Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.05□□□□□ -2.08
Ddx28Q9CWT6 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.05□□□□□ -2.08
Ddx28Q9CWT6 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Ddx28Q9CWT6 Mir1b-201ENSMUST00000117012 122 ntBASIC2.04□□□□□ -2.08
Ddx28Q9CWT6 Gm14775-201ENSMUST00000122089 310 ntBASIC2.04□□□□□ -2.08
Ddx28Q9CWT6 Gm24630-201ENSMUST00000122768 106 ntBASIC2.04□□□□□ -2.08
Ddx28Q9CWT6 Gm25910-201ENSMUST00000157620 140 ntBASIC2.04□□□□□ -2.08
Ddx28Q9CWT6 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC2.04□□□□□ -2.08
Ddx28Q9CWT6 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.04□□□□□ -2.08
Ddx28Q9CWT6 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.04□□□□□ -2.08
Ddx28Q9CWT6 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.04□□□□□ -2.08
Ddx28Q9CWT6 Snord7-201ENSMUST00000083781 97 ntBASIC2.04□□□□□ -2.08
Ddx28Q9CWT6 Gm26175-201ENSMUST00000083794 131 ntBASIC2.04□□□□□ -2.08
Ddx28Q9CWT6 Gm4746-201ENSMUST00000120395 2406 ntBASIC2.03□□□□□ -2.08
Ddx28Q9CWT6 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Ddx28Q9CWT6 Gm11322-201ENSMUST00000118095 435 ntBASIC2.03□□□□□ -2.08
Ddx28Q9CWT6 Gm12837-201ENSMUST00000120131 373 ntBASIC2.03□□□□□ -2.08
Ddx28Q9CWT6 Gm25961-201ENSMUST00000157174 135 ntBASIC2.03□□□□□ -2.08
Ddx28Q9CWT6 Mir28b-201ENSMUST00000175399 80 ntBASIC2.03□□□□□ -2.08
Ddx28Q9CWT6 Gm25450-201ENSMUST00000179144 107 ntBASIC2.03□□□□□ -2.08
Ddx28Q9CWT6 Gm45296-201ENSMUST00000209625 205 ntBASIC2.03□□□□□ -2.08
Ddx28Q9CWT6 Gm25078-201ENSMUST00000082530 107 ntBASIC2.03□□□□□ -2.08
Ddx28Q9CWT6 Gm24977-201ENSMUST00000083106 163 ntBASIC2.03□□□□□ -2.08
Ddx28Q9CWT6 Mir29c-201ENSMUST00000083614 88 ntBASIC2.03□□□□□ -2.08
Ddx28Q9CWT6 Gm24764-201ENSMUST00000083686 199 ntBASIC2.03□□□□□ -2.08
Ddx28Q9CWT6 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Ddx28Q9CWT6 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
Ddx28Q9CWT6 Gm22193-201ENSMUST00000116868 76 ntBASIC2.02□□□□□ -2.09
Ddx28Q9CWT6 Gm6829-201ENSMUST00000119858 360 ntBASIC2.02□□□□□ -2.09
Ddx28Q9CWT6 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.02□□□□□ -2.09
Ddx28Q9CWT6 Gm25863-201ENSMUST00000158249 329 ntBASIC2.02□□□□□ -2.09
Ddx28Q9CWT6 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC2.02□□□□□ -2.09
Ddx28Q9CWT6 Gm25996-201ENSMUST00000175393 117 ntBASIC2.02□□□□□ -2.09
Ddx28Q9CWT6 Mir6995-201ENSMUST00000183658 71 ntBASIC2.02□□□□□ -2.09
Ddx28Q9CWT6 Gm27997-201ENSMUST00000184942 69 ntBASIC2.02□□□□□ -2.09
Ddx28Q9CWT6 Gm29147-201ENSMUST00000186846 315 ntBASIC2.02□□□□□ -2.09
Ddx28Q9CWT6 Gm29227-201ENSMUST00000187139 315 ntBASIC2.02□□□□□ -2.09
Ddx28Q9CWT6 Gm29034-201ENSMUST00000188099 315 ntBASIC2.02□□□□□ -2.09
Ddx28Q9CWT6 Gm28160-201ENSMUST00000191229 315 ntBASIC2.02□□□□□ -2.09
Ddx28Q9CWT6 Gm37801-201ENSMUST00000194754 274 ntBASIC2.02□□□□□ -2.09
Ddx28Q9CWT6 Gm37129-201ENSMUST00000195791 315 ntBASIC2.02□□□□□ -2.09
Ddx28Q9CWT6 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC2.02□□□□□ -2.09
Ddx28Q9CWT6 Gm45616-201ENSMUST00000211711 319 ntBASIC2.02□□□□□ -2.09
Ddx28Q9CWT6 AC145736.2-201ENSMUST00000216305 365 ntBASIC2.02□□□□□ -2.09
Ddx28Q9CWT6 AC154552.1-201ENSMUST00000222969 202 ntBASIC2.02□□□□□ -2.09
Ddx28Q9CWT6 Gm22299-201ENSMUST00000082663 136 ntBASIC2.02□□□□□ -2.09
Ddx28Q9CWT6 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Ddx28Q9CWT6 Gm42536-201ENSMUST00000197562 1613 ntBASIC2.02□□□□□ -2.09
Ddx28Q9CWT6 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Ddx28Q9CWT6 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Ddx28Q9CWT6 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Ddx28Q9CWT6 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.01□□□□□ -2.09
Ddx28Q9CWT6 Gm23472-201ENSMUST00000101806 191 ntBASIC2.01□□□□□ -2.09
Ddx28Q9CWT6 Gm3788-201ENSMUST00000119949 136 ntBASIC2.01□□□□□ -2.09
Ddx28Q9CWT6 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Ddx28Q9CWT6 Gm22814-201ENSMUST00000157452 104 ntBASIC2.01□□□□□ -2.09
Ddx28Q9CWT6 Gm16326-201ENSMUST00000162843 414 ntBASIC2.01□□□□□ -2.09
Ddx28Q9CWT6 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Ddx28Q9CWT6 Gm20613-201ENSMUST00000175828 345 ntBASIC2.01□□□□□ -2.09
Ddx28Q9CWT6 Gm24497-201ENSMUST00000177868 191 ntBASIC2.01□□□□□ -2.09
Ddx28Q9CWT6 Gm25939-201ENSMUST00000179876 191 ntBASIC2.01□□□□□ -2.09
Ddx28Q9CWT6 Gm27399-201ENSMUST00000184250 78 ntBASIC2.01□□□□□ -2.09
Ddx28Q9CWT6 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.01□□□□□ -2.09
Ddx28Q9CWT6 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Ddx28Q9CWT6 Gm42807-201ENSMUST00000200141 329 ntBASIC2.01□□□□□ -2.09
Ddx28Q9CWT6 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.01□□□□□ -2.09
Ddx28Q9CWT6 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Ddx28Q9CWT6 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Ddx28Q9CWT6 Gm23444-201ENSMUST00000082922 191 ntBASIC2.01□□□□□ -2.09
Ddx28Q9CWT6 Gm22972-201ENSMUST00000083297 131 ntBASIC2.01□□□□□ -2.09
Ddx28Q9CWT6 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC2.01□□□□□ -2.09
Ddx28Q9CWT6 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.01□□□□□ -2.09
Ddx28Q9CWT6 Gm42770-201ENSMUST00000199657 4155 ntBASIC2□□□□□ -2.09
Ddx28Q9CWT6 Gm11854-201ENSMUST00000117839 446 ntBASIC2□□□□□ -2.09
Ddx28Q9CWT6 Gm14748-201ENSMUST00000119819 411 ntBASIC2□□□□□ -2.09
Ddx28Q9CWT6 Gm13725-201ENSMUST00000122139 207 ntBASIC2□□□□□ -2.09
Ddx28Q9CWT6 Gm23858-201ENSMUST00000158384 106 ntBASIC2□□□□□ -2.09
Ddx28Q9CWT6 Gm24501-201ENSMUST00000158452 62 ntBASIC2□□□□□ -2.09
Ddx28Q9CWT6 Gm25707-201ENSMUST00000175120 96 ntBASIC2□□□□□ -2.09
Ddx28Q9CWT6 Gm2719-201ENSMUST00000191929 444 ntBASIC2□□□□□ -2.09
Ddx28Q9CWT6 Mir3535-201ENSMUST00000197651 147 ntBASIC2□□□□□ -2.09
Ddx28Q9CWT6 Mir1291-201ENSMUST00000199842 117 ntBASIC2□□□□□ -2.09
Ddx28Q9CWT6 Gm43993-201ENSMUST00000203972 247 ntBASIC2□□□□□ -2.09
Ddx28Q9CWT6 Gm45791-201ENSMUST00000212908 352 ntBASIC2□□□□□ -2.09
Ddx28Q9CWT6 AC170600.1-201ENSMUST00000228763 277 ntBASIC2□□□□□ -2.09
Ddx28Q9CWT6 Gm24460-201ENSMUST00000082731 106 ntBASIC2□□□□□ -2.09
Ddx28Q9CWT6 Gm23378-201ENSMUST00000082942 107 ntBASIC2□□□□□ -2.09
Ddx28Q9CWT6 Snora34-201ENSMUST00000083402 138 ntBASIC2□□□□□ -2.09
Ddx28Q9CWT6 Snora69-201ENSMUST00000083708 131 ntBASIC2□□□□□ -2.09
Ddx28Q9CWT6 Gm24698-201ENSMUST00000083883 130 ntBASIC2□□□□□ -2.09
Ddx28Q9CWT6 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.99□□□□□ -2.09
Ddx28Q9CWT6 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Ddx28Q9CWT6 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Ddx28Q9CWT6 Gm23013-201ENSMUST00000104146 106 ntBASIC1.99□□□□□ -2.09
Ddx28Q9CWT6 Gm25421-201ENSMUST00000104218 164 ntBASIC1.99□□□□□ -2.09
Ddx28Q9CWT6 Gm11862-201ENSMUST00000119678 659 ntBASIC1.99□□□□□ -2.09
Ddx28Q9CWT6 Gm24598-201ENSMUST00000122510 74 ntBASIC1.99□□□□□ -2.09
Ddx28Q9CWT6 Gm23214-201ENSMUST00000122716 157 ntBASIC1.99□□□□□ -2.09
Ddx28Q9CWT6 Gm24629-201ENSMUST00000122762 89 ntBASIC1.99□□□□□ -2.09
Ddx28Q9CWT6 Gm24858-201ENSMUST00000158058 323 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 123.3 ms