Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Mir466f-2-201ENSMUST00000104805 94 ntBASIC1.85□□□□□ -2.11
Smc1aQ9CU62 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.85□□□□□ -2.11
Smc1aQ9CU62 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Smc1aQ9CU62 Gm23858-201ENSMUST00000158384 106 ntBASIC1.85□□□□□ -2.11
Smc1aQ9CU62 Ighv2-8-201ENSMUST00000193935 262 ntBASIC1.85□□□□□ -2.11
Smc1aQ9CU62 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.85□□□□□ -2.11
Smc1aQ9CU62 Gm45704-201ENSMUST00000212582 403 ntBASIC1.85□□□□□ -2.11
Smc1aQ9CU62 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.85□□□□□ -2.11
Smc1aQ9CU62 Gm23100-201ENSMUST00000083455 141 ntBASIC1.85□□□□□ -2.11
Smc1aQ9CU62 Gm25651-201ENSMUST00000083782 119 ntBASIC1.85□□□□□ -2.11
Smc1aQ9CU62 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Smc1aQ9CU62 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.85□□□□□ -2.11
Smc1aQ9CU62 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Smc1aQ9CU62 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.84□□□□□ -2.11
Smc1aQ9CU62 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.84□□□□□ -2.11
Smc1aQ9CU62 Gm24282-201ENSMUST00000104232 66 ntBASIC1.84□□□□□ -2.11
Smc1aQ9CU62 Gm25279-201ENSMUST00000122608 133 ntBASIC1.84□□□□□ -2.11
Smc1aQ9CU62 Gm22791-201ENSMUST00000157232 145 ntBASIC1.84□□□□□ -2.11
Smc1aQ9CU62 Gm25730-201ENSMUST00000178753 165 ntBASIC1.84□□□□□ -2.11
Smc1aQ9CU62 Gm25121-201ENSMUST00000179846 79 ntBASIC1.84□□□□□ -2.11
Smc1aQ9CU62 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Smc1aQ9CU62 Mir7683-201ENSMUST00000183842 61 ntBASIC1.84□□□□□ -2.11
Smc1aQ9CU62 Gm27845-201ENSMUST00000184479 114 ntBASIC1.84□□□□□ -2.11
Smc1aQ9CU62 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Smc1aQ9CU62 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC1.84□□□□□ -2.11
Smc1aQ9CU62 Gm45119-201ENSMUST00000207612 199 ntBASIC1.84□□□□□ -2.11
Smc1aQ9CU62 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.84□□□□□ -2.11
Smc1aQ9CU62 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.84□□□□□ -2.11
Smc1aQ9CU62 Gm24043-201ENSMUST00000083108 116 ntBASIC1.84□□□□□ -2.11
Smc1aQ9CU62 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
Smc1aQ9CU62 Mir223-201ENSMUST00000102112 110 ntBASIC1.83□□□□□ -2.12
Smc1aQ9CU62 Gm22082-201ENSMUST00000157587 161 ntBASIC1.83□□□□□ -2.12
Smc1aQ9CU62 Gm24499-201ENSMUST00000158446 104 ntBASIC1.83□□□□□ -2.12
Smc1aQ9CU62 Gm22435-201ENSMUST00000158552 128 ntBASIC1.83□□□□□ -2.12
Smc1aQ9CU62 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Smc1aQ9CU62 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.83□□□□□ -2.12
Smc1aQ9CU62 Gm38109-201ENSMUST00000195386 181 ntBASIC1.83□□□□□ -2.12
Smc1aQ9CU62 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.83□□□□□ -2.12
Smc1aQ9CU62 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.83□□□□□ -2.12
Smc1aQ9CU62 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Smc1aQ9CU62 Gm42606-201ENSMUST00000114209 239 ntBASIC1.82□□□□□ -2.12
Smc1aQ9CU62 Gm14882-201ENSMUST00000117216 218 ntBASIC1.82□□□□□ -2.12
Smc1aQ9CU62 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.82□□□□□ -2.12
Smc1aQ9CU62 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.82□□□□□ -2.12
Smc1aQ9CU62 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Smc1aQ9CU62 Gm24262-201ENSMUST00000157431 144 ntBASIC1.82□□□□□ -2.12
Smc1aQ9CU62 Gm22075-201ENSMUST00000158599 192 ntBASIC1.82□□□□□ -2.12
Smc1aQ9CU62 Gm27248-201ENSMUST00000184004 166 ntBASIC1.82□□□□□ -2.12
Smc1aQ9CU62 Gm10105-201ENSMUST00000184601 270 ntBASIC1.82□□□□□ -2.12
Smc1aQ9CU62 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.82□□□□□ -2.12
Smc1aQ9CU62 Gm43624-201ENSMUST00000197368 180 ntBASIC1.82□□□□□ -2.12
Smc1aQ9CU62 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC1.82□□□□□ -2.12
Smc1aQ9CU62 Gm33654-201ENSMUST00000221704 215 ntBASIC1.82□□□□□ -2.12
Smc1aQ9CU62 Gm21937-201ENSMUST00000222825 218 ntBASIC1.82□□□□□ -2.12
Smc1aQ9CU62 Gm26314-201ENSMUST00000083891 107 ntBASIC1.82□□□□□ -2.12
Smc1aQ9CU62 Gm15526-201ENSMUST00000112504 204 ntBASIC1.81□□□□□ -2.12
Smc1aQ9CU62 Gm25909-201ENSMUST00000157619 121 ntBASIC1.81□□□□□ -2.12
Smc1aQ9CU62 Gm24853-201ENSMUST00000158026 121 ntBASIC1.81□□□□□ -2.12
Smc1aQ9CU62 Gm23967-201ENSMUST00000175062 78 ntBASIC1.81□□□□□ -2.12
Smc1aQ9CU62 Gm20257-202ENSMUST00000188643 130 ntBASIC1.81□□□□□ -2.12
Smc1aQ9CU62 Gm18546-201ENSMUST00000197245 676 ntBASIC1.81□□□□□ -2.12
Smc1aQ9CU62 Gm43472-201ENSMUST00000200175 154 ntBASIC1.81□□□□□ -2.12
Smc1aQ9CU62 Gm44655-201ENSMUST00000207768 423 ntBASIC1.81□□□□□ -2.12
Smc1aQ9CU62 Gm23242-201ENSMUST00000083055 107 ntBASIC1.81□□□□□ -2.12
Smc1aQ9CU62 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Smc1aQ9CU62 Gm6025-201ENSMUST00000121517 201 ntBASIC1.8□□□□□ -2.12
Smc1aQ9CU62 Gm24726-201ENSMUST00000158232 121 ntBASIC1.8□□□□□ -2.12
Smc1aQ9CU62 Gm24005-201ENSMUST00000158459 296 ntBASIC1.8□□□□□ -2.12
Smc1aQ9CU62 Gm20438-201ENSMUST00000174441 329 ntBASIC1.8□□□□□ -2.12
Smc1aQ9CU62 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Smc1aQ9CU62 Gm28794-201ENSMUST00000185276 136 ntBASIC1.8□□□□□ -2.12
Smc1aQ9CU62 Gm29005-201ENSMUST00000186773 320 ntBASIC1.8□□□□□ -2.12
Smc1aQ9CU62 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC1.8□□□□□ -2.12
Smc1aQ9CU62 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.8□□□□□ -2.12
Smc1aQ9CU62 Gm23721-201ENSMUST00000083005 107 ntBASIC1.8□□□□□ -2.12
Smc1aQ9CU62 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Smc1aQ9CU62 Gm13396-201ENSMUST00000120617 271 ntBASIC1.79□□□□□ -2.12
Smc1aQ9CU62 Gm6956-201ENSMUST00000134724 546 ntBASIC1.79□□□□□ -2.12
Smc1aQ9CU62 Gm25827-201ENSMUST00000157089 107 ntBASIC1.79□□□□□ -2.12
Smc1aQ9CU62 Gm24192-201ENSMUST00000157978 145 ntBASIC1.79□□□□□ -2.12
Smc1aQ9CU62 Gm24902-201ENSMUST00000158126 123 ntBASIC1.79□□□□□ -2.12
Smc1aQ9CU62 Gm23090-201ENSMUST00000177331 78 ntBASIC1.79□□□□□ -2.12
Smc1aQ9CU62 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC1.79□□□□□ -2.12
Smc1aQ9CU62 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC1.79□□□□□ -2.12
Smc1aQ9CU62 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC1.79□□□□□ -2.12
Smc1aQ9CU62 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC1.79□□□□□ -2.12
Smc1aQ9CU62 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC1.79□□□□□ -2.12
Smc1aQ9CU62 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC1.79□□□□□ -2.12
Smc1aQ9CU62 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC1.79□□□□□ -2.12
Smc1aQ9CU62 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC1.79□□□□□ -2.12
Smc1aQ9CU62 Mir6388-201ENSMUST00000184417 75 ntBASIC1.79□□□□□ -2.12
Smc1aQ9CU62 Gm36891-201ENSMUST00000191995 655 ntBASIC1.79□□□□□ -2.12
Smc1aQ9CU62 Gm34783-201ENSMUST00000209159 303 ntBASIC1.79□□□□□ -2.12
Smc1aQ9CU62 AC164117.2-201ENSMUST00000222090 327 ntBASIC1.79□□□□□ -2.12
Smc1aQ9CU62 Gm22365-201ENSMUST00000093750 117 ntBASIC1.79□□□□□ -2.12
Smc1aQ9CU62 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Smc1aQ9CU62 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
Smc1aQ9CU62 Gm26500-201ENSMUST00000101867 106 ntBASIC1.78□□□□□ -2.12
Smc1aQ9CU62 Gm25068-201ENSMUST00000103895 110 ntBASIC1.78□□□□□ -2.12
Smc1aQ9CU62 Gm23120-201ENSMUST00000157654 287 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms