Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Mir376a-201ENSMUST00000197584 68 ntBASIC2.75□□□□□ -1.97
Ddx56Q9D0R4 Gm44526-201ENSMUST00000204664 121 ntBASIC2.75□□□□□ -1.97
Ddx56Q9D0R4 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.75□□□□□ -1.97
Ddx56Q9D0R4 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.75□□□□□ -1.97
Ddx56Q9D0R4 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.75□□□□□ -1.97
Ddx56Q9D0R4 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.75□□□□□ -1.97
Ddx56Q9D0R4 AC154515.1-201ENSMUST00000226085 2841 ntBASIC2.74□□□□□ -1.97
Ddx56Q9D0R4 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
Ddx56Q9D0R4 Gm14748-201ENSMUST00000119819 411 ntBASIC2.74□□□□□ -1.97
Ddx56Q9D0R4 Gm8121-201ENSMUST00000153583 499 ntBASIC2.74□□□□□ -1.97
Ddx56Q9D0R4 Gm25392-201ENSMUST00000157335 297 ntBASIC2.74□□□□□ -1.97
Ddx56Q9D0R4 Gm23324-201ENSMUST00000157421 131 ntBASIC2.74□□□□□ -1.97
Ddx56Q9D0R4 Mir3965-201ENSMUST00000175570 69 ntBASIC2.74□□□□□ -1.97
Ddx56Q9D0R4 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC2.74□□□□□ -1.97
Ddx56Q9D0R4 Gm22510-201ENSMUST00000179304 79 ntBASIC2.74□□□□□ -1.97
Ddx56Q9D0R4 Gm26336-201ENSMUST00000179449 79 ntBASIC2.74□□□□□ -1.97
Ddx56Q9D0R4 Gm26390-201ENSMUST00000179628 79 ntBASIC2.74□□□□□ -1.97
Ddx56Q9D0R4 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.74□□□□□ -1.97
Ddx56Q9D0R4 AC150314.1-201ENSMUST00000214798 238 ntBASIC2.74□□□□□ -1.97
Ddx56Q9D0R4 Gm46389-201ENSMUST00000223199 392 ntBASIC2.74□□□□□ -1.97
Ddx56Q9D0R4 AC115735.2-201ENSMUST00000227135 351 ntBASIC2.74□□□□□ -1.97
Ddx56Q9D0R4 Gm22249-201ENSMUST00000082485 136 ntBASIC2.74□□□□□ -1.97
Ddx56Q9D0R4 Snord104-201ENSMUST00000083192 70 ntBASIC2.74□□□□□ -1.97
Ddx56Q9D0R4 Mir93-201ENSMUST00000083593 88 ntBASIC2.74□□□□□ -1.97
Ddx56Q9D0R4 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
Ddx56Q9D0R4 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC2.74□□□□□ -1.97
Ddx56Q9D0R4 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
Ddx56Q9D0R4 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.74□□□□□ -1.97
Ddx56Q9D0R4 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Ddx56Q9D0R4 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Ddx56Q9D0R4 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.73□□□□□ -1.97
Ddx56Q9D0R4 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Ddx56Q9D0R4 Gm22782-201ENSMUST00000104082 132 ntBASIC2.73□□□□□ -1.97
Ddx56Q9D0R4 Gm11388-201ENSMUST00000120908 159 ntBASIC2.73□□□□□ -1.97
Ddx56Q9D0R4 Gm24909-201ENSMUST00000157290 280 ntBASIC2.73□□□□□ -1.97
Ddx56Q9D0R4 AC164086.1-201ENSMUST00000221038 289 ntBASIC2.73□□□□□ -1.97
Ddx56Q9D0R4 Gm10025-201ENSMUST00000079568 372 ntBASIC2.73□□□□□ -1.97
Ddx56Q9D0R4 Gm25788-201ENSMUST00000082721 131 ntBASIC2.73□□□□□ -1.97
Ddx56Q9D0R4 Mir340-201ENSMUST00000083483 98 ntBASIC2.73□□□□□ -1.97
Ddx56Q9D0R4 Mir300-201ENSMUST00000083485 79 ntBASIC2.73□□□□□ -1.97
Ddx56Q9D0R4 Gm23847-201ENSMUST00000083829 110 ntBASIC2.73□□□□□ -1.97
Ddx56Q9D0R4 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.73□□□□□ -1.97
Ddx56Q9D0R4 Gm26341-201ENSMUST00000104561 134 ntBASIC2.72□□□□□ -1.97
Ddx56Q9D0R4 Gm14883-201ENSMUST00000120179 157 ntBASIC2.72□□□□□ -1.97
Ddx56Q9D0R4 Gm22554-201ENSMUST00000157798 147 ntBASIC2.72□□□□□ -1.97
Ddx56Q9D0R4 Gm27249-201ENSMUST00000185049 328 ntBASIC2.72□□□□□ -1.97
Ddx56Q9D0R4 Gm3724-201ENSMUST00000197957 349 ntBASIC2.72□□□□□ -1.97
Ddx56Q9D0R4 Gm44977-201ENSMUST00000205283 420 ntBASIC2.72□□□□□ -1.97
Ddx56Q9D0R4 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Ddx56Q9D0R4 Gm46997-201ENSMUST00000222108 217 ntBASIC2.72□□□□□ -1.97
Ddx56Q9D0R4 AC173482.4-201ENSMUST00000225096 348 ntBASIC2.72□□□□□ -1.97
Ddx56Q9D0R4 CT010454.1-201ENSMUST00000225975 265 ntBASIC2.72□□□□□ -1.97
Ddx56Q9D0R4 Gm25930-201ENSMUST00000082785 107 ntBASIC2.72□□□□□ -1.97
Ddx56Q9D0R4 Gm23451-201ENSMUST00000083328 122 ntBASIC2.72□□□□□ -1.97
Ddx56Q9D0R4 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
Ddx56Q9D0R4 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.71□□□□□ -1.98
Ddx56Q9D0R4 Gm16021-201ENSMUST00000121176 219 ntBASIC2.71□□□□□ -1.98
Ddx56Q9D0R4 Gm25373-201ENSMUST00000158156 115 ntBASIC2.71□□□□□ -1.98
Ddx56Q9D0R4 Gm27505-201ENSMUST00000185071 110 ntBASIC2.71□□□□□ -1.98
Ddx56Q9D0R4 Gm28724-201ENSMUST00000186149 625 ntBASIC2.71□□□□□ -1.98
Ddx56Q9D0R4 Gm28453-203ENSMUST00000187041 189 ntBASIC2.71□□□□□ -1.98
Ddx56Q9D0R4 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC2.71□□□□□ -1.98
Ddx56Q9D0R4 Gm37557-201ENSMUST00000191640 139 ntBASIC2.71□□□□□ -1.98
Ddx56Q9D0R4 Gm2719-201ENSMUST00000191929 444 ntBASIC2.71□□□□□ -1.98
Ddx56Q9D0R4 Gm42774-201ENSMUST00000198854 283 ntBASIC2.71□□□□□ -1.98
Ddx56Q9D0R4 Gm45879-201ENSMUST00000212521 392 ntBASIC2.71□□□□□ -1.98
Ddx56Q9D0R4 Gm25141-201ENSMUST00000083177 107 ntBASIC2.71□□□□□ -1.98
Ddx56Q9D0R4 Gm22154-201ENSMUST00000083844 131 ntBASIC2.71□□□□□ -1.98
Ddx56Q9D0R4 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Ddx56Q9D0R4 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Ddx56Q9D0R4 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.7□□□□□ -1.98
Ddx56Q9D0R4 n-R5s158-201ENSMUST00000104095 118 ntBASIC2.7□□□□□ -1.98
Ddx56Q9D0R4 n-R5s67-201ENSMUST00000104336 114 ntBASIC2.7□□□□□ -1.98
Ddx56Q9D0R4 Gm14001-201ENSMUST00000118847 247 ntBASIC2.7□□□□□ -1.98
Ddx56Q9D0R4 Gm11471-201ENSMUST00000121824 198 ntBASIC2.7□□□□□ -1.98
Ddx56Q9D0R4 Gm22338-201ENSMUST00000157715 129 ntBASIC2.7□□□□□ -1.98
Ddx56Q9D0R4 Gm24958-201ENSMUST00000158009 97 ntBASIC2.7□□□□□ -1.98
Ddx56Q9D0R4 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
Ddx56Q9D0R4 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC2.7□□□□□ -1.98
Ddx56Q9D0R4 Gm7958-201ENSMUST00000178255 468 ntBASIC2.7□□□□□ -1.98
Ddx56Q9D0R4 Gm24390-201ENSMUST00000179578 62 ntBASIC2.7□□□□□ -1.98
Ddx56Q9D0R4 Gm7950-201ENSMUST00000179633 468 ntBASIC2.7□□□□□ -1.98
Ddx56Q9D0R4 Gm27379-201ENSMUST00000183730 123 ntBASIC2.7□□□□□ -1.98
Ddx56Q9D0R4 Mir7k-201ENSMUST00000184115 110 ntBASIC2.7□□□□□ -1.98
Ddx56Q9D0R4 Gm45445-201ENSMUST00000209586 232 ntBASIC2.7□□□□□ -1.98
Ddx56Q9D0R4 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC2.7□□□□□ -1.98
Ddx56Q9D0R4 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Ddx56Q9D0R4 Gm24966-201ENSMUST00000082443 79 ntBASIC2.7□□□□□ -1.98
Ddx56Q9D0R4 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.7□□□□□ -1.98
Ddx56Q9D0R4 Gm22538-201ENSMUST00000158169 299 ntBASIC2.69□□□□□ -1.98
Ddx56Q9D0R4 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.69□□□□□ -1.98
Ddx56Q9D0R4 Gm44393-201ENSMUST00000197418 138 ntBASIC2.69□□□□□ -1.98
Ddx56Q9D0R4 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.69□□□□□ -1.98
Ddx56Q9D0R4 Gm9795-201ENSMUST00000062156 693 ntBASIC2.69□□□□□ -1.98
Ddx56Q9D0R4 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
Ddx56Q9D0R4 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
Ddx56Q9D0R4 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
Ddx56Q9D0R4 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.68□□□□□ -1.98
Ddx56Q9D0R4 Gm22984-201ENSMUST00000122751 122 ntBASIC2.68□□□□□ -1.98
Ddx56Q9D0R4 Gm23982-201ENSMUST00000157141 106 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 128.5 ms