Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm5224-201ENSMUST00000183060 350 ntBASIC2.81□□□□□ -1.96
Clrn1Q8K445 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.81□□□□□ -1.96
Clrn1Q8K445 Igkv1-115-201ENSMUST00000198714 302 ntBASIC2.81□□□□□ -1.96
Clrn1Q8K445 Gm45013-201ENSMUST00000206883 178 ntBASIC2.81□□□□□ -1.96
Clrn1Q8K445 Gm45116-201ENSMUST00000207392 275 ntBASIC2.81□□□□□ -1.96
Clrn1Q8K445 Gm45445-201ENSMUST00000209586 232 ntBASIC2.81□□□□□ -1.96
Clrn1Q8K445 Gm9712-201ENSMUST00000210842 311 ntBASIC2.81□□□□□ -1.96
Clrn1Q8K445 Gm19563-201ENSMUST00000222031 270 ntBASIC2.81□□□□□ -1.96
Clrn1Q8K445 AC154282.1-201ENSMUST00000223154 265 ntBASIC2.81□□□□□ -1.96
Clrn1Q8K445 Gm4945-201ENSMUST00000075152 453 ntBASIC2.81□□□□□ -1.96
Clrn1Q8K445 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC2.81□□□□□ -1.96
Clrn1Q8K445 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Clrn1Q8K445 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Clrn1Q8K445 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
Clrn1Q8K445 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC2.81□□□□□ -1.96
Clrn1Q8K445 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Clrn1Q8K445 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.8□□□□□ -1.96
Clrn1Q8K445 AC153964.2-201ENSMUST00000217704 2474 ntBASIC2.8□□□□□ -1.96
Clrn1Q8K445 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Clrn1Q8K445 Gm23642-201ENSMUST00000157858 258 ntBASIC2.8□□□□□ -1.96
Clrn1Q8K445 Gm22075-201ENSMUST00000158599 192 ntBASIC2.8□□□□□ -1.96
Clrn1Q8K445 Gm17161-201ENSMUST00000169187 524 ntBASIC2.8□□□□□ -1.96
Clrn1Q8K445 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC2.8□□□□□ -1.96
Clrn1Q8K445 Mir7578-201ENSMUST00000183455 82 ntBASIC2.8□□□□□ -1.96
Clrn1Q8K445 Gm34139-201ENSMUST00000196166 294 ntBASIC2.8□□□□□ -1.96
Clrn1Q8K445 Gm44024-201ENSMUST00000203008 476 ntBASIC2.8□□□□□ -1.96
Clrn1Q8K445 Gm25204-201ENSMUST00000082843 106 ntBASIC2.8□□□□□ -1.96
Clrn1Q8K445 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.8□□□□□ -1.96
Clrn1Q8K445 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Clrn1Q8K445 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.8□□□□□ -1.96
Clrn1Q8K445 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Clrn1Q8K445 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Clrn1Q8K445 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Clrn1Q8K445 Gm26135-201ENSMUST00000101993 72 ntBASIC2.79□□□□□ -1.96
Clrn1Q8K445 Gm22678-201ENSMUST00000116974 101 ntBASIC2.79□□□□□ -1.96
Clrn1Q8K445 Gm23716-201ENSMUST00000157348 144 ntBASIC2.79□□□□□ -1.96
Clrn1Q8K445 Snord50b-201ENSMUST00000178497 72 ntBASIC2.79□□□□□ -1.96
Clrn1Q8K445 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC2.79□□□□□ -1.96
Clrn1Q8K445 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC2.79□□□□□ -1.96
Clrn1Q8K445 Mir1291-201ENSMUST00000199842 117 ntBASIC2.79□□□□□ -1.96
Clrn1Q8K445 Gm44600-201ENSMUST00000208540 111 ntBASIC2.79□□□□□ -1.96
Clrn1Q8K445 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.79□□□□□ -1.96
Clrn1Q8K445 CT030687.1-201ENSMUST00000221854 162 ntBASIC2.79□□□□□ -1.96
Clrn1Q8K445 Snora34-201ENSMUST00000083402 138 ntBASIC2.79□□□□□ -1.96
Clrn1Q8K445 Gm38083-201ENSMUST00000194758 3498 ntBASIC2.79□□□□□ -1.96
Clrn1Q8K445 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Clrn1Q8K445 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Clrn1Q8K445 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Clrn1Q8K445 Gm22939-201ENSMUST00000103958 131 ntBASIC2.78□□□□□ -1.96
Clrn1Q8K445 Gm22023-201ENSMUST00000104354 130 ntBASIC2.78□□□□□ -1.96
Clrn1Q8K445 Gm23183-201ENSMUST00000122595 323 ntBASIC2.78□□□□□ -1.96
Clrn1Q8K445 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC2.78□□□□□ -1.96
Clrn1Q8K445 Gm37428-201ENSMUST00000193886 137 ntBASIC2.78□□□□□ -1.96
Clrn1Q8K445 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Clrn1Q8K445 AC154994.1-201ENSMUST00000217395 302 ntBASIC2.78□□□□□ -1.96
Clrn1Q8K445 Gm25895-201ENSMUST00000083714 100 ntBASIC2.78□□□□□ -1.96
Clrn1Q8K445 Gm42448-201ENSMUST00000197122 2644 ntBASIC2.78□□□□□ -1.96
Clrn1Q8K445 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Clrn1Q8K445 Gm37402-201ENSMUST00000194525 5000 ntBASIC2.78□□□□□ -1.97
Clrn1Q8K445 Gm44846-201ENSMUST00000207127 3243 ntBASIC2.78□□□□□ -1.97
Clrn1Q8K445 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
Clrn1Q8K445 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Clrn1Q8K445 Gm25308-201ENSMUST00000104171 158 ntBASIC2.77□□□□□ -1.97
Clrn1Q8K445 Gm14973-201ENSMUST00000117248 255 ntBASIC2.77□□□□□ -1.97
Clrn1Q8K445 Gm25066-201ENSMUST00000158145 123 ntBASIC2.77□□□□□ -1.97
Clrn1Q8K445 Gm22606-201ENSMUST00000158290 103 ntBASIC2.77□□□□□ -1.97
Clrn1Q8K445 Gm26405-201ENSMUST00000158495 100 ntBASIC2.77□□□□□ -1.97
Clrn1Q8K445 Gm26022-201ENSMUST00000158663 108 ntBASIC2.77□□□□□ -1.97
Clrn1Q8K445 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.77□□□□□ -1.97
Clrn1Q8K445 Mir3106-201ENSMUST00000175401 82 ntBASIC2.77□□□□□ -1.97
Clrn1Q8K445 Gm20613-201ENSMUST00000175828 345 ntBASIC2.77□□□□□ -1.97
Clrn1Q8K445 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Clrn1Q8K445 Gm29553-201ENSMUST00000189692 279 ntBASIC2.77□□□□□ -1.97
Clrn1Q8K445 Gm46233-201ENSMUST00000217831 449 ntBASIC2.77□□□□□ -1.97
Clrn1Q8K445 AC158631.1-201ENSMUST00000219202 138 ntBASIC2.77□□□□□ -1.97
Clrn1Q8K445 AC153646.2-201ENSMUST00000220516 109 ntBASIC2.77□□□□□ -1.97
Clrn1Q8K445 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.77□□□□□ -1.97
Clrn1Q8K445 Gm23738-201ENSMUST00000082828 171 ntBASIC2.77□□□□□ -1.97
Clrn1Q8K445 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.77□□□□□ -1.97
Clrn1Q8K445 Gm45130-201ENSMUST00000207574 3388 ntBASIC2.77□□□□□ -1.97
Clrn1Q8K445 Gm27047-201ENSMUST00000183072 1819 ntBASIC2.77□□□□□ -1.97
Clrn1Q8K445 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Clrn1Q8K445 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Clrn1Q8K445 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Clrn1Q8K445 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.76□□□□□ -1.97
Clrn1Q8K445 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC2.76□□□□□ -1.97
Clrn1Q8K445 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Clrn1Q8K445 Gm24896-201ENSMUST00000122741 135 ntBASIC2.76□□□□□ -1.97
Clrn1Q8K445 Gm15733-201ENSMUST00000132957 242 ntBASIC2.76□□□□□ -1.97
Clrn1Q8K445 Gm24787-201ENSMUST00000157380 123 ntBASIC2.76□□□□□ -1.97
Clrn1Q8K445 Gm23182-201ENSMUST00000158688 135 ntBASIC2.76□□□□□ -1.97
Clrn1Q8K445 Gm43217-201ENSMUST00000199513 367 ntBASIC2.76□□□□□ -1.97
Clrn1Q8K445 Gm26493-201ENSMUST00000083155 136 ntBASIC2.76□□□□□ -1.97
Clrn1Q8K445 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
Clrn1Q8K445 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Clrn1Q8K445 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Clrn1Q8K445 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
Clrn1Q8K445 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
Clrn1Q8K445 Gm42862-201ENSMUST00000197494 2621 ntBASIC2.75□□□□□ -1.97
Clrn1Q8K445 Gm24890-201ENSMUST00000104389 102 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms