps28Q9D1C8 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC2.11□□□□□ -2.07
Vps28Q9D1C8 CT030687.1-201ENSMUST00000221854 162 ntBASIC2.11□□□□□ -2.07
Vps28Q9D1C8 AC167140.1-201ENSMUST00000224710 403 ntBASIC2.11□□□□□ -2.07
Vps28Q9D1C8 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.11□□□□□ -2.07
Vps28Q9D1C8 Mir322-201ENSMUST00000083484 95 ntBASIC2.11□□□□□ -2.07
Vps28Q9D1C8 Mir429-201ENSMUST00000083493 83 ntBASIC2.11□□□□□ -2.07
Vps28Q9D1C8 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.1□□□□□ -2.07
Vps28Q9D1C8 Gm23015-201ENSMUST00000104145 128 ntBASIC2.1□□□□□ -2.07
Vps28Q9D1C8 Gm15526-201ENSMUST00000112504 204 ntBASIC2.1□□□□□ -2.07
Vps28Q9D1C8 Gm12235-201ENSMUST00000118596 170 ntBASIC2.1□□□□□ -2.07
Vps28Q9D1C8 Gm22510-201ENSMUST00000179304 79 ntBASIC2.1□□□□□ -2.07
Vps28Q9D1C8 Gm26336-201ENSMUST00000179449 79 ntBASIC2.1□□□□□ -2.07
Vps28Q9D1C8 Gm26390-201ENSMUST00000179628 79 ntBASIC2.1□□□□□ -2.07
Vps28Q9D1C8 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC2.1□□□□□ -2.07
Vps28Q9D1C8 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC2.1□□□□□ -2.07
Vps28Q9D1C8 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Vps28Q9D1C8 Gm37338-201ENSMUST00000191986 127 ntBASIC2.1□□□□□ -2.07
Vps28Q9D1C8 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Vps28Q9D1C8 Gm38041-201ENSMUST00000194445 661 ntBASIC2.1□□□□□ -2.07
Vps28Q9D1C8 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC2.1□□□□□ -2.07
Vps28Q9D1C8 Gm5899-201ENSMUST00000071770 270 ntBASIC2.1□□□□□ -2.07
Vps28Q9D1C8 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC2.1□□□□□ -2.07
Vps28Q9D1C8 Gm25402-201ENSMUST00000082966 131 ntBASIC2.1□□□□□ -2.07
Vps28Q9D1C8 Mir32-201ENSMUST00000083610 70 ntBASIC2.1□□□□□ -2.07
Vps28Q9D1C8 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Vps28Q9D1C8 Gm13992-201ENSMUST00000120558 156 ntBASIC2.09□□□□□ -2.07
Vps28Q9D1C8 Gm25805-201ENSMUST00000122788 108 ntBASIC2.09□□□□□ -2.07
Vps28Q9D1C8 Gm15692-201ENSMUST00000152173 352 ntBASIC2.09□□□□□ -2.07
Vps28Q9D1C8 Gm25460-201ENSMUST00000157954 127 ntBASIC2.09□□□□□ -2.07
Vps28Q9D1C8 Gm22768-201ENSMUST00000158366 153 ntBASIC2.09□□□□□ -2.07
Vps28Q9D1C8 Gm23813-201ENSMUST00000175153 77 ntBASIC2.09□□□□□ -2.07
Vps28Q9D1C8 Gm17067-202ENSMUST00000180131 123 ntBASIC2.09□□□□□ -2.07
Vps28Q9D1C8 Gm25284-201ENSMUST00000180345 141 ntBASIC2.09□□□□□ -2.07
Vps28Q9D1C8 Gm27271-201ENSMUST00000183509 170 ntBASIC2.09□□□□□ -2.07
Vps28Q9D1C8 Gm27979-201ENSMUST00000185126 56 ntBASIC2.09□□□□□ -2.07
Vps28Q9D1C8 Gm43578-201ENSMUST00000201250 459 ntBASIC2.09□□□□□ -2.07
Vps28Q9D1C8 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.09□□□□□ -2.07
Vps28Q9D1C8 AC132954.1-201ENSMUST00000221017 342 ntBASIC2.09□□□□□ -2.07
Vps28Q9D1C8 AL590614.1-201ENSMUST00000226037 268 ntBASIC2.09□□□□□ -2.07
Vps28Q9D1C8 Mir30d-201ENSMUST00000083503 82 ntBASIC2.09□□□□□ -2.07
Vps28Q9D1C8 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
Vps28Q9D1C8 Gm43706-201ENSMUST00000198767 2652 ntBASIC2.08□□□□□ -2.08
Vps28Q9D1C8 n-R5s158-201ENSMUST00000104095 118 ntBASIC2.08□□□□□ -2.08
Vps28Q9D1C8 Gm25485-201ENSMUST00000104120 132 ntBASIC2.08□□□□□ -2.08
Vps28Q9D1C8 Gm22032-201ENSMUST00000116946 116 ntBASIC2.08□□□□□ -2.08
Vps28Q9D1C8 Gm11854-201ENSMUST00000117839 446 ntBASIC2.08□□□□□ -2.08
Vps28Q9D1C8 Gm14782-201ENSMUST00000120151 195 ntBASIC2.08□□□□□ -2.08
Vps28Q9D1C8 Gm22945-201ENSMUST00000158557 157 ntBASIC2.08□□□□□ -2.08
Vps28Q9D1C8 Mir1936-201ENSMUST00000158699 93 ntBASIC2.08□□□□□ -2.08
Vps28Q9D1C8 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.08□□□□□ -2.08
Vps28Q9D1C8 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Vps28Q9D1C8 Mir6997-201ENSMUST00000184313 71 ntBASIC2.08□□□□□ -2.08
Vps28Q9D1C8 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC2.08□□□□□ -2.08
Vps28Q9D1C8 Gm43250-201ENSMUST00000196536 273 ntBASIC2.08□□□□□ -2.08
Vps28Q9D1C8 Gm43505-201ENSMUST00000200579 139 ntBASIC2.08□□□□□ -2.08
Vps28Q9D1C8 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.08□□□□□ -2.08
Vps28Q9D1C8 Gm24625-201ENSMUST00000082622 130 ntBASIC2.08□□□□□ -2.08
Vps28Q9D1C8 Gm23412-201ENSMUST00000083017 107 ntBASIC2.08□□□□□ -2.08
Vps28Q9D1C8 Gm24615-201ENSMUST00000083268 113 ntBASIC2.08□□□□□ -2.08
Vps28Q9D1C8 Gm24765-201ENSMUST00000083691 103 ntBASIC2.08□□□□□ -2.08
Vps28Q9D1C8 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Vps28Q9D1C8 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Vps28Q9D1C8 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Vps28Q9D1C8 AC160115.1-201ENSMUST00000224678 1574 ntBASIC2.07□□□□□ -2.08
Vps28Q9D1C8 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Vps28Q9D1C8 Gm24275-201ENSMUST00000116780 146 ntBASIC2.07□□□□□ -2.08
Vps28Q9D1C8 Gm25781-201ENSMUST00000122527 84 ntBASIC2.07□□□□□ -2.08
Vps28Q9D1C8 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.07□□□□□ -2.08
Vps28Q9D1C8 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.07□□□□□ -2.08
Vps28Q9D1C8 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Vps28Q9D1C8 Gm23024-201ENSMUST00000158770 292 ntBASIC2.07□□□□□ -2.08
Vps28Q9D1C8 Gm24737-201ENSMUST00000158861 100 ntBASIC2.07□□□□□ -2.08
Vps28Q9D1C8 Gm23090-201ENSMUST00000177331 78 ntBASIC2.07□□□□□ -2.08
Vps28Q9D1C8 Mir7016-201ENSMUST00000184308 72 ntBASIC2.07□□□□□ -2.08
Vps28Q9D1C8 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC2.07□□□□□ -2.08
Vps28Q9D1C8 Gm36891-201ENSMUST00000191995 655 ntBASIC2.07□□□□□ -2.08
Vps28Q9D1C8 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC2.07□□□□□ -2.08
Vps28Q9D1C8 AC173345.2-201ENSMUST00000222795 153 ntBASIC2.07□□□□□ -2.08
Vps28Q9D1C8 AC183092.1-201ENSMUST00000224301 153 ntBASIC2.07□□□□□ -2.08
Vps28Q9D1C8 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2.07□□□□□ -2.08
Vps28Q9D1C8 AC161250.2-201ENSMUST00000215114 3107 ntBASIC2.07□□□□□ -2.08
Vps28Q9D1C8 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Vps28Q9D1C8 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Vps28Q9D1C8 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Vps28Q9D1C8 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.06□□□□□ -2.08
Vps28Q9D1C8 Gm14298-201ENSMUST00000139032 237 ntBASIC2.06□□□□□ -2.08
Vps28Q9D1C8 Gm16356-201ENSMUST00000143300 169 ntBASIC2.06□□□□□ -2.08
Vps28Q9D1C8 Gm23262-201ENSMUST00000158323 168 ntBASIC2.06□□□□□ -2.08
Vps28Q9D1C8 Gm23342-201ENSMUST00000158958 115 ntBASIC2.06□□□□□ -2.08
Vps28Q9D1C8 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC2.06□□□□□ -2.08
Vps28Q9D1C8 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 112.9 ms