Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm18747-201ENSMUST00000198129 648 ntBASIC-1.02□□□□□ -2.57
Cdh23Q99PF4 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC-1.03□□□□□ -2.57
Cdh23Q99PF4 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC-1.03□□□□□ -2.57
Cdh23Q99PF4 Gm23053-201ENSMUST00000175136 96 ntBASIC-1.03□□□□□ -2.57
Cdh23Q99PF4 Npn2-202ENSMUST00000189275 235 ntBASIC-1.03□□□□□ -2.57
Cdh23Q99PF4 Gm25006-201ENSMUST00000083813 107 ntBASIC-1.03□□□□□ -2.57
Cdh23Q99PF4 Gm24172-201ENSMUST00000104127 117 ntBASIC-1.03□□□□□ -2.57
Cdh23Q99PF4 Gm24419-201ENSMUST00000157875 332 ntBASIC-1.03□□□□□ -2.57
Cdh23Q99PF4 Gm24191-201ENSMUST00000157977 122 ntBASIC-1.03□□□□□ -2.57
Cdh23Q99PF4 Mir6335-201ENSMUST00000184081 98 ntBASIC-1.03□□□□□ -2.57
Cdh23Q99PF4 Mir7229-201ENSMUST00000197062 53 ntBASIC-1.03□□□□□ -2.57
Cdh23Q99PF4 Gm45878-201ENSMUST00000211839 241 ntBASIC-1.03□□□□□ -2.57
Cdh23Q99PF4 AC154282.1-201ENSMUST00000223154 265 ntBASIC-1.03□□□□□ -2.57
Cdh23Q99PF4 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC-1.04□□□□□ -2.58
Cdh23Q99PF4 Gm16588-201ENSMUST00000162889 355 ntBASIC-1.04□□□□□ -2.58
Cdh23Q99PF4 Gm24108-201ENSMUST00000175495 77 ntBASIC-1.04□□□□□ -2.58
Cdh23Q99PF4 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC-1.04□□□□□ -2.58
Cdh23Q99PF4 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC-1.04□□□□□ -2.58
Cdh23Q99PF4 Gm45197-201ENSMUST00000205288 151 ntBASIC-1.04□□□□□ -2.58
Cdh23Q99PF4 Gm26226-201ENSMUST00000082509 116 ntBASIC-1.04□□□□□ -2.58
Cdh23Q99PF4 Gm10177-202ENSMUST00000161698 207 ntBASIC-1.04□□□□□ -2.58
Cdh23Q99PF4 Gm26430-201ENSMUST00000178054 107 ntBASIC-1.04□□□□□ -2.58
Cdh23Q99PF4 Gm27236-201ENSMUST00000184147 442 ntBASIC-1.04□□□□□ -2.58
Cdh23Q99PF4 Gm29640-201ENSMUST00000187972 278 ntBASIC-1.04□□□□□ -2.58
Cdh23Q99PF4 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC-1.04□□□□□ -2.58
Cdh23Q99PF4 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC-1.04□□□□□ -2.58
Cdh23Q99PF4 Gm22236-201ENSMUST00000157093 106 ntBASIC-1.04□□□□□ -2.58
Cdh23Q99PF4 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-1.04□□□□□ -2.58
Cdh23Q99PF4 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC-1.04□□□□□ -2.58
Cdh23Q99PF4 Gm28241-201ENSMUST00000190916 235 ntBASIC-1.04□□□□□ -2.58
Cdh23Q99PF4 Gm20102-201ENSMUST00000222445 220 ntBASIC-1.04□□□□□ -2.58
Cdh23Q99PF4 Mir3066-201ENSMUST00000175296 83 ntBASIC-1.05□□□□□ -2.58
Cdh23Q99PF4 Trbv25-201ENSMUST00000194700 273 ntBASIC-1.05□□□□□ -2.58
Cdh23Q99PF4 AC117656.1-201ENSMUST00000225826 339 ntBASIC-1.05□□□□□ -2.58
Cdh23Q99PF4 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC-1.05□□□□□ -2.58
Cdh23Q99PF4 Gm23853-201ENSMUST00000158375 104 ntBASIC-1.05□□□□□ -2.58
Cdh23Q99PF4 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC-1.05□□□□□ -2.58
Cdh23Q99PF4 Gm22827-201ENSMUST00000083766 107 ntBASIC-1.05□□□□□ -2.58
Cdh23Q99PF4 Mir18b-201ENSMUST00000103923 83 ntBASIC-1.05□□□□□ -2.58
Cdh23Q99PF4 Gm14846-201ENSMUST00000121868 216 ntBASIC-1.05□□□□□ -2.58
Cdh23Q99PF4 Gm26290-201ENSMUST00000158891 145 ntBASIC-1.05□□□□□ -2.58
Cdh23Q99PF4 Gm25408-201ENSMUST00000104104 133 ntBASIC-1.06□□□□□ -2.58
Cdh23Q99PF4 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC-1.06□□□□□ -2.58
Cdh23Q99PF4 Gm11358-201ENSMUST00000122310 373 ntBASIC-1.06□□□□□ -2.58
Cdh23Q99PF4 Gm28995-201ENSMUST00000186625 261 ntBASIC-1.06□□□□□ -2.58
Cdh23Q99PF4 Gm22169-201ENSMUST00000083229 107 ntBASIC-1.06□□□□□ -2.58
Cdh23Q99PF4 Mir654-201ENSMUST00000104787 84 ntBASIC-1.06□□□□□ -2.58
Cdh23Q99PF4 Gm22319-201ENSMUST00000157147 122 ntBASIC-1.06□□□□□ -2.58
Cdh23Q99PF4 Gm29184-201ENSMUST00000190038 334 ntBASIC-1.06□□□□□ -2.58
Cdh23Q99PF4 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC-1.06□□□□□ -2.58
Cdh23Q99PF4 Gm22981-201ENSMUST00000082611 75 ntBASIC-1.06□□□□□ -2.58
Cdh23Q99PF4 Mir466i-201ENSMUST00000116924 121 ntBASIC-1.07□□□□□ -2.58
Cdh23Q99PF4 Gm12102-201ENSMUST00000118251 604 ntBASIC-1.07□□□□□ -2.58
Cdh23Q99PF4 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC-1.07□□□□□ -2.58
Cdh23Q99PF4 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC-1.07□□□□□ -2.58
Cdh23Q99PF4 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC-1.07□□□□□ -2.58
Cdh23Q99PF4 Gm14945-201ENSMUST00000119556 1118 ntBASIC-1.07□□□□□ -2.58
Cdh23Q99PF4 Gm8988-201ENSMUST00000155015 1240 ntBASIC-1.07□□□□□ -2.58
Cdh23Q99PF4 Gm42647-201ENSMUST00000195939 459 ntBASIC-1.07□□□□□ -2.58
Cdh23Q99PF4 Trdv3-201ENSMUST00000198551 309 ntBASIC-1.07□□□□□ -2.58
Cdh23Q99PF4 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC-1.07□□□□□ -2.58
Cdh23Q99PF4 AC139294.2-201ENSMUST00000227159 285 ntBASIC-1.07□□□□□ -2.58
Cdh23Q99PF4 AC154515.1-201ENSMUST00000226085 2841 ntBASIC-1.07□□□□□ -2.58
Cdh23Q99PF4 Gm24283-201ENSMUST00000104233 107 ntBASIC-1.07□□□□□ -2.58
Cdh23Q99PF4 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC-1.07□□□□□ -2.58
Cdh23Q99PF4 Gm26143-201ENSMUST00000104480 108 ntBASIC-1.08□□□□□ -2.58
Cdh23Q99PF4 Gm21978-201ENSMUST00000179696 377 ntBASIC-1.08□□□□□ -2.58
Cdh23Q99PF4 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC-1.08□□□□□ -2.58
Cdh23Q99PF4 Gm18696-201ENSMUST00000220103 274 ntBASIC-1.08□□□□□ -2.58
Cdh23Q99PF4 Gm23159-201ENSMUST00000175088 77 ntBASIC-1.08□□□□□ -2.58
Cdh23Q99PF4 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC-1.08□□□□□ -2.58
Cdh23Q99PF4 Gm22586-201ENSMUST00000157507 122 ntBASIC-1.08□□□□□ -2.58
Cdh23Q99PF4 n-R5s155-201ENSMUST00000122531 113 ntBASIC-1.09□□□□□ -2.58
Cdh23Q99PF4 n-R5s39-201ENSMUST00000122613 108 ntBASIC-1.09□□□□□ -2.58
Cdh23Q99PF4 Gm25472-201ENSMUST00000175454 78 ntBASIC-1.09□□□□□ -2.58
Cdh23Q99PF4 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC-1.09□□□□□ -2.58
Cdh23Q99PF4 Gm5955-201ENSMUST00000222712 219 ntBASIC-1.09□□□□□ -2.58
Cdh23Q99PF4 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC-1.09□□□□□ -2.58
Cdh23Q99PF4 Gm45429-201ENSMUST00000209527 172 ntBASIC-1.09□□□□□ -2.58
Cdh23Q99PF4 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-1.1□□□□□ -2.58
Cdh23Q99PF4 AC123062.1-201ENSMUST00000221287 481 ntBASIC-1.1□□□□□ -2.58
Cdh23Q99PF4 AC163295.1-201ENSMUST00000227840 314 ntBASIC-1.1□□□□□ -2.58
Cdh23Q99PF4 Gm26131-201ENSMUST00000082725 110 ntBASIC-1.1□□□□□ -2.58
Cdh23Q99PF4 Mir350-201ENSMUST00000083639 99 ntBASIC-1.1□□□□□ -2.58
Cdh23Q99PF4 Mir669i-201ENSMUST00000117007 127 ntBASIC-1.1□□□□□ -2.59
Cdh23Q99PF4 AC153662.1-201ENSMUST00000222220 270 ntBASIC-1.1□□□□□ -2.59
Cdh23Q99PF4 AC173481.1-201ENSMUST00000223351 270 ntBASIC-1.1□□□□□ -2.59
Cdh23Q99PF4 AC126691.1-201ENSMUST00000226534 202 ntBASIC-1.1□□□□□ -2.59
Cdh23Q99PF4 Gm24276-201ENSMUST00000102181 110 ntBASIC-1.1□□□□□ -2.59
Cdh23Q99PF4 Gm13541-201ENSMUST00000119519 283 ntBASIC-1.1□□□□□ -2.59
Cdh23Q99PF4 Gm12045-201ENSMUST00000122122 573 ntBASIC-1.1□□□□□ -2.59
Cdh23Q99PF4 Gm14129-201ENSMUST00000122436 291 ntBASIC-1.1□□□□□ -2.59
Cdh23Q99PF4 Gm24524-201ENSMUST00000082925 170 ntBASIC-1.1□□□□□ -2.59
Cdh23Q99PF4 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC-1.11□□□□□ -2.59
Cdh23Q99PF4 AC114916.1-201ENSMUST00000228465 494 ntBASIC-1.11□□□□□ -2.59
Cdh23Q99PF4 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC-1.11□□□□□ -2.59
Cdh23Q99PF4 AC116465.1-201ENSMUST00000220324 235 ntBASIC-1.11□□□□□ -2.59
Cdh23Q99PF4 Mir200a-201ENSMUST00000083466 90 ntBASIC-1.11□□□□□ -2.59
Cdh23Q99PF4 Gm15861-201ENSMUST00000120979 339 ntBASIC-1.12□□□□□ -2.59
Cdh23Q99PF4 Gm11575-201ENSMUST00000122243 228 ntBASIC-1.12□□□□□ -2.59
Retrieved 100 of 76,532 protein–RNA pairs in 97.2 ms