Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm28110-201ENSMUST00000185782 315 ntBASIC1.51□□□□□ -2.17
Ccdc40Q8BI79 Gm29057-201ENSMUST00000186468 315 ntBASIC1.51□□□□□ -2.17
Ccdc40Q8BI79 Gm28737-201ENSMUST00000186808 315 ntBASIC1.51□□□□□ -2.17
Ccdc40Q8BI79 Gm29147-201ENSMUST00000186846 315 ntBASIC1.51□□□□□ -2.17
Ccdc40Q8BI79 Gm29118-201ENSMUST00000186908 315 ntBASIC1.51□□□□□ -2.17
Ccdc40Q8BI79 Gm28433-201ENSMUST00000187085 315 ntBASIC1.51□□□□□ -2.17
Ccdc40Q8BI79 Gm29227-201ENSMUST00000187139 315 ntBASIC1.51□□□□□ -2.17
Ccdc40Q8BI79 Gm28759-201ENSMUST00000187621 315 ntBASIC1.51□□□□□ -2.17
Ccdc40Q8BI79 Gm28831-201ENSMUST00000187739 315 ntBASIC1.51□□□□□ -2.17
Ccdc40Q8BI79 Gm28200-201ENSMUST00000187778 315 ntBASIC1.51□□□□□ -2.17
Ccdc40Q8BI79 Gm29034-201ENSMUST00000188099 315 ntBASIC1.51□□□□□ -2.17
Ccdc40Q8BI79 Gm28752-201ENSMUST00000188340 315 ntBASIC1.51□□□□□ -2.17
Ccdc40Q8BI79 Gm29378-201ENSMUST00000188723 315 ntBASIC1.51□□□□□ -2.17
Ccdc40Q8BI79 Gm28569-201ENSMUST00000188748 315 ntBASIC1.51□□□□□ -2.17
Ccdc40Q8BI79 Gm28120-201ENSMUST00000188812 315 ntBASIC1.51□□□□□ -2.17
Ccdc40Q8BI79 Gm28369-201ENSMUST00000188993 315 ntBASIC1.51□□□□□ -2.17
Ccdc40Q8BI79 Gm28537-201ENSMUST00000189026 315 ntBASIC1.51□□□□□ -2.17
Ccdc40Q8BI79 Gm28909-201ENSMUST00000189406 315 ntBASIC1.51□□□□□ -2.17
Ccdc40Q8BI79 Gm28861-201ENSMUST00000189681 315 ntBASIC1.51□□□□□ -2.17
Ccdc40Q8BI79 Gm28717-201ENSMUST00000189950 315 ntBASIC1.51□□□□□ -2.17
Ccdc40Q8BI79 Gm29180-201ENSMUST00000190003 315 ntBASIC1.51□□□□□ -2.17
Ccdc40Q8BI79 Gm29575-201ENSMUST00000190597 315 ntBASIC1.51□□□□□ -2.17
Ccdc40Q8BI79 Gm29631-201ENSMUST00000191065 315 ntBASIC1.51□□□□□ -2.17
Ccdc40Q8BI79 Gm28160-201ENSMUST00000191229 315 ntBASIC1.51□□□□□ -2.17
Ccdc40Q8BI79 Gm29469-201ENSMUST00000191448 315 ntBASIC1.51□□□□□ -2.17
Ccdc40Q8BI79 Gm37129-201ENSMUST00000195791 315 ntBASIC1.51□□□□□ -2.17
Ccdc40Q8BI79 Gm45116-201ENSMUST00000207392 275 ntBASIC1.51□□□□□ -2.17
Ccdc40Q8BI79 Gm23097-201ENSMUST00000083448 105 ntBASIC1.51□□□□□ -2.17
Ccdc40Q8BI79 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Ccdc40Q8BI79 Mir293-201ENSMUST00000104841 80 ntBASIC1.5□□□□□ -2.17
Ccdc40Q8BI79 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Ccdc40Q8BI79 Gm22073-201ENSMUST00000122668 189 ntBASIC1.5□□□□□ -2.17
Ccdc40Q8BI79 Gm17113-201ENSMUST00000170118 171 ntBASIC1.5□□□□□ -2.17
Ccdc40Q8BI79 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC1.5□□□□□ -2.17
Ccdc40Q8BI79 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC1.5□□□□□ -2.17
Ccdc40Q8BI79 Gm26265-202ENSMUST00000196326 133 ntBASIC1.5□□□□□ -2.17
Ccdc40Q8BI79 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.5□□□□□ -2.17
Ccdc40Q8BI79 Gm25207-201ENSMUST00000093745 107 ntBASIC1.5□□□□□ -2.17
Ccdc40Q8BI79 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Ccdc40Q8BI79 Snord98-201ENSMUST00000116819 65 ntBASIC1.49□□□□□ -2.17
Ccdc40Q8BI79 Gm11512-201ENSMUST00000119669 663 ntBASIC1.49□□□□□ -2.17
Ccdc40Q8BI79 Gm13588-201ENSMUST00000120026 135 ntBASIC1.49□□□□□ -2.17
Ccdc40Q8BI79 Gm13720-201ENSMUST00000120741 196 ntBASIC1.49□□□□□ -2.17
Ccdc40Q8BI79 Gm25052-201ENSMUST00000122661 158 ntBASIC1.49□□□□□ -2.17
Ccdc40Q8BI79 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Ccdc40Q8BI79 Gm26393-201ENSMUST00000157625 129 ntBASIC1.49□□□□□ -2.17
Ccdc40Q8BI79 Gm24005-201ENSMUST00000158459 296 ntBASIC1.49□□□□□ -2.17
Ccdc40Q8BI79 Gm24085-201ENSMUST00000175172 116 ntBASIC1.49□□□□□ -2.17
Ccdc40Q8BI79 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Ccdc40Q8BI79 AC116589.9-201ENSMUST00000221462 908 ntBASIC1.49□□□□□ -2.17
Ccdc40Q8BI79 Gm45557-201ENSMUST00000210004 1651 ntBASIC1.48□□□□□ -2.17
Ccdc40Q8BI79 Gm13729-201ENSMUST00000120328 406 ntBASIC1.48□□□□□ -2.17
Ccdc40Q8BI79 Gm23558-201ENSMUST00000157823 80 ntBASIC1.48□□□□□ -2.17
Ccdc40Q8BI79 Gm23221-201ENSMUST00000158118 93 ntBASIC1.48□□□□□ -2.17
Ccdc40Q8BI79 Gm24348-201ENSMUST00000158710 130 ntBASIC1.48□□□□□ -2.17
Ccdc40Q8BI79 Mir7062-201ENSMUST00000185038 66 ntBASIC1.48□□□□□ -2.17
Ccdc40Q8BI79 Gm29661-201ENSMUST00000186781 315 ntBASIC1.48□□□□□ -2.17
Ccdc40Q8BI79 Gm29308-201ENSMUST00000188863 315 ntBASIC1.48□□□□□ -2.17
Ccdc40Q8BI79 Gm29167-201ENSMUST00000190024 377 ntBASIC1.48□□□□□ -2.17
Ccdc40Q8BI79 Gm43723-201ENSMUST00000196886 189 ntBASIC1.48□□□□□ -2.17
Ccdc40Q8BI79 Gm35736-201ENSMUST00000203681 313 ntBASIC1.48□□□□□ -2.17
Ccdc40Q8BI79 AC164161.1-201ENSMUST00000214076 639 ntBASIC1.48□□□□□ -2.17
Ccdc40Q8BI79 Gm23245-201ENSMUST00000083370 135 ntBASIC1.48□□□□□ -2.17
Ccdc40Q8BI79 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.48□□□□□ -2.17
Ccdc40Q8BI79 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC1.48□□□□□ -2.17
Ccdc40Q8BI79 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.48□□□□□ -2.17
Ccdc40Q8BI79 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.48□□□□□ -2.17
Ccdc40Q8BI79 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Ccdc40Q8BI79 Gm14882-201ENSMUST00000117216 218 ntBASIC1.47□□□□□ -2.17
Ccdc40Q8BI79 Gm9059-201ENSMUST00000118319 183 ntBASIC1.47□□□□□ -2.17
Ccdc40Q8BI79 Gm11991-201ENSMUST00000119652 1074 ntBASIC1.47□□□□□ -2.17
Ccdc40Q8BI79 Gm27926-201ENSMUST00000157180 66 ntBASIC1.47□□□□□ -2.17
Ccdc40Q8BI79 Traj60-201ENSMUST00000167781 54 ntBASIC1.47□□□□□ -2.17
Ccdc40Q8BI79 Gm26430-201ENSMUST00000178054 107 ntBASIC1.47□□□□□ -2.17
Ccdc40Q8BI79 Gm21064-202ENSMUST00000190583 278 ntBASIC1.47□□□□□ -2.17
Ccdc40Q8BI79 Gm34139-201ENSMUST00000196166 294 ntBASIC1.47□□□□□ -2.17
Ccdc40Q8BI79 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.47□□□□□ -2.17
Ccdc40Q8BI79 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Ccdc40Q8BI79 Mir872-201ENSMUST00000104728 81 ntBASIC1.46□□□□□ -2.18
Ccdc40Q8BI79 Gm11857-201ENSMUST00000119817 324 ntBASIC1.46□□□□□ -2.18
Ccdc40Q8BI79 Gm15214-201ENSMUST00000122155 470 ntBASIC1.46□□□□□ -2.18
Ccdc40Q8BI79 Gm23535-201ENSMUST00000157542 106 ntBASIC1.46□□□□□ -2.18
Ccdc40Q8BI79 Gm24510-201ENSMUST00000174965 94 ntBASIC1.46□□□□□ -2.18
Ccdc40Q8BI79 Gm24366-201ENSMUST00000175383 86 ntBASIC1.46□□□□□ -2.18
Ccdc40Q8BI79 Mir7675-201ENSMUST00000184262 58 ntBASIC1.46□□□□□ -2.18
Ccdc40Q8BI79 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
Ccdc40Q8BI79 Igkv4-65-201ENSMUST00000196986 358 ntBASIC1.46□□□□□ -2.18
Ccdc40Q8BI79 Gm43427-201ENSMUST00000198188 331 ntBASIC1.46□□□□□ -2.18
Ccdc40Q8BI79 AC100209.2-201ENSMUST00000224461 451 ntBASIC1.46□□□□□ -2.18
Ccdc40Q8BI79 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Ccdc40Q8BI79 Gm24625-201ENSMUST00000082622 130 ntBASIC1.46□□□□□ -2.18
Ccdc40Q8BI79 Gm25958-201ENSMUST00000175114 71 ntBASIC1.45□□□□□ -2.18
Ccdc40Q8BI79 Gm37162-201ENSMUST00000191708 551 ntBASIC1.45□□□□□ -2.18
Ccdc40Q8BI79 Gm43993-201ENSMUST00000203972 247 ntBASIC1.45□□□□□ -2.18
Ccdc40Q8BI79 Gm45403-201ENSMUST00000209453 276 ntBASIC1.45□□□□□ -2.18
Ccdc40Q8BI79 Gm45815-201ENSMUST00000220241 146 ntBASIC1.45□□□□□ -2.18
Ccdc40Q8BI79 Gm23731-201ENSMUST00000083749 107 ntBASIC1.45□□□□□ -2.18
Ccdc40Q8BI79 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Ccdc40Q8BI79 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Ccdc40Q8BI79 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms