Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.11□□□□□ -2.23
Use1Q9CQ56 Gm37693-201ENSMUST00000194562 234 ntBASIC1.11□□□□□ -2.23
Use1Q9CQ56 Gm43199-201ENSMUST00000200019 307 ntBASIC1.11□□□□□ -2.23
Use1Q9CQ56 Gm37642-201ENSMUST00000193166 1735 ntBASIC1.11□□□□□ -2.23
Use1Q9CQ56 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Use1Q9CQ56 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Use1Q9CQ56 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC1.1□□□□□ -2.23
Use1Q9CQ56 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC1.1□□□□□ -2.23
Use1Q9CQ56 Gm23535-201ENSMUST00000157542 106 ntBASIC1.1□□□□□ -2.23
Use1Q9CQ56 Gm23411-201ENSMUST00000157988 62 ntBASIC1.1□□□□□ -2.23
Use1Q9CQ56 Gm24901-201ENSMUST00000158125 110 ntBASIC1.1□□□□□ -2.23
Use1Q9CQ56 Gm26363-201ENSMUST00000158866 83 ntBASIC1.1□□□□□ -2.23
Use1Q9CQ56 Gm24510-201ENSMUST00000174965 94 ntBASIC1.1□□□□□ -2.23
Use1Q9CQ56 Gm22166-201ENSMUST00000178419 121 ntBASIC1.1□□□□□ -2.23
Use1Q9CQ56 Gm23288-201ENSMUST00000179213 121 ntBASIC1.1□□□□□ -2.23
Use1Q9CQ56 Gm28848-201ENSMUST00000189984 168 ntBASIC1.1□□□□□ -2.23
Use1Q9CQ56 Gm26265-202ENSMUST00000196326 133 ntBASIC1.1□□□□□ -2.23
Use1Q9CQ56 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
Use1Q9CQ56 Gm5010-201ENSMUST00000213131 260 ntBASIC1.1□□□□□ -2.23
Use1Q9CQ56 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC1.1□□□□□ -2.23
Use1Q9CQ56 Gm24494-201ENSMUST00000083804 81 ntBASIC1.1□□□□□ -2.23
Use1Q9CQ56 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
Use1Q9CQ56 Gm12449-201ENSMUST00000117572 234 ntBASIC1.09□□□□□ -2.23
Use1Q9CQ56 Gm9059-201ENSMUST00000118319 183 ntBASIC1.09□□□□□ -2.23
Use1Q9CQ56 Mir1904-201ENSMUST00000122702 80 ntBASIC1.09□□□□□ -2.23
Use1Q9CQ56 Gm26213-201ENSMUST00000158582 110 ntBASIC1.09□□□□□ -2.23
Use1Q9CQ56 Mir7225-201ENSMUST00000184178 54 ntBASIC1.09□□□□□ -2.23
Use1Q9CQ56 Gm18296-201ENSMUST00000192475 783 ntBASIC1.09□□□□□ -2.23
Use1Q9CQ56 Gm45878-201ENSMUST00000211839 241 ntBASIC1.09□□□□□ -2.23
Use1Q9CQ56 AL772265.1-201ENSMUST00000214379 305 ntBASIC1.09□□□□□ -2.23
Use1Q9CQ56 AC164297.3-201ENSMUST00000224238 94 ntBASIC1.09□□□□□ -2.23
Use1Q9CQ56 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.09□□□□□ -2.23
Use1Q9CQ56 Snord1a-201ENSMUST00000083160 74 ntBASIC1.09□□□□□ -2.23
Use1Q9CQ56 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
Use1Q9CQ56 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.08□□□□□ -2.24
Use1Q9CQ56 Gm11862-201ENSMUST00000119678 659 ntBASIC1.08□□□□□ -2.24
Use1Q9CQ56 Gm13396-201ENSMUST00000120617 271 ntBASIC1.08□□□□□ -2.24
Use1Q9CQ56 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC1.08□□□□□ -2.24
Use1Q9CQ56 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC1.08□□□□□ -2.24
Use1Q9CQ56 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC1.08□□□□□ -2.24
Use1Q9CQ56 Gm22556-201ENSMUST00000157803 100 ntBASIC1.08□□□□□ -2.24
Use1Q9CQ56 Gm24638-201ENSMUST00000179807 132 ntBASIC1.08□□□□□ -2.24
Use1Q9CQ56 Gm37089-201ENSMUST00000195616 129 ntBASIC1.08□□□□□ -2.24
Use1Q9CQ56 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC1.08□□□□□ -2.24
Use1Q9CQ56 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.08□□□□□ -2.24
Use1Q9CQ56 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Use1Q9CQ56 Gm26314-201ENSMUST00000083891 107 ntBASIC1.08□□□□□ -2.24
Use1Q9CQ56 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
Use1Q9CQ56 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.08□□□□□ -2.24
Use1Q9CQ56 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Use1Q9CQ56 Gm22785-201ENSMUST00000104087 132 ntBASIC1.07□□□□□ -2.24
Use1Q9CQ56 Gm26424-201ENSMUST00000122530 104 ntBASIC1.07□□□□□ -2.24
Use1Q9CQ56 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC1.07□□□□□ -2.24
Use1Q9CQ56 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.07□□□□□ -2.24
Use1Q9CQ56 Gm24777-201ENSMUST00000157644 107 ntBASIC1.07□□□□□ -2.24
Use1Q9CQ56 Gm44408-201ENSMUST00000200205 66 ntBASIC1.07□□□□□ -2.24
Use1Q9CQ56 Gm43993-201ENSMUST00000203972 247 ntBASIC1.07□□□□□ -2.24
Use1Q9CQ56 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC1.07□□□□□ -2.24
Use1Q9CQ56 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Use1Q9CQ56 Gm22834-201ENSMUST00000102021 79 ntBASIC1.06□□□□□ -2.24
Use1Q9CQ56 Gm25832-201ENSMUST00000104140 130 ntBASIC1.06□□□□□ -2.24
Use1Q9CQ56 Mir293-201ENSMUST00000104841 80 ntBASIC1.06□□□□□ -2.24
Use1Q9CQ56 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC1.06□□□□□ -2.24
Use1Q9CQ56 Gm24409-201ENSMUST00000157881 152 ntBASIC1.06□□□□□ -2.24
Use1Q9CQ56 Gm23277-201ENSMUST00000157914 136 ntBASIC1.06□□□□□ -2.24
Use1Q9CQ56 Gm25163-201ENSMUST00000158905 104 ntBASIC1.06□□□□□ -2.24
Use1Q9CQ56 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC1.06□□□□□ -2.24
Use1Q9CQ56 Gm25069-201ENSMUST00000175238 86 ntBASIC1.06□□□□□ -2.24
Use1Q9CQ56 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC1.06□□□□□ -2.24
Use1Q9CQ56 AC126267.1-201ENSMUST00000214282 284 ntBASIC1.06□□□□□ -2.24
Use1Q9CQ56 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC1.06□□□□□ -2.24
Use1Q9CQ56 Mir701-201ENSMUST00000102208 109 ntBASIC1.05□□□□□ -2.24
Use1Q9CQ56 Gm23336-201ENSMUST00000117023 123 ntBASIC1.05□□□□□ -2.24
Use1Q9CQ56 Gm13475-201ENSMUST00000119290 234 ntBASIC1.05□□□□□ -2.24
Use1Q9CQ56 Gm11358-201ENSMUST00000122310 373 ntBASIC1.05□□□□□ -2.24
Use1Q9CQ56 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.05□□□□□ -2.24
Use1Q9CQ56 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
Use1Q9CQ56 Gm23670-201ENSMUST00000157469 119 ntBASIC1.05□□□□□ -2.24
Use1Q9CQ56 Mir1936-201ENSMUST00000158699 93 ntBASIC1.05□□□□□ -2.24
Use1Q9CQ56 Gm17052-201ENSMUST00000165496 289 ntBASIC1.05□□□□□ -2.24
Use1Q9CQ56 Mir7063-201ENSMUST00000184158 91 ntBASIC1.05□□□□□ -2.24
Use1Q9CQ56 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC1.05□□□□□ -2.24
Use1Q9CQ56 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.05□□□□□ -2.24
Use1Q9CQ56 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.05□□□□□ -2.24
Use1Q9CQ56 AC192616.1-201ENSMUST00000221922 132 ntBASIC1.05□□□□□ -2.24
Use1Q9CQ56 Gm46997-201ENSMUST00000222108 217 ntBASIC1.05□□□□□ -2.24
Use1Q9CQ56 AC132918.1-201ENSMUST00000227877 925 ntBASIC1.05□□□□□ -2.24
Use1Q9CQ56 Gm26074-201ENSMUST00000104063 129 ntBASIC1.04□□□□□ -2.24
Use1Q9CQ56 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC1.04□□□□□ -2.24
Use1Q9CQ56 Gm23419-201ENSMUST00000175523 84 ntBASIC1.04□□□□□ -2.24
Use1Q9CQ56 AC162387.1-201ENSMUST00000213369 213 ntBASIC1.04□□□□□ -2.24
Use1Q9CQ56 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.04□□□□□ -2.24
Use1Q9CQ56 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
Use1Q9CQ56 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
Use1Q9CQ56 Gm24588-201ENSMUST00000116696 83 ntBASIC1.03□□□□□ -2.24
Use1Q9CQ56 Gm14923-201ENSMUST00000118270 155 ntBASIC1.03□□□□□ -2.24
Use1Q9CQ56 Gm15443-201ENSMUST00000118947 820 ntBASIC1.03□□□□□ -2.24
Use1Q9CQ56 Gm11512-201ENSMUST00000119669 663 ntBASIC1.03□□□□□ -2.24
Use1Q9CQ56 Gm23212-201ENSMUST00000122718 60 ntBASIC1.03□□□□□ -2.24
Use1Q9CQ56 Gm23083-201ENSMUST00000157851 116 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms