Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm23120-201ENSMUST00000157654 287 ntBASIC0.85□□□□□ -2.27
Ccdc28aQ8CEI3 Gm24191-201ENSMUST00000157977 122 ntBASIC0.85□□□□□ -2.27
Ccdc28aQ8CEI3 Gm26405-201ENSMUST00000158495 100 ntBASIC0.85□□□□□ -2.27
Ccdc28aQ8CEI3 Gm26501-201ENSMUST00000178307 107 ntBASIC0.85□□□□□ -2.27
Ccdc28aQ8CEI3 Gm22166-201ENSMUST00000178419 121 ntBASIC0.85□□□□□ -2.27
Ccdc28aQ8CEI3 Gm23288-201ENSMUST00000179213 121 ntBASIC0.85□□□□□ -2.27
Ccdc28aQ8CEI3 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
Ccdc28aQ8CEI3 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC0.85□□□□□ -2.27
Ccdc28aQ8CEI3 AC192333.2-201ENSMUST00000224771 196 ntBASIC0.85□□□□□ -2.27
Ccdc28aQ8CEI3 AC133156.1-202ENSMUST00000227284 363 ntBASIC0.85□□□□□ -2.27
Ccdc28aQ8CEI3 AC170600.1-201ENSMUST00000228763 277 ntBASIC0.85□□□□□ -2.27
Ccdc28aQ8CEI3 Gm25586-201ENSMUST00000082499 112 ntBASIC0.85□□□□□ -2.27
Ccdc28aQ8CEI3 Gm24623-201ENSMUST00000082616 194 ntBASIC0.85□□□□□ -2.27
Ccdc28aQ8CEI3 Gm22785-201ENSMUST00000104087 132 ntBASIC0.84□□□□□ -2.27
Ccdc28aQ8CEI3 Gm24282-201ENSMUST00000104232 66 ntBASIC0.84□□□□□ -2.27
Ccdc28aQ8CEI3 Gm22221-201ENSMUST00000157362 103 ntBASIC0.84□□□□□ -2.27
Ccdc28aQ8CEI3 Gm26150-201ENSMUST00000157426 151 ntBASIC0.84□□□□□ -2.27
Ccdc28aQ8CEI3 Gm22233-201ENSMUST00000157464 114 ntBASIC0.84□□□□□ -2.27
Ccdc28aQ8CEI3 Gm25868-201ENSMUST00000158253 114 ntBASIC0.84□□□□□ -2.27
Ccdc28aQ8CEI3 Gm16038-201ENSMUST00000159317 193 ntBASIC0.84□□□□□ -2.27
Ccdc28aQ8CEI3 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC0.84□□□□□ -2.27
Ccdc28aQ8CEI3 Gm22308-201ENSMUST00000177609 107 ntBASIC0.84□□□□□ -2.27
Ccdc28aQ8CEI3 Gm24390-201ENSMUST00000179578 62 ntBASIC0.84□□□□□ -2.27
Ccdc28aQ8CEI3 Mir195b-201ENSMUST00000184814 97 ntBASIC0.84□□□□□ -2.27
Ccdc28aQ8CEI3 Gm29005-201ENSMUST00000186773 320 ntBASIC0.84□□□□□ -2.27
Ccdc28aQ8CEI3 Trbv22-201ENSMUST00000191697 291 ntBASIC0.84□□□□□ -2.27
Ccdc28aQ8CEI3 Gm44337-201ENSMUST00000196553 114 ntBASIC0.84□□□□□ -2.27
Ccdc28aQ8CEI3 Gm23370-201ENSMUST00000199545 130 ntBASIC0.84□□□□□ -2.27
Ccdc28aQ8CEI3 Gm44429-201ENSMUST00000203542 186 ntBASIC0.84□□□□□ -2.27
Ccdc28aQ8CEI3 Gm35736-201ENSMUST00000203681 313 ntBASIC0.84□□□□□ -2.27
Ccdc28aQ8CEI3 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC0.84□□□□□ -2.27
Ccdc28aQ8CEI3 AC124772.1-201ENSMUST00000221325 151 ntBASIC0.84□□□□□ -2.27
Ccdc28aQ8CEI3 AC167669.4-201ENSMUST00000225967 140 ntBASIC0.84□□□□□ -2.27
Ccdc28aQ8CEI3 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
Ccdc28aQ8CEI3 Gm22544-201ENSMUST00000104349 127 ntBASIC0.83□□□□□ -2.28
Ccdc28aQ8CEI3 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.83□□□□□ -2.28
Ccdc28aQ8CEI3 Gm23893-201ENSMUST00000158106 134 ntBASIC0.83□□□□□ -2.28
Ccdc28aQ8CEI3 Gm24221-201ENSMUST00000158833 313 ntBASIC0.83□□□□□ -2.28
Ccdc28aQ8CEI3 Gm25163-201ENSMUST00000158905 104 ntBASIC0.83□□□□□ -2.28
Ccdc28aQ8CEI3 Mir3569-201ENSMUST00000185080 58 ntBASIC0.83□□□□□ -2.28
Ccdc28aQ8CEI3 Gm38280-201ENSMUST00000192610 158 ntBASIC0.83□□□□□ -2.28
Ccdc28aQ8CEI3 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC0.83□□□□□ -2.28
Ccdc28aQ8CEI3 Gm38041-201ENSMUST00000194445 661 ntBASIC0.83□□□□□ -2.28
Ccdc28aQ8CEI3 Gm34073-201ENSMUST00000195736 212 ntBASIC0.83□□□□□ -2.28
Ccdc28aQ8CEI3 Mir6962-201ENSMUST00000199512 63 ntBASIC0.83□□□□□ -2.28
Ccdc28aQ8CEI3 Gm45878-201ENSMUST00000211839 241 ntBASIC0.83□□□□□ -2.28
Ccdc28aQ8CEI3 AC144733.1-201ENSMUST00000222893 1289 ntBASIC0.83□□□□□ -2.28
Ccdc28aQ8CEI3 AC132918.1-201ENSMUST00000227877 925 ntBASIC0.83□□□□□ -2.28
Ccdc28aQ8CEI3 Snord118-201ENSMUST00000082965 135 ntBASIC0.83□□□□□ -2.28
Ccdc28aQ8CEI3 Snord1a-201ENSMUST00000083160 74 ntBASIC0.83□□□□□ -2.28
Ccdc28aQ8CEI3 Gm24615-201ENSMUST00000083268 113 ntBASIC0.83□□□□□ -2.28
Ccdc28aQ8CEI3 Gm25128-201ENSMUST00000083339 76 ntBASIC0.83□□□□□ -2.28
Ccdc28aQ8CEI3 Gm24338-201ENSMUST00000104205 127 ntBASIC0.82□□□□□ -2.28
Ccdc28aQ8CEI3 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
Ccdc28aQ8CEI3 Gm24726-201ENSMUST00000158232 121 ntBASIC0.82□□□□□ -2.28
Ccdc28aQ8CEI3 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC0.82□□□□□ -2.28
Ccdc28aQ8CEI3 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC0.82□□□□□ -2.28
Ccdc28aQ8CEI3 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC0.82□□□□□ -2.28
Ccdc28aQ8CEI3 Gm8151-201ENSMUST00000184817 871 ntBASIC0.82□□□□□ -2.28
Ccdc28aQ8CEI3 Gm19901-201ENSMUST00000192191 495 ntBASIC0.82□□□□□ -2.28
Ccdc28aQ8CEI3 Gm37658-201ENSMUST00000192672 315 ntBASIC0.82□□□□□ -2.28
Ccdc28aQ8CEI3 Gm37693-201ENSMUST00000194562 234 ntBASIC0.82□□□□□ -2.28
Ccdc28aQ8CEI3 Gm44301-201ENSMUST00000200362 143 ntBASIC0.82□□□□□ -2.28
Ccdc28aQ8CEI3 Gm42857-201ENSMUST00000200823 339 ntBASIC0.82□□□□□ -2.28
Ccdc28aQ8CEI3 AL772265.1-201ENSMUST00000214379 305 ntBASIC0.82□□□□□ -2.28
Ccdc28aQ8CEI3 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Ccdc28aQ8CEI3 Gm24536-201ENSMUST00000083144 107 ntBASIC0.82□□□□□ -2.28
Ccdc28aQ8CEI3 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC0.82□□□□□ -2.28
Ccdc28aQ8CEI3 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
Ccdc28aQ8CEI3 Gm42718-201ENSMUST00000197319 2681 ntBASIC0.81□□□□□ -2.28
Ccdc28aQ8CEI3 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
Ccdc28aQ8CEI3 Gm24588-201ENSMUST00000116696 83 ntBASIC0.81□□□□□ -2.28
Ccdc28aQ8CEI3 Gm25507-201ENSMUST00000116981 144 ntBASIC0.81□□□□□ -2.28
Ccdc28aQ8CEI3 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC0.81□□□□□ -2.28
Ccdc28aQ8CEI3 Gm14766-201ENSMUST00000121689 367 ntBASIC0.81□□□□□ -2.28
Ccdc28aQ8CEI3 Gm25543-201ENSMUST00000122678 312 ntBASIC0.81□□□□□ -2.28
Ccdc28aQ8CEI3 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC0.81□□□□□ -2.28
Ccdc28aQ8CEI3 Gm25054-201ENSMUST00000157370 97 ntBASIC0.81□□□□□ -2.28
Ccdc28aQ8CEI3 Gm23277-201ENSMUST00000157914 136 ntBASIC0.81□□□□□ -2.28
Ccdc28aQ8CEI3 Gm23411-201ENSMUST00000157988 62 ntBASIC0.81□□□□□ -2.28
Ccdc28aQ8CEI3 Gm24942-201ENSMUST00000158328 114 ntBASIC0.81□□□□□ -2.28
Ccdc28aQ8CEI3 Rnu7-201ENSMUST00000158458 62 ntBASIC0.81□□□□□ -2.28
Ccdc28aQ8CEI3 Gm22263-201ENSMUST00000180060 104 ntBASIC0.81□□□□□ -2.28
Ccdc28aQ8CEI3 Gm27898-201ENSMUST00000183987 80 ntBASIC0.81□□□□□ -2.28
Ccdc28aQ8CEI3 Gm38323-201ENSMUST00000192450 210 ntBASIC0.81□□□□□ -2.28
Ccdc28aQ8CEI3 Gm42834-201ENSMUST00000196845 256 ntBASIC0.81□□□□□ -2.28
Ccdc28aQ8CEI3 Gm43035-201ENSMUST00000197626 517 ntBASIC0.81□□□□□ -2.28
Ccdc28aQ8CEI3 Gm44282-201ENSMUST00000203199 190 ntBASIC0.81□□□□□ -2.28
Ccdc28aQ8CEI3 Gm45315-201ENSMUST00000209283 333 ntBASIC0.81□□□□□ -2.28
Ccdc28aQ8CEI3 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
Ccdc28aQ8CEI3 AC153541.1-201ENSMUST00000213786 294 ntBASIC0.81□□□□□ -2.28
Ccdc28aQ8CEI3 Gm7495-201ENSMUST00000215099 426 ntBASIC0.81□□□□□ -2.28
Ccdc28aQ8CEI3 AC127371.3-201ENSMUST00000228129 415 ntBASIC0.81□□□□□ -2.28
Ccdc28aQ8CEI3 Gm26224-201ENSMUST00000082506 80 ntBASIC0.81□□□□□ -2.28
Ccdc28aQ8CEI3 Gm23735-201ENSMUST00000082551 134 ntBASIC0.81□□□□□ -2.28
Ccdc28aQ8CEI3 Gm25357-201ENSMUST00000082745 72 ntBASIC0.81□□□□□ -2.28
Ccdc28aQ8CEI3 Gm25859-201ENSMUST00000083710 91 ntBASIC0.81□□□□□ -2.28
Ccdc28aQ8CEI3 Gm25896-201ENSMUST00000083713 136 ntBASIC0.81□□□□□ -2.28
Ccdc28aQ8CEI3 Snord35a-201ENSMUST00000083884 90 ntBASIC0.81□□□□□ -2.28
Ccdc28aQ8CEI3 Mir374b-201ENSMUST00000102314 95 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms