Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm28537-201ENSMUST00000189026 315 ntBASIC1.12□□□□□ -2.23
Clrn3Q8BHH8 Gm28909-201ENSMUST00000189406 315 ntBASIC1.12□□□□□ -2.23
Clrn3Q8BHH8 Gm28861-201ENSMUST00000189681 315 ntBASIC1.12□□□□□ -2.23
Clrn3Q8BHH8 Gm28717-201ENSMUST00000189950 315 ntBASIC1.12□□□□□ -2.23
Clrn3Q8BHH8 Gm29180-201ENSMUST00000190003 315 ntBASIC1.12□□□□□ -2.23
Clrn3Q8BHH8 Gm29575-201ENSMUST00000190597 315 ntBASIC1.12□□□□□ -2.23
Clrn3Q8BHH8 Gm29631-201ENSMUST00000191065 315 ntBASIC1.12□□□□□ -2.23
Clrn3Q8BHH8 Gm28160-201ENSMUST00000191229 315 ntBASIC1.12□□□□□ -2.23
Clrn3Q8BHH8 Gm29469-201ENSMUST00000191448 315 ntBASIC1.12□□□□□ -2.23
Clrn3Q8BHH8 Gm37129-201ENSMUST00000195791 315 ntBASIC1.12□□□□□ -2.23
Clrn3Q8BHH8 Gm23370-201ENSMUST00000199545 130 ntBASIC1.12□□□□□ -2.23
Clrn3Q8BHH8 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.12□□□□□ -2.23
Clrn3Q8BHH8 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.12□□□□□ -2.23
Clrn3Q8BHH8 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
Clrn3Q8BHH8 Gm26493-201ENSMUST00000083155 136 ntBASIC1.12□□□□□ -2.23
Clrn3Q8BHH8 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
Clrn3Q8BHH8 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
Clrn3Q8BHH8 Gm23336-201ENSMUST00000117023 123 ntBASIC1.11□□□□□ -2.23
Clrn3Q8BHH8 Gm13153-201ENSMUST00000120969 637 ntBASIC1.11□□□□□ -2.23
Clrn3Q8BHH8 Gm24510-201ENSMUST00000174965 94 ntBASIC1.11□□□□□ -2.23
Clrn3Q8BHH8 Gm18296-201ENSMUST00000192475 783 ntBASIC1.11□□□□□ -2.23
Clrn3Q8BHH8 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Clrn3Q8BHH8 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.11□□□□□ -2.23
Clrn3Q8BHH8 Gm25409-201ENSMUST00000083764 131 ntBASIC1.11□□□□□ -2.23
Clrn3Q8BHH8 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Clrn3Q8BHH8 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Clrn3Q8BHH8 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC1.1□□□□□ -2.23
Clrn3Q8BHH8 Gm26424-201ENSMUST00000122530 104 ntBASIC1.1□□□□□ -2.23
Clrn3Q8BHH8 Gm23083-201ENSMUST00000157851 116 ntBASIC1.1□□□□□ -2.23
Clrn3Q8BHH8 Gm22166-201ENSMUST00000178419 121 ntBASIC1.1□□□□□ -2.23
Clrn3Q8BHH8 Gm23288-201ENSMUST00000179213 121 ntBASIC1.1□□□□□ -2.23
Clrn3Q8BHH8 Gm28848-201ENSMUST00000189984 168 ntBASIC1.1□□□□□ -2.23
Clrn3Q8BHH8 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.1□□□□□ -2.23
Clrn3Q8BHH8 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC1.1□□□□□ -2.23
Clrn3Q8BHH8 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
Clrn3Q8BHH8 AC163357.1-201ENSMUST00000220847 233 ntBASIC1.1□□□□□ -2.23
Clrn3Q8BHH8 CT009718.4-201ENSMUST00000221881 109 ntBASIC1.1□□□□□ -2.23
Clrn3Q8BHH8 Gm25038-201ENSMUST00000082928 130 ntBASIC1.1□□□□□ -2.23
Clrn3Q8BHH8 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.09□□□□□ -2.23
Clrn3Q8BHH8 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
Clrn3Q8BHH8 Gm25543-201ENSMUST00000122678 312 ntBASIC1.09□□□□□ -2.23
Clrn3Q8BHH8 Gm24409-201ENSMUST00000157881 152 ntBASIC1.09□□□□□ -2.23
Clrn3Q8BHH8 Gm23411-201ENSMUST00000157988 62 ntBASIC1.09□□□□□ -2.23
Clrn3Q8BHH8 Gm26029-201ENSMUST00000158659 132 ntBASIC1.09□□□□□ -2.23
Clrn3Q8BHH8 Gm25069-201ENSMUST00000175238 86 ntBASIC1.09□□□□□ -2.23
Clrn3Q8BHH8 Mir3098-201ENSMUST00000175416 87 ntBASIC1.09□□□□□ -2.23
Clrn3Q8BHH8 Gm16399-201ENSMUST00000181423 219 ntBASIC1.09□□□□□ -2.23
Clrn3Q8BHH8 Gm29005-201ENSMUST00000186773 320 ntBASIC1.09□□□□□ -2.23
Clrn3Q8BHH8 Mir3087-201ENSMUST00000199405 56 ntBASIC1.09□□□□□ -2.23
Clrn3Q8BHH8 Gm35736-201ENSMUST00000203681 313 ntBASIC1.09□□□□□ -2.23
Clrn3Q8BHH8 AL772265.1-201ENSMUST00000214379 305 ntBASIC1.09□□□□□ -2.23
Clrn3Q8BHH8 AC192616.1-201ENSMUST00000221922 132 ntBASIC1.09□□□□□ -2.23
Clrn3Q8BHH8 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC1.09□□□□□ -2.23
Clrn3Q8BHH8 Snord96a-201ENSMUST00000082791 81 ntBASIC1.09□□□□□ -2.23
Clrn3Q8BHH8 Gm23448-201ENSMUST00000083151 104 ntBASIC1.09□□□□□ -2.23
Clrn3Q8BHH8 Mir211-201ENSMUST00000083651 106 ntBASIC1.09□□□□□ -2.23
Clrn3Q8BHH8 Gm24252-201ENSMUST00000083700 132 ntBASIC1.09□□□□□ -2.23
Clrn3Q8BHH8 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.09□□□□□ -2.24
Clrn3Q8BHH8 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Clrn3Q8BHH8 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.08□□□□□ -2.24
Clrn3Q8BHH8 Gm24191-201ENSMUST00000157977 122 ntBASIC1.08□□□□□ -2.24
Clrn3Q8BHH8 Gm24366-201ENSMUST00000175383 86 ntBASIC1.08□□□□□ -2.24
Clrn3Q8BHH8 Gm23419-201ENSMUST00000175523 84 ntBASIC1.08□□□□□ -2.24
Clrn3Q8BHH8 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC1.08□□□□□ -2.24
Clrn3Q8BHH8 Gm22129-201ENSMUST00000179034 107 ntBASIC1.08□□□□□ -2.24
Clrn3Q8BHH8 Gm28409-201ENSMUST00000187064 103 ntBASIC1.08□□□□□ -2.24
Clrn3Q8BHH8 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC1.08□□□□□ -2.24
Clrn3Q8BHH8 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC1.08□□□□□ -2.24
Clrn3Q8BHH8 Gm18360-201ENSMUST00000173327 1524 ntBASIC1.07□□□□□ -2.24
Clrn3Q8BHH8 Gm25377-201ENSMUST00000104334 129 ntBASIC1.07□□□□□ -2.24
Clrn3Q8BHH8 Gm11862-201ENSMUST00000119678 659 ntBASIC1.07□□□□□ -2.24
Clrn3Q8BHH8 Gm15529-201ENSMUST00000121833 994 ntBASIC1.07□□□□□ -2.24
Clrn3Q8BHH8 Gm24632-201ENSMUST00000122770 323 ntBASIC1.07□□□□□ -2.24
Clrn3Q8BHH8 Mir1967-201ENSMUST00000157789 82 ntBASIC1.07□□□□□ -2.24
Clrn3Q8BHH8 Gm26038-201ENSMUST00000158151 106 ntBASIC1.07□□□□□ -2.24
Clrn3Q8BHH8 Gm25163-201ENSMUST00000158905 104 ntBASIC1.07□□□□□ -2.24
Clrn3Q8BHH8 Mir7063-201ENSMUST00000184158 91 ntBASIC1.07□□□□□ -2.24
Clrn3Q8BHH8 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.07□□□□□ -2.24
Clrn3Q8BHH8 Gm26265-202ENSMUST00000196326 133 ntBASIC1.07□□□□□ -2.24
Clrn3Q8BHH8 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.07□□□□□ -2.24
Clrn3Q8BHH8 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC1.07□□□□□ -2.24
Clrn3Q8BHH8 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
Clrn3Q8BHH8 AC130821.1-201ENSMUST00000221997 293 ntBASIC1.07□□□□□ -2.24
Clrn3Q8BHH8 Gm46997-201ENSMUST00000222108 217 ntBASIC1.07□□□□□ -2.24
Clrn3Q8BHH8 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.07□□□□□ -2.24
Clrn3Q8BHH8 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.07□□□□□ -2.24
Clrn3Q8BHH8 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.07□□□□□ -2.24
Clrn3Q8BHH8 Gm22780-201ENSMUST00000104084 132 ntBASIC1.06□□□□□ -2.24
Clrn3Q8BHH8 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.06□□□□□ -2.24
Clrn3Q8BHH8 Gm23212-201ENSMUST00000122718 60 ntBASIC1.06□□□□□ -2.24
Clrn3Q8BHH8 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC1.06□□□□□ -2.24
Clrn3Q8BHH8 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
Clrn3Q8BHH8 Gm26435-201ENSMUST00000179026 107 ntBASIC1.06□□□□□ -2.24
Clrn3Q8BHH8 Gm5034-201ENSMUST00000199115 634 ntBASIC1.06□□□□□ -2.24
Clrn3Q8BHH8 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC1.06□□□□□ -2.24
Clrn3Q8BHH8 Gm45268-201ENSMUST00000210046 370 ntBASIC1.06□□□□□ -2.24
Clrn3Q8BHH8 Gm18696-201ENSMUST00000220103 274 ntBASIC1.06□□□□□ -2.24
Clrn3Q8BHH8 CT025538.2-201ENSMUST00000226083 772 ntBASIC1.06□□□□□ -2.24
Clrn3Q8BHH8 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
Clrn3Q8BHH8 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms