Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.75□□□□□ -2.13
Ccdc43Q9CR29 Mir221-201ENSMUST00000083488 95 ntBASIC1.75□□□□□ -2.13
Ccdc43Q9CR29 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Ccdc43Q9CR29 Gm15526-201ENSMUST00000112504 204 ntBASIC1.74□□□□□ -2.13
Ccdc43Q9CR29 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.74□□□□□ -2.13
Ccdc43Q9CR29 Gm11254-201ENSMUST00000122368 653 ntBASIC1.74□□□□□ -2.13
Ccdc43Q9CR29 Gm25392-201ENSMUST00000157335 297 ntBASIC1.74□□□□□ -2.13
Ccdc43Q9CR29 Gm25491-201ENSMUST00000158733 308 ntBASIC1.74□□□□□ -2.13
Ccdc43Q9CR29 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.74□□□□□ -2.13
Ccdc43Q9CR29 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.74□□□□□ -2.13
Ccdc43Q9CR29 Gm27248-201ENSMUST00000184004 166 ntBASIC1.74□□□□□ -2.13
Ccdc43Q9CR29 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.74□□□□□ -2.13
Ccdc43Q9CR29 Gm28995-201ENSMUST00000186625 261 ntBASIC1.74□□□□□ -2.13
Ccdc43Q9CR29 Gm45654-201ENSMUST00000210980 123 ntBASIC1.74□□□□□ -2.13
Ccdc43Q9CR29 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Ccdc43Q9CR29 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Ccdc43Q9CR29 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.73□□□□□ -2.13
Ccdc43Q9CR29 Gm26396-201ENSMUST00000104093 132 ntBASIC1.73□□□□□ -2.13
Ccdc43Q9CR29 Gm9059-201ENSMUST00000118319 183 ntBASIC1.73□□□□□ -2.13
Ccdc43Q9CR29 Gm13588-201ENSMUST00000120026 135 ntBASIC1.73□□□□□ -2.13
Ccdc43Q9CR29 Gm22073-201ENSMUST00000122668 189 ntBASIC1.73□□□□□ -2.13
Ccdc43Q9CR29 Gm24632-201ENSMUST00000122770 323 ntBASIC1.73□□□□□ -2.13
Ccdc43Q9CR29 Gm22603-201ENSMUST00000157603 96 ntBASIC1.73□□□□□ -2.13
Ccdc43Q9CR29 Gm24348-201ENSMUST00000158710 130 ntBASIC1.73□□□□□ -2.13
Ccdc43Q9CR29 Gm24229-201ENSMUST00000158830 118 ntBASIC1.73□□□□□ -2.13
Ccdc43Q9CR29 Gm24174-201ENSMUST00000158933 111 ntBASIC1.73□□□□□ -2.13
Ccdc43Q9CR29 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC1.73□□□□□ -2.13
Ccdc43Q9CR29 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Ccdc43Q9CR29 Mir7050-201ENSMUST00000184636 60 ntBASIC1.73□□□□□ -2.13
Ccdc43Q9CR29 Gm29397-201ENSMUST00000185205 333 ntBASIC1.73□□□□□ -2.13
Ccdc43Q9CR29 Gm29167-201ENSMUST00000190024 377 ntBASIC1.73□□□□□ -2.13
Ccdc43Q9CR29 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.73□□□□□ -2.13
Ccdc43Q9CR29 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.73□□□□□ -2.13
Ccdc43Q9CR29 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.73□□□□□ -2.13
Ccdc43Q9CR29 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.73□□□□□ -2.13
Ccdc43Q9CR29 Mir148b-201ENSMUST00000083626 97 ntBASIC1.73□□□□□ -2.13
Ccdc43Q9CR29 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.73□□□□□ -2.13
Ccdc43Q9CR29 AC121844.2-201ENSMUST00000219067 2066 ntBASIC1.73□□□□□ -2.13
Ccdc43Q9CR29 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
Ccdc43Q9CR29 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.72□□□□□ -2.13
Ccdc43Q9CR29 Gm22761-201ENSMUST00000102278 96 ntBASIC1.72□□□□□ -2.13
Ccdc43Q9CR29 Mir653-201ENSMUST00000102402 85 ntBASIC1.72□□□□□ -2.13
Ccdc43Q9CR29 Gm23390-201ENSMUST00000157393 106 ntBASIC1.72□□□□□ -2.13
Ccdc43Q9CR29 Gm26401-201ENSMUST00000158502 76 ntBASIC1.72□□□□□ -2.13
Ccdc43Q9CR29 Mir1936-201ENSMUST00000158699 93 ntBASIC1.72□□□□□ -2.13
Ccdc43Q9CR29 Mir6346-201ENSMUST00000183982 81 ntBASIC1.72□□□□□ -2.13
Ccdc43Q9CR29 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Ccdc43Q9CR29 Gm43578-201ENSMUST00000201250 459 ntBASIC1.72□□□□□ -2.13
Ccdc43Q9CR29 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC1.72□□□□□ -2.13
Ccdc43Q9CR29 AC126554.1-201ENSMUST00000222161 271 ntBASIC1.72□□□□□ -2.13
Ccdc43Q9CR29 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.72□□□□□ -2.13
Ccdc43Q9CR29 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Ccdc43Q9CR29 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Ccdc43Q9CR29 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.72□□□□□ -2.13
Ccdc43Q9CR29 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Ccdc43Q9CR29 Gm23435-201ENSMUST00000157183 156 ntBASIC1.71□□□□□ -2.14
Ccdc43Q9CR29 Gm22435-201ENSMUST00000158552 128 ntBASIC1.71□□□□□ -2.14
Ccdc43Q9CR29 Gm33866-201ENSMUST00000196911 289 ntBASIC1.71□□□□□ -2.14
Ccdc43Q9CR29 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.71□□□□□ -2.14
Ccdc43Q9CR29 Gm23370-201ENSMUST00000199545 130 ntBASIC1.71□□□□□ -2.14
Ccdc43Q9CR29 Gm45119-201ENSMUST00000207612 199 ntBASIC1.71□□□□□ -2.14
Ccdc43Q9CR29 AC164161.1-201ENSMUST00000214076 639 ntBASIC1.71□□□□□ -2.14
Ccdc43Q9CR29 Gm8125-201ENSMUST00000216602 738 ntBASIC1.71□□□□□ -2.14
Ccdc43Q9CR29 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.71□□□□□ -2.14
Ccdc43Q9CR29 Gm23041-201ENSMUST00000083868 106 ntBASIC1.71□□□□□ -2.14
Ccdc43Q9CR29 Gm3867-201ENSMUST00000086108 279 ntBASIC1.71□□□□□ -2.14
Ccdc43Q9CR29 Gm25068-201ENSMUST00000103895 110 ntBASIC1.7□□□□□ -2.14
Ccdc43Q9CR29 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC1.7□□□□□ -2.14
Ccdc43Q9CR29 Gm15115-201ENSMUST00000121145 264 ntBASIC1.7□□□□□ -2.14
Ccdc43Q9CR29 Gm23718-201ENSMUST00000157350 307 ntBASIC1.7□□□□□ -2.14
Ccdc43Q9CR29 Gm22113-201ENSMUST00000158343 104 ntBASIC1.7□□□□□ -2.14
Ccdc43Q9CR29 Gm24308-201ENSMUST00000177773 114 ntBASIC1.7□□□□□ -2.14
Ccdc43Q9CR29 Gm23191-201ENSMUST00000179147 107 ntBASIC1.7□□□□□ -2.14
Ccdc43Q9CR29 Gm26200-201ENSMUST00000180273 79 ntBASIC1.7□□□□□ -2.14
Ccdc43Q9CR29 Gm27421-201ENSMUST00000184729 167 ntBASIC1.7□□□□□ -2.14
Ccdc43Q9CR29 Gm29603-201ENSMUST00000186792 334 ntBASIC1.7□□□□□ -2.14
Ccdc43Q9CR29 Gm29037-201ENSMUST00000189092 313 ntBASIC1.7□□□□□ -2.14
Ccdc43Q9CR29 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.7□□□□□ -2.14
Ccdc43Q9CR29 Gm45296-201ENSMUST00000209625 205 ntBASIC1.7□□□□□ -2.14
Ccdc43Q9CR29 Gm45704-201ENSMUST00000212582 403 ntBASIC1.7□□□□□ -2.14
Ccdc43Q9CR29 Gm33654-201ENSMUST00000221704 215 ntBASIC1.7□□□□□ -2.14
Ccdc43Q9CR29 Gm21937-201ENSMUST00000222825 218 ntBASIC1.7□□□□□ -2.14
Ccdc43Q9CR29 Gm23614-201ENSMUST00000082598 107 ntBASIC1.7□□□□□ -2.14
Ccdc43Q9CR29 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.7□□□□□ -2.14
Ccdc43Q9CR29 Gm42755-201ENSMUST00000198533 1493 ntBASIC1.69□□□□□ -2.14
Ccdc43Q9CR29 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Ccdc43Q9CR29 Gm15443-201ENSMUST00000118947 820 ntBASIC1.69□□□□□ -2.14
Ccdc43Q9CR29 Gm25423-201ENSMUST00000157609 107 ntBASIC1.69□□□□□ -2.14
Ccdc43Q9CR29 Gm24668-201ENSMUST00000158935 104 ntBASIC1.69□□□□□ -2.14
Ccdc43Q9CR29 Gm17052-201ENSMUST00000165496 289 ntBASIC1.69□□□□□ -2.14
Ccdc43Q9CR29 Gm26180-201ENSMUST00000179942 107 ntBASIC1.69□□□□□ -2.14
Ccdc43Q9CR29 Mir7026-201ENSMUST00000184384 67 ntBASIC1.69□□□□□ -2.14
Ccdc43Q9CR29 Gm18433-201ENSMUST00000192747 197 ntBASIC1.69□□□□□ -2.14
Ccdc43Q9CR29 Gm36953-201ENSMUST00000195295 268 ntBASIC1.69□□□□□ -2.14
Ccdc43Q9CR29 Gm44010-201ENSMUST00000204432 331 ntBASIC1.69□□□□□ -2.14
Ccdc43Q9CR29 Gm44962-201ENSMUST00000206460 279 ntBASIC1.69□□□□□ -2.14
Ccdc43Q9CR29 CT025526.1-201ENSMUST00000217327 267 ntBASIC1.69□□□□□ -2.14
Ccdc43Q9CR29 AC131720.2-201ENSMUST00000220420 431 ntBASIC1.69□□□□□ -2.14
Ccdc43Q9CR29 Gm46997-201ENSMUST00000222108 217 ntBASIC1.69□□□□□ -2.14
Ccdc43Q9CR29 AC162857.1-201ENSMUST00000226614 400 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 127.8 ms