Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 AC130821.1-201ENSMUST00000221997 293 ntBASIC1.03□□□□□ -2.24
RTRAFQ9CQE8 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.03□□□□□ -2.24
RTRAFQ9CQE8 Gm5899-201ENSMUST00000071770 270 ntBASIC1.03□□□□□ -2.24
RTRAFQ9CQE8 Gm26493-201ENSMUST00000083155 136 ntBASIC1.03□□□□□ -2.24
RTRAFQ9CQE8 Gm23245-201ENSMUST00000083370 135 ntBASIC1.03□□□□□ -2.24
RTRAFQ9CQE8 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
RTRAFQ9CQE8 Gm14296-202ENSMUST00000108931 750 ntBASIC1.02□□□□□ -2.25
RTRAFQ9CQE8 Gm14287-201ENSMUST00000121060 117 ntBASIC1.02□□□□□ -2.25
RTRAFQ9CQE8 Gm8121-201ENSMUST00000153583 499 ntBASIC1.02□□□□□ -2.25
RTRAFQ9CQE8 Gm23170-201ENSMUST00000157158 106 ntBASIC1.02□□□□□ -2.25
RTRAFQ9CQE8 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC1.02□□□□□ -2.25
RTRAFQ9CQE8 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.02□□□□□ -2.25
RTRAFQ9CQE8 Gm25958-201ENSMUST00000175114 71 ntBASIC1.02□□□□□ -2.25
RTRAFQ9CQE8 Gm26435-201ENSMUST00000179026 107 ntBASIC1.02□□□□□ -2.25
RTRAFQ9CQE8 Gm25121-201ENSMUST00000179846 79 ntBASIC1.02□□□□□ -2.25
RTRAFQ9CQE8 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC1.02□□□□□ -2.25
RTRAFQ9CQE8 Gm37693-201ENSMUST00000194562 234 ntBASIC1.02□□□□□ -2.25
RTRAFQ9CQE8 Gm44654-201ENSMUST00000208052 329 ntBASIC1.02□□□□□ -2.25
RTRAFQ9CQE8 AC116589.9-201ENSMUST00000221462 908 ntBASIC1.02□□□□□ -2.25
RTRAFQ9CQE8 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.02□□□□□ -2.25
RTRAFQ9CQE8 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.02□□□□□ -2.25
RTRAFQ9CQE8 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
RTRAFQ9CQE8 Gm26164-201ENSMUST00000083793 104 ntBASIC1.02□□□□□ -2.25
RTRAFQ9CQE8 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
RTRAFQ9CQE8 Mir701-201ENSMUST00000102208 109 ntBASIC1.01□□□□□ -2.25
RTRAFQ9CQE8 Mir374b-201ENSMUST00000102314 95 ntBASIC1.01□□□□□ -2.25
RTRAFQ9CQE8 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC1.01□□□□□ -2.25
RTRAFQ9CQE8 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC1.01□□□□□ -2.25
RTRAFQ9CQE8 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC1.01□□□□□ -2.25
RTRAFQ9CQE8 Gm23169-201ENSMUST00000157157 112 ntBASIC1.01□□□□□ -2.25
RTRAFQ9CQE8 Gm23435-201ENSMUST00000157183 156 ntBASIC1.01□□□□□ -2.25
RTRAFQ9CQE8 Gm24005-201ENSMUST00000158459 296 ntBASIC1.01□□□□□ -2.25
RTRAFQ9CQE8 Gm26213-201ENSMUST00000158582 110 ntBASIC1.01□□□□□ -2.25
RTRAFQ9CQE8 Mir1936-201ENSMUST00000158699 93 ntBASIC1.01□□□□□ -2.25
RTRAFQ9CQE8 Gm24668-201ENSMUST00000158935 104 ntBASIC1.01□□□□□ -2.25
RTRAFQ9CQE8 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC1.01□□□□□ -2.25
RTRAFQ9CQE8 Gm28995-201ENSMUST00000186625 261 ntBASIC1.01□□□□□ -2.25
RTRAFQ9CQE8 Gm28912-201ENSMUST00000189001 234 ntBASIC1.01□□□□□ -2.25
RTRAFQ9CQE8 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.01□□□□□ -2.25
RTRAFQ9CQE8 Gm46997-201ENSMUST00000222108 217 ntBASIC1.01□□□□□ -2.25
RTRAFQ9CQE8 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.01□□□□□ -2.25
RTRAFQ9CQE8 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
RTRAFQ9CQE8 Gm22980-201ENSMUST00000082608 70 ntBASIC1.01□□□□□ -2.25
RTRAFQ9CQE8 Gm26922-201ENSMUST00000082687 72 ntBASIC1.01□□□□□ -2.25
RTRAFQ9CQE8 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
RTRAFQ9CQE8 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.01□□□□□ -2.25
RTRAFQ9CQE8 Gm42755-201ENSMUST00000198533 1493 ntBASIC1□□□□□ -2.25
RTRAFQ9CQE8 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC1□□□□□ -2.25
RTRAFQ9CQE8 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC1□□□□□ -2.25
RTRAFQ9CQE8 Mir872-201ENSMUST00000104728 81 ntBASIC1□□□□□ -2.25
RTRAFQ9CQE8 Gm22073-201ENSMUST00000122668 189 ntBASIC1□□□□□ -2.25
RTRAFQ9CQE8 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1□□□□□ -2.25
RTRAFQ9CQE8 Gm22074-201ENSMUST00000158595 113 ntBASIC1□□□□□ -2.25
RTRAFQ9CQE8 Mir669n-201ENSMUST00000158636 54 ntBASIC1□□□□□ -2.25
RTRAFQ9CQE8 Gm26363-201ENSMUST00000158866 83 ntBASIC1□□□□□ -2.25
RTRAFQ9CQE8 Cfap61-214ENSMUST00000167179 183 ntBASIC1□□□□□ -2.25
RTRAFQ9CQE8 Gm27539-201ENSMUST00000184971 224 ntBASIC1□□□□□ -2.25
RTRAFQ9CQE8 Gm28414-201ENSMUST00000190111 294 ntBASIC1□□□□□ -2.25
RTRAFQ9CQE8 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1□□□□□ -2.25
RTRAFQ9CQE8 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1□□□□□ -2.25
RTRAFQ9CQE8 Gm5010-201ENSMUST00000213131 260 ntBASIC1□□□□□ -2.25
RTRAFQ9CQE8 AL935138.1-201ENSMUST00000215309 196 ntBASIC1□□□□□ -2.25
RTRAFQ9CQE8 Gm8125-201ENSMUST00000216602 738 ntBASIC1□□□□□ -2.25
RTRAFQ9CQE8 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1□□□□□ -2.25
RTRAFQ9CQE8 Snord68-201ENSMUST00000082516 86 ntBASIC1□□□□□ -2.25
RTRAFQ9CQE8 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1□□□□□ -2.25
RTRAFQ9CQE8 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1□□□□□ -2.25
RTRAFQ9CQE8 Gm43706-201ENSMUST00000198767 2652 ntBASIC1□□□□□ -2.25
RTRAFQ9CQE8 Gm22199-201ENSMUST00000122660 126 ntBASIC0.99□□□□□ -2.25
RTRAFQ9CQE8 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
RTRAFQ9CQE8 Gm24915-201ENSMUST00000157288 78 ntBASIC0.99□□□□□ -2.25
RTRAFQ9CQE8 Gm25423-201ENSMUST00000157609 107 ntBASIC0.99□□□□□ -2.25
RTRAFQ9CQE8 Gm23122-201ENSMUST00000157645 103 ntBASIC0.99□□□□□ -2.25
RTRAFQ9CQE8 Gm24308-201ENSMUST00000177773 114 ntBASIC0.99□□□□□ -2.25
RTRAFQ9CQE8 Gm26652-202ENSMUST00000181672 475 ntBASIC0.99□□□□□ -2.25
RTRAFQ9CQE8 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
RTRAFQ9CQE8 Gm20257-202ENSMUST00000188643 130 ntBASIC0.99□□□□□ -2.25
RTRAFQ9CQE8 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
RTRAFQ9CQE8 Mir378a-201ENSMUST00000198300 66 ntBASIC0.99□□□□□ -2.25
RTRAFQ9CQE8 AC126672.1-201ENSMUST00000217096 396 ntBASIC0.99□□□□□ -2.25
RTRAFQ9CQE8 Gm21937-201ENSMUST00000222825 218 ntBASIC0.99□□□□□ -2.25
RTRAFQ9CQE8 AC173482.4-201ENSMUST00000225096 348 ntBASIC0.99□□□□□ -2.25
RTRAFQ9CQE8 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC0.98□□□□□ -2.25
RTRAFQ9CQE8 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
RTRAFQ9CQE8 Gm24068-201ENSMUST00000104513 132 ntBASIC0.98□□□□□ -2.25
RTRAFQ9CQE8 Gm15443-201ENSMUST00000118947 820 ntBASIC0.98□□□□□ -2.25
RTRAFQ9CQE8 Gm11862-201ENSMUST00000119678 659 ntBASIC0.98□□□□□ -2.25
RTRAFQ9CQE8 Gm11522-201ENSMUST00000120533 176 ntBASIC0.98□□□□□ -2.25
RTRAFQ9CQE8 Gm12748-201ENSMUST00000120763 504 ntBASIC0.98□□□□□ -2.25
RTRAFQ9CQE8 Gm25434-201ENSMUST00000158278 167 ntBASIC0.98□□□□□ -2.25
RTRAFQ9CQE8 Gm25491-201ENSMUST00000158733 308 ntBASIC0.98□□□□□ -2.25
RTRAFQ9CQE8 Mir7091-201ENSMUST00000184075 79 ntBASIC0.98□□□□□ -2.25
RTRAFQ9CQE8 Gm27959-201ENSMUST00000185172 111 ntBASIC0.98□□□□□ -2.25
RTRAFQ9CQE8 Gm38041-201ENSMUST00000194445 661 ntBASIC0.98□□□□□ -2.25
RTRAFQ9CQE8 Gm45456-201ENSMUST00000210841 243 ntBASIC0.98□□□□□ -2.25
RTRAFQ9CQE8 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC0.98□□□□□ -2.25
RTRAFQ9CQE8 AC168056.1-201ENSMUST00000225270 180 ntBASIC0.98□□□□□ -2.25
RTRAFQ9CQE8 Gm11351-202ENSMUST00000225724 478 ntBASIC0.98□□□□□ -2.25
RTRAFQ9CQE8 Gm23627-201ENSMUST00000082459 107 ntBASIC0.98□□□□□ -2.25
RTRAFQ9CQE8 Gm22502-201ENSMUST00000082488 107 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms