Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Atg4aQ8C9S8 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Atg4aQ8C9S8 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.32□□□□□ -2.04
Atg4aQ8C9S8 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.31□□□□□ -2.04
Atg4aQ8C9S8 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.31□□□□□ -2.04
Atg4aQ8C9S8 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Atg4aQ8C9S8 Gm26077-201ENSMUST00000104064 123 ntBASIC2.31□□□□□ -2.04
Atg4aQ8C9S8 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Atg4aQ8C9S8 Mir669g-201ENSMUST00000116809 123 ntBASIC2.31□□□□□ -2.04
Atg4aQ8C9S8 Gm11904-201ENSMUST00000120562 248 ntBASIC2.31□□□□□ -2.04
Atg4aQ8C9S8 Gm15213-201ENSMUST00000122098 216 ntBASIC2.31□□□□□ -2.04
Atg4aQ8C9S8 Gm14770-201ENSMUST00000122197 312 ntBASIC2.31□□□□□ -2.04
Atg4aQ8C9S8 Gm24629-201ENSMUST00000122762 89 ntBASIC2.31□□□□□ -2.04
Atg4aQ8C9S8 Gm23474-201ENSMUST00000158884 75 ntBASIC2.31□□□□□ -2.04
Atg4aQ8C9S8 Ear-ps8-201ENSMUST00000161935 354 ntBASIC2.31□□□□□ -2.04
Atg4aQ8C9S8 Gm17161-201ENSMUST00000169187 524 ntBASIC2.31□□□□□ -2.04
Atg4aQ8C9S8 Gm27761-201ENSMUST00000184091 131 ntBASIC2.31□□□□□ -2.04
Atg4aQ8C9S8 Gm44429-201ENSMUST00000203542 186 ntBASIC2.31□□□□□ -2.04
Atg4aQ8C9S8 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Atg4aQ8C9S8 Gm25078-201ENSMUST00000082530 107 ntBASIC2.31□□□□□ -2.04
Atg4aQ8C9S8 Gm24316-201ENSMUST00000083041 107 ntBASIC2.31□□□□□ -2.04
Atg4aQ8C9S8 Gm25141-201ENSMUST00000083177 107 ntBASIC2.31□□□□□ -2.04
Atg4aQ8C9S8 Gm23040-201ENSMUST00000083869 163 ntBASIC2.31□□□□□ -2.04
Atg4aQ8C9S8 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
Atg4aQ8C9S8 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Atg4aQ8C9S8 Mdga2-203ENSMUST00000113942 423 ntBASIC2.3□□□□□ -2.04
Atg4aQ8C9S8 Gm26156-201ENSMUST00000116999 123 ntBASIC2.3□□□□□ -2.04
Atg4aQ8C9S8 Gm13967-201ENSMUST00000120404 380 ntBASIC2.3□□□□□ -2.04
Atg4aQ8C9S8 Gm5396-201ENSMUST00000121222 532 ntBASIC2.3□□□□□ -2.04
Atg4aQ8C9S8 Gm16355-201ENSMUST00000128606 231 ntBASIC2.3□□□□□ -2.04
Atg4aQ8C9S8 Gm25625-201ENSMUST00000157221 96 ntBASIC2.3□□□□□ -2.04
Atg4aQ8C9S8 Gm25450-201ENSMUST00000179144 107 ntBASIC2.3□□□□□ -2.04
Atg4aQ8C9S8 Mir6375-201ENSMUST00000197176 95 ntBASIC2.3□□□□□ -2.04
Atg4aQ8C9S8 Gm44409-201ENSMUST00000198810 166 ntBASIC2.3□□□□□ -2.04
Atg4aQ8C9S8 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC2.3□□□□□ -2.04
Atg4aQ8C9S8 AC145736.2-201ENSMUST00000216305 365 ntBASIC2.3□□□□□ -2.04
Atg4aQ8C9S8 Gm22154-201ENSMUST00000083844 131 ntBASIC2.3□□□□□ -2.04
Atg4aQ8C9S8 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Atg4aQ8C9S8 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Atg4aQ8C9S8 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.3□□□□□ -2.04
Atg4aQ8C9S8 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.29□□□□□ -2.04
Atg4aQ8C9S8 Gm14782-201ENSMUST00000120151 195 ntBASIC2.29□□□□□ -2.04
Atg4aQ8C9S8 Gm24385-201ENSMUST00000122694 350 ntBASIC2.29□□□□□ -2.04
Atg4aQ8C9S8 Gm24388-201ENSMUST00000177872 107 ntBASIC2.29□□□□□ -2.04
Atg4aQ8C9S8 Gm25020-201ENSMUST00000178071 107 ntBASIC2.29□□□□□ -2.04
Atg4aQ8C9S8 Gm23190-201ENSMUST00000180307 64 ntBASIC2.29□□□□□ -2.04
Atg4aQ8C9S8 Gm27521-201ENSMUST00000184022 64 ntBASIC2.29□□□□□ -2.04
Atg4aQ8C9S8 AC121942.2-201ENSMUST00000223824 600 ntBASIC2.29□□□□□ -2.04
Atg4aQ8C9S8 AC167669.4-201ENSMUST00000225967 140 ntBASIC2.29□□□□□ -2.04
Atg4aQ8C9S8 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.29□□□□□ -2.04
Atg4aQ8C9S8 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.29□□□□□ -2.04
Atg4aQ8C9S8 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Atg4aQ8C9S8 Gm14803-201ENSMUST00000117163 361 ntBASIC2.28□□□□□ -2.04
Atg4aQ8C9S8 Gm14602-201ENSMUST00000118625 340 ntBASIC2.28□□□□□ -2.04
Atg4aQ8C9S8 Gm13992-201ENSMUST00000120558 156 ntBASIC2.28□□□□□ -2.04
Atg4aQ8C9S8 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC2.28□□□□□ -2.04
Atg4aQ8C9S8 Gm27723-201ENSMUST00000157398 63 ntBASIC2.28□□□□□ -2.04
Atg4aQ8C9S8 Gm23033-201ENSMUST00000157996 134 ntBASIC2.28□□□□□ -2.04
Atg4aQ8C9S8 Mir9-3-201ENSMUST00000175497 90 ntBASIC2.28□□□□□ -2.04
Atg4aQ8C9S8 Gm25457-201ENSMUST00000179509 107 ntBASIC2.28□□□□□ -2.04
Atg4aQ8C9S8 Mir6399-201ENSMUST00000184050 84 ntBASIC2.28□□□□□ -2.04
Atg4aQ8C9S8 Gm44478-201ENSMUST00000204875 114 ntBASIC2.28□□□□□ -2.04
Atg4aQ8C9S8 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.28□□□□□ -2.04
Atg4aQ8C9S8 AC165092.3-201ENSMUST00000223602 282 ntBASIC2.28□□□□□ -2.04
Atg4aQ8C9S8 AC154390.1-201ENSMUST00000225629 277 ntBASIC2.28□□□□□ -2.04
Atg4aQ8C9S8 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.28□□□□□ -2.04
Atg4aQ8C9S8 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
Atg4aQ8C9S8 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
Atg4aQ8C9S8 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Atg4aQ8C9S8 Gm11794-201ENSMUST00000119446 237 ntBASIC2.27□□□□□ -2.05
Atg4aQ8C9S8 Gm11388-201ENSMUST00000120908 159 ntBASIC2.27□□□□□ -2.05
Atg4aQ8C9S8 Defb44-ps-201ENSMUST00000126871 219 ntBASIC2.27□□□□□ -2.05
Atg4aQ8C9S8 Trav20-201ENSMUST00000142754 347 ntBASIC2.27□□□□□ -2.05
Atg4aQ8C9S8 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC2.27□□□□□ -2.05
Atg4aQ8C9S8 Gm22258-201ENSMUST00000177645 94 ntBASIC2.27□□□□□ -2.05
Atg4aQ8C9S8 Gm26032-201ENSMUST00000178535 94 ntBASIC2.27□□□□□ -2.05
Atg4aQ8C9S8 Gm25210-201ENSMUST00000178813 94 ntBASIC2.27□□□□□ -2.05
Atg4aQ8C9S8 Gm25157-201ENSMUST00000178914 94 ntBASIC2.27□□□□□ -2.05
Atg4aQ8C9S8 Gm22046-201ENSMUST00000179027 94 ntBASIC2.27□□□□□ -2.05
Atg4aQ8C9S8 Gm22941-201ENSMUST00000179630 94 ntBASIC2.27□□□□□ -2.05
Atg4aQ8C9S8 Gm25471-201ENSMUST00000180126 94 ntBASIC2.27□□□□□ -2.05
Atg4aQ8C9S8 Mir3535-201ENSMUST00000197651 147 ntBASIC2.27□□□□□ -2.05
Atg4aQ8C9S8 Gm44024-201ENSMUST00000203008 476 ntBASIC2.27□□□□□ -2.05
Atg4aQ8C9S8 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC2.27□□□□□ -2.05
Atg4aQ8C9S8 Gm2829-201ENSMUST00000213121 499 ntBASIC2.27□□□□□ -2.05
Atg4aQ8C9S8 Gm24356-201ENSMUST00000082859 106 ntBASIC2.27□□□□□ -2.05
Atg4aQ8C9S8 Gm26107-201ENSMUST00000083972 107 ntBASIC2.27□□□□□ -2.05
Atg4aQ8C9S8 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC2.27□□□□□ -2.05
Atg4aQ8C9S8 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Atg4aQ8C9S8 Gm15102-201ENSMUST00000118740 1502 ntBASIC2.27□□□□□ -2.05
Atg4aQ8C9S8 Gm24280-201ENSMUST00000104237 134 ntBASIC2.26□□□□□ -2.05
Atg4aQ8C9S8 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC2.26□□□□□ -2.05
Atg4aQ8C9S8 Mir6997-201ENSMUST00000184313 71 ntBASIC2.26□□□□□ -2.05
Atg4aQ8C9S8 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.26□□□□□ -2.05
Atg4aQ8C9S8 Gm26265-201ENSMUST00000083277 135 ntBASIC2.26□□□□□ -2.05
Atg4aQ8C9S8 Gm23451-201ENSMUST00000083328 122 ntBASIC2.26□□□□□ -2.05
Atg4aQ8C9S8 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Atg4aQ8C9S8 AC160115.1-201ENSMUST00000224678 1574 ntBASIC2.26□□□□□ -2.05
Atg4aQ8C9S8 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Atg4aQ8C9S8 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms