Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Gm20102-201ENSMUST00000222445 220 ntBASIC1.58□□□□□ -2.16
Sf3b1Q99NB9 Gm23100-201ENSMUST00000083455 141 ntBASIC1.58□□□□□ -2.16
Sf3b1Q99NB9 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC1.58□□□□□ -2.16
Sf3b1Q99NB9 Mir223-201ENSMUST00000102112 110 ntBASIC1.57□□□□□ -2.16
Sf3b1Q99NB9 Gm12417-201ENSMUST00000119153 403 ntBASIC1.57□□□□□ -2.16
Sf3b1Q99NB9 Gm14972-201ENSMUST00000121780 364 ntBASIC1.57□□□□□ -2.16
Sf3b1Q99NB9 Gm24851-201ENSMUST00000158028 103 ntBASIC1.57□□□□□ -2.16
Sf3b1Q99NB9 Gm19901-201ENSMUST00000192191 495 ntBASIC1.57□□□□□ -2.16
Sf3b1Q99NB9 Gm44308-201ENSMUST00000197080 99 ntBASIC1.57□□□□□ -2.16
Sf3b1Q99NB9 Snord68-201ENSMUST00000082516 86 ntBASIC1.57□□□□□ -2.16
Sf3b1Q99NB9 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.56□□□□□ -2.16
Sf3b1Q99NB9 Gm11835-201ENSMUST00000120635 663 ntBASIC1.56□□□□□ -2.16
Sf3b1Q99NB9 Gm23122-201ENSMUST00000157645 103 ntBASIC1.56□□□□□ -2.16
Sf3b1Q99NB9 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.56□□□□□ -2.16
Sf3b1Q99NB9 Ighv2-8-201ENSMUST00000193935 262 ntBASIC1.56□□□□□ -2.16
Sf3b1Q99NB9 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
Sf3b1Q99NB9 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
Sf3b1Q99NB9 AC166358.10-201ENSMUST00000220556 144 ntBASIC1.56□□□□□ -2.16
Sf3b1Q99NB9 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.56□□□□□ -2.16
Sf3b1Q99NB9 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.56□□□□□ -2.16
Sf3b1Q99NB9 Gm25801-201ENSMUST00000082638 106 ntBASIC1.56□□□□□ -2.16
Sf3b1Q99NB9 Mir340-201ENSMUST00000083483 98 ntBASIC1.56□□□□□ -2.16
Sf3b1Q99NB9 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC1.56□□□□□ -2.16
Sf3b1Q99NB9 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Sf3b1Q99NB9 Gm23015-201ENSMUST00000104145 128 ntBASIC1.55□□□□□ -2.16
Sf3b1Q99NB9 Gm15861-201ENSMUST00000120979 339 ntBASIC1.55□□□□□ -2.16
Sf3b1Q99NB9 Gm25486-201ENSMUST00000158726 63 ntBASIC1.55□□□□□ -2.16
Sf3b1Q99NB9 Gm24222-201ENSMUST00000158834 93 ntBASIC1.55□□□□□ -2.16
Sf3b1Q99NB9 Gm3027-201ENSMUST00000167579 451 ntBASIC1.55□□□□□ -2.16
Sf3b1Q99NB9 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.55□□□□□ -2.16
Sf3b1Q99NB9 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.55□□□□□ -2.16
Sf3b1Q99NB9 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
Sf3b1Q99NB9 Gm24037-201ENSMUST00000082871 180 ntBASIC1.55□□□□□ -2.16
Sf3b1Q99NB9 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Sf3b1Q99NB9 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.54□□□□□ -2.16
Sf3b1Q99NB9 Gm11854-201ENSMUST00000117839 446 ntBASIC1.54□□□□□ -2.16
Sf3b1Q99NB9 Gm6829-201ENSMUST00000119858 360 ntBASIC1.54□□□□□ -2.16
Sf3b1Q99NB9 Gm26049-201ENSMUST00000157313 108 ntBASIC1.54□□□□□ -2.16
Sf3b1Q99NB9 Gm17100-201ENSMUST00000168963 272 ntBASIC1.54□□□□□ -2.16
Sf3b1Q99NB9 Gm21754-201ENSMUST00000177550 479 ntBASIC1.54□□□□□ -2.16
Sf3b1Q99NB9 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Sf3b1Q99NB9 Gm9156-201ENSMUST00000189660 463 ntBASIC1.54□□□□□ -2.16
Sf3b1Q99NB9 Gm46993-201ENSMUST00000220708 259 ntBASIC1.54□□□□□ -2.16
Sf3b1Q99NB9 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.54□□□□□ -2.16
Sf3b1Q99NB9 AC163646.2-201ENSMUST00000227962 141 ntBASIC1.54□□□□□ -2.16
Sf3b1Q99NB9 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.54□□□□□ -2.16
Sf3b1Q99NB9 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.54□□□□□ -2.16
Sf3b1Q99NB9 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
Sf3b1Q99NB9 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.53□□□□□ -2.16
Sf3b1Q99NB9 Gm23336-201ENSMUST00000117023 123 ntBASIC1.53□□□□□ -2.16
Sf3b1Q99NB9 Gm11512-201ENSMUST00000119669 663 ntBASIC1.53□□□□□ -2.16
Sf3b1Q99NB9 Gm24895-201ENSMUST00000122742 74 ntBASIC1.53□□□□□ -2.16
Sf3b1Q99NB9 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.53□□□□□ -2.16
Sf3b1Q99NB9 Gm26150-201ENSMUST00000157426 151 ntBASIC1.53□□□□□ -2.16
Sf3b1Q99NB9 Gm25253-201ENSMUST00000179958 107 ntBASIC1.53□□□□□ -2.16
Sf3b1Q99NB9 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
Sf3b1Q99NB9 Gm45907-201ENSMUST00000213023 193 ntBASIC1.53□□□□□ -2.16
Sf3b1Q99NB9 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.53□□□□□ -2.16
Sf3b1Q99NB9 Snord118-201ENSMUST00000082965 135 ntBASIC1.53□□□□□ -2.16
Sf3b1Q99NB9 Gm24615-201ENSMUST00000083268 113 ntBASIC1.53□□□□□ -2.16
Sf3b1Q99NB9 Gm23731-201ENSMUST00000083749 107 ntBASIC1.53□□□□□ -2.16
Sf3b1Q99NB9 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
Sf3b1Q99NB9 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
Sf3b1Q99NB9 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
Sf3b1Q99NB9 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Sf3b1Q99NB9 Gm13729-201ENSMUST00000120328 406 ntBASIC1.52□□□□□ -2.17
Sf3b1Q99NB9 Gm6025-201ENSMUST00000121517 201 ntBASIC1.52□□□□□ -2.17
Sf3b1Q99NB9 Gm22082-201ENSMUST00000157587 161 ntBASIC1.52□□□□□ -2.17
Sf3b1Q99NB9 Gm23854-201ENSMUST00000158378 108 ntBASIC1.52□□□□□ -2.17
Sf3b1Q99NB9 Gm24390-201ENSMUST00000179578 62 ntBASIC1.52□□□□□ -2.17
Sf3b1Q99NB9 Gm27493-201ENSMUST00000184128 78 ntBASIC1.52□□□□□ -2.17
Sf3b1Q99NB9 Mir7241-201ENSMUST00000184532 64 ntBASIC1.52□□□□□ -2.17
Sf3b1Q99NB9 Mir7665-201ENSMUST00000184907 63 ntBASIC1.52□□□□□ -2.17
Sf3b1Q99NB9 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Sf3b1Q99NB9 AC162857.1-201ENSMUST00000226614 400 ntBASIC1.52□□□□□ -2.17
Sf3b1Q99NB9 Gm25579-201ENSMUST00000083407 106 ntBASIC1.52□□□□□ -2.17
Sf3b1Q99NB9 Gm25068-201ENSMUST00000103895 110 ntBASIC1.51□□□□□ -2.17
Sf3b1Q99NB9 Gm22963-201ENSMUST00000157960 91 ntBASIC1.51□□□□□ -2.17
Sf3b1Q99NB9 Gm23221-201ENSMUST00000158118 93 ntBASIC1.51□□□□□ -2.17
Sf3b1Q99NB9 Gm25371-201ENSMUST00000158162 101 ntBASIC1.51□□□□□ -2.17
Sf3b1Q99NB9 Rnu7-201ENSMUST00000158458 62 ntBASIC1.51□□□□□ -2.17
Sf3b1Q99NB9 Gm26405-201ENSMUST00000158495 100 ntBASIC1.51□□□□□ -2.17
Sf3b1Q99NB9 Gm33866-201ENSMUST00000196911 289 ntBASIC1.51□□□□□ -2.17
Sf3b1Q99NB9 Gm43035-201ENSMUST00000197626 517 ntBASIC1.51□□□□□ -2.17
Sf3b1Q99NB9 Gm43911-201ENSMUST00000203097 76 ntBASIC1.51□□□□□ -2.17
Sf3b1Q99NB9 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC1.51□□□□□ -2.17
Sf3b1Q99NB9 Gm44962-201ENSMUST00000206460 279 ntBASIC1.51□□□□□ -2.17
Sf3b1Q99NB9 Gm45119-201ENSMUST00000207612 199 ntBASIC1.51□□□□□ -2.17
Sf3b1Q99NB9 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
Sf3b1Q99NB9 Gm8125-201ENSMUST00000216602 738 ntBASIC1.51□□□□□ -2.17
Sf3b1Q99NB9 AC126554.1-201ENSMUST00000222161 271 ntBASIC1.51□□□□□ -2.17
Sf3b1Q99NB9 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Sf3b1Q99NB9 Gm24536-201ENSMUST00000083144 107 ntBASIC1.51□□□□□ -2.17
Sf3b1Q99NB9 Gm3867-201ENSMUST00000086108 279 ntBASIC1.51□□□□□ -2.17
Sf3b1Q99NB9 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.5□□□□□ -2.17
Sf3b1Q99NB9 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.5□□□□□ -2.17
Sf3b1Q99NB9 Gm25992-201ENSMUST00000102437 109 ntBASIC1.5□□□□□ -2.17
Sf3b1Q99NB9 Gm15443-201ENSMUST00000118947 820 ntBASIC1.5□□□□□ -2.17
Sf3b1Q99NB9 Mir3057-201ENSMUST00000175040 91 ntBASIC1.5□□□□□ -2.17
Sf3b1Q99NB9 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 98.6 ms