Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Ear-ps8-201ENSMUST00000161935 354 ntBASIC2.09□□□□□ -2.07
Tdp1Q8BJ37 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.09□□□□□ -2.07
Tdp1Q8BJ37 Gm17100-201ENSMUST00000168963 272 ntBASIC2.09□□□□□ -2.07
Tdp1Q8BJ37 Gm24308-201ENSMUST00000177773 114 ntBASIC2.09□□□□□ -2.07
Tdp1Q8BJ37 Gm24388-201ENSMUST00000177872 107 ntBASIC2.09□□□□□ -2.07
Tdp1Q8BJ37 Gm28169-201ENSMUST00000190342 345 ntBASIC2.09□□□□□ -2.07
Tdp1Q8BJ37 Gm29490-201ENSMUST00000190923 342 ntBASIC2.09□□□□□ -2.07
Tdp1Q8BJ37 Gm28288-201ENSMUST00000191019 214 ntBASIC2.09□□□□□ -2.07
Tdp1Q8BJ37 Gm37449-201ENSMUST00000193016 270 ntBASIC2.09□□□□□ -2.07
Tdp1Q8BJ37 Gm18658-201ENSMUST00000195558 270 ntBASIC2.09□□□□□ -2.07
Tdp1Q8BJ37 Gm9318-201ENSMUST00000222444 438 ntBASIC2.09□□□□□ -2.07
Tdp1Q8BJ37 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.09□□□□□ -2.07
Tdp1Q8BJ37 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
Tdp1Q8BJ37 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Tdp1Q8BJ37 Gm5396-201ENSMUST00000121222 532 ntBASIC2.08□□□□□ -2.08
Tdp1Q8BJ37 Gm25625-201ENSMUST00000157221 96 ntBASIC2.08□□□□□ -2.08
Tdp1Q8BJ37 Gm22598-201ENSMUST00000157600 127 ntBASIC2.08□□□□□ -2.08
Tdp1Q8BJ37 Gm23579-201ENSMUST00000158528 103 ntBASIC2.08□□□□□ -2.08
Tdp1Q8BJ37 Gm25457-201ENSMUST00000179509 107 ntBASIC2.08□□□□□ -2.08
Tdp1Q8BJ37 Gm26864-201ENSMUST00000181346 156 ntBASIC2.08□□□□□ -2.08
Tdp1Q8BJ37 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.08□□□□□ -2.08
Tdp1Q8BJ37 Gm28257-201ENSMUST00000185244 463 ntBASIC2.08□□□□□ -2.08
Tdp1Q8BJ37 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC2.08□□□□□ -2.08
Tdp1Q8BJ37 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.08□□□□□ -2.08
Tdp1Q8BJ37 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.08□□□□□ -2.08
Tdp1Q8BJ37 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
Tdp1Q8BJ37 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC2.07□□□□□ -2.08
Tdp1Q8BJ37 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Tdp1Q8BJ37 Gm12647-201ENSMUST00000118977 265 ntBASIC2.07□□□□□ -2.08
Tdp1Q8BJ37 Gm13729-201ENSMUST00000120328 406 ntBASIC2.07□□□□□ -2.08
Tdp1Q8BJ37 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.07□□□□□ -2.08
Tdp1Q8BJ37 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.07□□□□□ -2.08
Tdp1Q8BJ37 Gm25956-201ENSMUST00000175115 217 ntBASIC2.07□□□□□ -2.08
Tdp1Q8BJ37 Gm25397-201ENSMUST00000176951 92 ntBASIC2.07□□□□□ -2.08
Tdp1Q8BJ37 Gm25020-201ENSMUST00000178071 107 ntBASIC2.07□□□□□ -2.08
Tdp1Q8BJ37 Gm23003-201ENSMUST00000179948 107 ntBASIC2.07□□□□□ -2.08
Tdp1Q8BJ37 Gm29147-201ENSMUST00000186846 315 ntBASIC2.07□□□□□ -2.08
Tdp1Q8BJ37 Gm29227-201ENSMUST00000187139 315 ntBASIC2.07□□□□□ -2.08
Tdp1Q8BJ37 Gm29034-201ENSMUST00000188099 315 ntBASIC2.07□□□□□ -2.08
Tdp1Q8BJ37 Gm28848-201ENSMUST00000189984 168 ntBASIC2.07□□□□□ -2.08
Tdp1Q8BJ37 Gm28160-201ENSMUST00000191229 315 ntBASIC2.07□□□□□ -2.08
Tdp1Q8BJ37 Gm37129-201ENSMUST00000195791 315 ntBASIC2.07□□□□□ -2.08
Tdp1Q8BJ37 Mir7227-201ENSMUST00000200408 59 ntBASIC2.07□□□□□ -2.08
Tdp1Q8BJ37 Gm45616-201ENSMUST00000211711 319 ntBASIC2.07□□□□□ -2.08
Tdp1Q8BJ37 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.07□□□□□ -2.08
Tdp1Q8BJ37 Gm24044-201ENSMUST00000083107 156 ntBASIC2.07□□□□□ -2.08
Tdp1Q8BJ37 Gm23249-201ENSMUST00000083369 161 ntBASIC2.07□□□□□ -2.08
Tdp1Q8BJ37 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Tdp1Q8BJ37 Mdga2-203ENSMUST00000113942 423 ntBASIC2.06□□□□□ -2.08
Tdp1Q8BJ37 Gm14774-201ENSMUST00000117857 536 ntBASIC2.06□□□□□ -2.08
Tdp1Q8BJ37 Gm26105-201ENSMUST00000157253 190 ntBASIC2.06□□□□□ -2.08
Tdp1Q8BJ37 Gm22447-201ENSMUST00000158155 92 ntBASIC2.06□□□□□ -2.08
Tdp1Q8BJ37 Gm25012-201ENSMUST00000158396 164 ntBASIC2.06□□□□□ -2.08
Tdp1Q8BJ37 Gm24348-201ENSMUST00000158710 130 ntBASIC2.06□□□□□ -2.08
Tdp1Q8BJ37 Gm24225-201ENSMUST00000158825 98 ntBASIC2.06□□□□□ -2.08
Tdp1Q8BJ37 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC2.06□□□□□ -2.08
Tdp1Q8BJ37 Gm23921-201ENSMUST00000175258 107 ntBASIC2.06□□□□□ -2.08
Tdp1Q8BJ37 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Tdp1Q8BJ37 Gm29005-201ENSMUST00000186773 320 ntBASIC2.06□□□□□ -2.08
Tdp1Q8BJ37 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Tdp1Q8BJ37 Gm20923-201ENSMUST00000190009 319 ntBASIC2.06□□□□□ -2.08
Tdp1Q8BJ37 Gm21088-201ENSMUST00000190875 316 ntBASIC2.06□□□□□ -2.08
Tdp1Q8BJ37 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2.06□□□□□ -2.08
Tdp1Q8BJ37 Gm43978-201ENSMUST00000203491 451 ntBASIC2.06□□□□□ -2.08
Tdp1Q8BJ37 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.06□□□□□ -2.08
Tdp1Q8BJ37 Gm19118-201ENSMUST00000222554 98 ntBASIC2.06□□□□□ -2.08
Tdp1Q8BJ37 AC154271.1-201ENSMUST00000224780 383 ntBASIC2.06□□□□□ -2.08
Tdp1Q8BJ37 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Tdp1Q8BJ37 Mir32-201ENSMUST00000083610 70 ntBASIC2.06□□□□□ -2.08
Tdp1Q8BJ37 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC2.06□□□□□ -2.08
Tdp1Q8BJ37 Gm23941-201ENSMUST00000101953 107 ntBASIC2.05□□□□□ -2.08
Tdp1Q8BJ37 Mir301b-201ENSMUST00000102333 97 ntBASIC2.05□□□□□ -2.08
Tdp1Q8BJ37 Gm24630-201ENSMUST00000122768 106 ntBASIC2.05□□□□□ -2.08
Tdp1Q8BJ37 Gm2830-201ENSMUST00000140330 385 ntBASIC2.05□□□□□ -2.08
Tdp1Q8BJ37 Gm23589-201ENSMUST00000157660 105 ntBASIC2.05□□□□□ -2.08
Tdp1Q8BJ37 Gm7592-201ENSMUST00000160674 627 ntBASIC2.05□□□□□ -2.08
Tdp1Q8BJ37 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC2.05□□□□□ -2.08
Tdp1Q8BJ37 Gm43250-201ENSMUST00000196536 273 ntBASIC2.05□□□□□ -2.08
Tdp1Q8BJ37 Gm44024-201ENSMUST00000203008 476 ntBASIC2.05□□□□□ -2.08
Tdp1Q8BJ37 Gm2829-201ENSMUST00000213121 499 ntBASIC2.05□□□□□ -2.08
Tdp1Q8BJ37 Gm23625-201ENSMUST00000082457 100 ntBASIC2.05□□□□□ -2.08
Tdp1Q8BJ37 Gm24316-201ENSMUST00000083041 107 ntBASIC2.05□□□□□ -2.08
Tdp1Q8BJ37 Mir133a-1-201ENSMUST00000083465 68 ntBASIC2.05□□□□□ -2.08
Tdp1Q8BJ37 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.05□□□□□ -2.08
Tdp1Q8BJ37 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC2.05□□□□□ -2.08
Tdp1Q8BJ37 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC2.05□□□□□ -2.08
Tdp1Q8BJ37 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Tdp1Q8BJ37 Gm10033-201ENSMUST00000072427 1813 ntBASIC2.05□□□□□ -2.08
Tdp1Q8BJ37 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Tdp1Q8BJ37 Gm22483-201ENSMUST00000157986 274 ntBASIC2.04□□□□□ -2.08
Tdp1Q8BJ37 Gm24076-201ENSMUST00000158179 94 ntBASIC2.04□□□□□ -2.08
Tdp1Q8BJ37 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC2.04□□□□□ -2.08
Tdp1Q8BJ37 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC2.04□□□□□ -2.08
Tdp1Q8BJ37 AC154552.1-201ENSMUST00000222969 202 ntBASIC2.04□□□□□ -2.08
Tdp1Q8BJ37 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Tdp1Q8BJ37 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
Tdp1Q8BJ37 Gm42639-201ENSMUST00000197061 1871 ntBASIC2.03□□□□□ -2.08
Tdp1Q8BJ37 Gm22761-201ENSMUST00000102278 96 ntBASIC2.03□□□□□ -2.08
Tdp1Q8BJ37 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Tdp1Q8BJ37 Gm25832-201ENSMUST00000104140 130 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 104.6 ms