Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.2□□□□□ -2.06
Nup88Q8CEC0 Gm43578-201ENSMUST00000201250 459 ntBASIC2.2□□□□□ -2.06
Nup88Q8CEC0 Gm44960-201ENSMUST00000207403 141 ntBASIC2.2□□□□□ -2.06
Nup88Q8CEC0 AL590614.1-201ENSMUST00000226037 268 ntBASIC2.2□□□□□ -2.06
Nup88Q8CEC0 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Nup88Q8CEC0 Gm24765-201ENSMUST00000083691 103 ntBASIC2.2□□□□□ -2.06
Nup88Q8CEC0 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Nup88Q8CEC0 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.19□□□□□ -2.06
Nup88Q8CEC0 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Nup88Q8CEC0 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Nup88Q8CEC0 Gm26249-201ENSMUST00000116708 118 ntBASIC2.19□□□□□ -2.06
Nup88Q8CEC0 Gm14803-201ENSMUST00000117163 361 ntBASIC2.19□□□□□ -2.06
Nup88Q8CEC0 Gm12351-201ENSMUST00000118727 292 ntBASIC2.19□□□□□ -2.06
Nup88Q8CEC0 Gm13518-201ENSMUST00000120018 233 ntBASIC2.19□□□□□ -2.06
Nup88Q8CEC0 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC2.19□□□□□ -2.06
Nup88Q8CEC0 Gm28058-201ENSMUST00000186421 264 ntBASIC2.19□□□□□ -2.06
Nup88Q8CEC0 Gm29657-201ENSMUST00000189807 342 ntBASIC2.19□□□□□ -2.06
Nup88Q8CEC0 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.19□□□□□ -2.06
Nup88Q8CEC0 AC122834.1-201ENSMUST00000227182 425 ntBASIC2.19□□□□□ -2.06
Nup88Q8CEC0 Gm26175-201ENSMUST00000083794 131 ntBASIC2.19□□□□□ -2.06
Nup88Q8CEC0 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Nup88Q8CEC0 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Nup88Q8CEC0 Gm11254-201ENSMUST00000122368 653 ntBASIC2.18□□□□□ -2.06
Nup88Q8CEC0 Gm22447-201ENSMUST00000158155 92 ntBASIC2.18□□□□□ -2.06
Nup88Q8CEC0 Gm22945-201ENSMUST00000158557 157 ntBASIC2.18□□□□□ -2.06
Nup88Q8CEC0 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.18□□□□□ -2.06
Nup88Q8CEC0 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC2.18□□□□□ -2.06
Nup88Q8CEC0 Gm10033-201ENSMUST00000072427 1813 ntBASIC2.18□□□□□ -2.06
Nup88Q8CEC0 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Nup88Q8CEC0 AC121844.2-201ENSMUST00000219067 2066 ntBASIC2.18□□□□□ -2.06
Nup88Q8CEC0 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.17□□□□□ -2.06
Nup88Q8CEC0 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.17□□□□□ -2.06
Nup88Q8CEC0 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Nup88Q8CEC0 Mir1b-201ENSMUST00000117012 122 ntBASIC2.17□□□□□ -2.06
Nup88Q8CEC0 Gm12785-201ENSMUST00000122052 172 ntBASIC2.17□□□□□ -2.06
Nup88Q8CEC0 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Nup88Q8CEC0 Gm22843-201ENSMUST00000157710 134 ntBASIC2.17□□□□□ -2.06
Nup88Q8CEC0 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC2.17□□□□□ -2.06
Nup88Q8CEC0 Gm23289-201ENSMUST00000175615 108 ntBASIC2.17□□□□□ -2.06
Nup88Q8CEC0 Gm27898-201ENSMUST00000183987 80 ntBASIC2.17□□□□□ -2.06
Nup88Q8CEC0 Gm18357-201ENSMUST00000188184 580 ntBASIC2.17□□□□□ -2.06
Nup88Q8CEC0 Gm29167-201ENSMUST00000190024 377 ntBASIC2.17□□□□□ -2.06
Nup88Q8CEC0 Gm44408-201ENSMUST00000200205 66 ntBASIC2.17□□□□□ -2.06
Nup88Q8CEC0 Gm43865-201ENSMUST00000204721 127 ntBASIC2.17□□□□□ -2.06
Nup88Q8CEC0 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC2.17□□□□□ -2.06
Nup88Q8CEC0 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC2.17□□□□□ -2.06
Nup88Q8CEC0 AL603630.1-201ENSMUST00000214781 147 ntBASIC2.17□□□□□ -2.06
Nup88Q8CEC0 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC2.17□□□□□ -2.06
Nup88Q8CEC0 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.17□□□□□ -2.06
Nup88Q8CEC0 Gm25636-201ENSMUST00000082666 133 ntBASIC2.17□□□□□ -2.06
Nup88Q8CEC0 Mir133a-1-201ENSMUST00000083465 68 ntBASIC2.17□□□□□ -2.06
Nup88Q8CEC0 Gm22193-201ENSMUST00000116868 76 ntBASIC2.16□□□□□ -2.06
Nup88Q8CEC0 Gm14307-201ENSMUST00000118930 291 ntBASIC2.16□□□□□ -2.06
Nup88Q8CEC0 Gm12926-201ENSMUST00000121158 409 ntBASIC2.16□□□□□ -2.06
Nup88Q8CEC0 Gm14297-201ENSMUST00000129110 291 ntBASIC2.16□□□□□ -2.06
Nup88Q8CEC0 Gm16362-201ENSMUST00000135189 214 ntBASIC2.16□□□□□ -2.06
Nup88Q8CEC0 Gm16358-201ENSMUST00000146046 210 ntBASIC2.16□□□□□ -2.06
Nup88Q8CEC0 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Nup88Q8CEC0 Gm23469-201ENSMUST00000157131 104 ntBASIC2.16□□□□□ -2.06
Nup88Q8CEC0 Gm23858-201ENSMUST00000158384 106 ntBASIC2.16□□□□□ -2.06
Nup88Q8CEC0 Gm25051-201ENSMUST00000158602 249 ntBASIC2.16□□□□□ -2.06
Nup88Q8CEC0 Gm24656-201ENSMUST00000177548 132 ntBASIC2.16□□□□□ -2.06
Nup88Q8CEC0 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC2.16□□□□□ -2.06
Nup88Q8CEC0 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC2.16□□□□□ -2.06
Nup88Q8CEC0 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC2.16□□□□□ -2.06
Nup88Q8CEC0 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC2.16□□□□□ -2.06
Nup88Q8CEC0 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC2.16□□□□□ -2.06
Nup88Q8CEC0 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC2.16□□□□□ -2.06
Nup88Q8CEC0 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC2.16□□□□□ -2.06
Nup88Q8CEC0 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC2.16□□□□□ -2.06
Nup88Q8CEC0 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Nup88Q8CEC0 Mir7679-201ENSMUST00000183379 63 ntBASIC2.16□□□□□ -2.06
Nup88Q8CEC0 AC155712.1-201ENSMUST00000219704 160 ntBASIC2.16□□□□□ -2.06
Nup88Q8CEC0 Gm25813-201ENSMUST00000082748 191 ntBASIC2.16□□□□□ -2.06
Nup88Q8CEC0 Gm24152-201ENSMUST00000082764 163 ntBASIC2.16□□□□□ -2.06
Nup88Q8CEC0 Gm22683-201ENSMUST00000082854 137 ntBASIC2.16□□□□□ -2.06
Nup88Q8CEC0 Mir300-201ENSMUST00000083485 79 ntBASIC2.16□□□□□ -2.06
Nup88Q8CEC0 Mir32-201ENSMUST00000083610 70 ntBASIC2.16□□□□□ -2.06
Nup88Q8CEC0 Gm42639-201ENSMUST00000197061 1871 ntBASIC2.16□□□□□ -2.06
Nup88Q8CEC0 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Nup88Q8CEC0 Gm4746-201ENSMUST00000120395 2406 ntBASIC2.15□□□□□ -2.07
Nup88Q8CEC0 Gm23766-201ENSMUST00000103894 80 ntBASIC2.15□□□□□ -2.07
Nup88Q8CEC0 Gm25848-201ENSMUST00000116790 144 ntBASIC2.15□□□□□ -2.07
Nup88Q8CEC0 Gm26255-201ENSMUST00000122492 103 ntBASIC2.15□□□□□ -2.07
Nup88Q8CEC0 Gm25781-201ENSMUST00000122527 84 ntBASIC2.15□□□□□ -2.07
Nup88Q8CEC0 Gm24783-201ENSMUST00000157639 100 ntBASIC2.15□□□□□ -2.07
Nup88Q8CEC0 Gm24737-201ENSMUST00000158861 100 ntBASIC2.15□□□□□ -2.07
Nup88Q8CEC0 Gm37313-201ENSMUST00000191673 290 ntBASIC2.15□□□□□ -2.07
Nup88Q8CEC0 Gm42960-201ENSMUST00000202160 241 ntBASIC2.15□□□□□ -2.07
Nup88Q8CEC0 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC2.15□□□□□ -2.07
Nup88Q8CEC0 CT025602.1-201ENSMUST00000227281 382 ntBASIC2.15□□□□□ -2.07
Nup88Q8CEC0 AC163646.2-201ENSMUST00000227962 141 ntBASIC2.15□□□□□ -2.07
Nup88Q8CEC0 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Nup88Q8CEC0 Mir759-201ENSMUST00000103254 98 ntBASIC2.14□□□□□ -2.07
Nup88Q8CEC0 Mir465b-1-201ENSMUST00000103940 79 ntBASIC2.14□□□□□ -2.07
Nup88Q8CEC0 Gm22021-201ENSMUST00000104353 107 ntBASIC2.14□□□□□ -2.07
Nup88Q8CEC0 Mir465b-2-201ENSMUST00000104662 79 ntBASIC2.14□□□□□ -2.07
Nup88Q8CEC0 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.14□□□□□ -2.07
Nup88Q8CEC0 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.14□□□□□ -2.07
Nup88Q8CEC0 Gm24618-201ENSMUST00000177718 94 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 134.1 ms