Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Gm24198-201ENSMUST00000157812 108 ntBASIC0.84□□□□□ -2.27
Rpap1Q80TE0 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC0.84□□□□□ -2.27
Rpap1Q80TE0 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC0.84□□□□□ -2.27
Rpap1Q80TE0 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC0.84□□□□□ -2.27
Rpap1Q80TE0 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
Rpap1Q80TE0 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC0.84□□□□□ -2.27
Rpap1Q80TE0 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC0.84□□□□□ -2.27
Rpap1Q80TE0 Gm22510-201ENSMUST00000179304 79 ntBASIC0.84□□□□□ -2.27
Rpap1Q80TE0 Gm26336-201ENSMUST00000179449 79 ntBASIC0.84□□□□□ -2.27
Rpap1Q80TE0 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC0.84□□□□□ -2.27
Rpap1Q80TE0 Gm26390-201ENSMUST00000179628 79 ntBASIC0.84□□□□□ -2.27
Rpap1Q80TE0 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC0.84□□□□□ -2.27
Rpap1Q80TE0 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC0.84□□□□□ -2.27
Rpap1Q80TE0 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC0.84□□□□□ -2.27
Rpap1Q80TE0 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
Rpap1Q80TE0 Gm27980-201ENSMUST00000184094 169 ntBASIC0.84□□□□□ -2.27
Rpap1Q80TE0 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC0.84□□□□□ -2.27
Rpap1Q80TE0 Gm28474-201ENSMUST00000188501 315 ntBASIC0.84□□□□□ -2.27
Rpap1Q80TE0 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
Rpap1Q80TE0 Gm38323-201ENSMUST00000192450 210 ntBASIC0.84□□□□□ -2.27
Rpap1Q80TE0 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC0.84□□□□□ -2.27
Rpap1Q80TE0 Trav5d-2-201ENSMUST00000196107 275 ntBASIC0.84□□□□□ -2.27
Rpap1Q80TE0 Trav5n-2-201ENSMUST00000197136 275 ntBASIC0.84□□□□□ -2.27
Rpap1Q80TE0 Gm43245-201ENSMUST00000197603 468 ntBASIC0.84□□□□□ -2.27
Rpap1Q80TE0 Gm44990-201ENSMUST00000203922 217 ntBASIC0.84□□□□□ -2.27
Rpap1Q80TE0 Gm44655-201ENSMUST00000207768 423 ntBASIC0.84□□□□□ -2.27
Rpap1Q80TE0 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC0.84□□□□□ -2.27
Rpap1Q80TE0 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC0.84□□□□□ -2.27
Rpap1Q80TE0 Gm26228-201ENSMUST00000082512 107 ntBASIC0.84□□□□□ -2.27
Rpap1Q80TE0 Gm22302-201ENSMUST00000082657 106 ntBASIC0.84□□□□□ -2.27
Rpap1Q80TE0 Snord32a-201ENSMUST00000083285 83 ntBASIC0.84□□□□□ -2.27
Rpap1Q80TE0 Gm25128-201ENSMUST00000083339 76 ntBASIC0.84□□□□□ -2.27
Rpap1Q80TE0 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.84□□□□□ -2.27
Rpap1Q80TE0 Gm25518-201ENSMUST00000083864 107 ntBASIC0.84□□□□□ -2.27
Rpap1Q80TE0 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC0.84□□□□□ -2.27
Rpap1Q80TE0 Gm23000-201ENSMUST00000157083 139 ntBASIC0.83□□□□□ -2.28
Rpap1Q80TE0 Gm23981-201ENSMUST00000157136 106 ntBASIC0.83□□□□□ -2.28
Rpap1Q80TE0 Gm24481-201ENSMUST00000157210 102 ntBASIC0.83□□□□□ -2.28
Rpap1Q80TE0 Gm23672-201ENSMUST00000157471 107 ntBASIC0.83□□□□□ -2.28
Rpap1Q80TE0 Gm23208-201ENSMUST00000158666 127 ntBASIC0.83□□□□□ -2.28
Rpap1Q80TE0 Mir7675-201ENSMUST00000184262 58 ntBASIC0.83□□□□□ -2.28
Rpap1Q80TE0 Gm42570-201ENSMUST00000195937 292 ntBASIC0.83□□□□□ -2.28
Rpap1Q80TE0 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC0.83□□□□□ -2.28
Rpap1Q80TE0 CT030166.3-201ENSMUST00000223203 193 ntBASIC0.83□□□□□ -2.28
Rpap1Q80TE0 CT025689.3-201ENSMUST00000223817 301 ntBASIC0.83□□□□□ -2.28
Rpap1Q80TE0 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
Rpap1Q80TE0 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
Rpap1Q80TE0 Gm22027-201ENSMUST00000122737 127 ntBASIC0.82□□□□□ -2.28
Rpap1Q80TE0 Gm23317-201ENSMUST00000157999 129 ntBASIC0.82□□□□□ -2.28
Rpap1Q80TE0 Gm26405-201ENSMUST00000158495 100 ntBASIC0.82□□□□□ -2.28
Rpap1Q80TE0 Gm23020-201ENSMUST00000158766 253 ntBASIC0.82□□□□□ -2.28
Rpap1Q80TE0 Igkv17-134-201ENSMUST00000168310 348 ntBASIC0.82□□□□□ -2.28
Rpap1Q80TE0 Gm24366-201ENSMUST00000175383 86 ntBASIC0.82□□□□□ -2.28
Rpap1Q80TE0 Gm27974-201ENSMUST00000183415 105 ntBASIC0.82□□□□□ -2.28
Rpap1Q80TE0 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC0.82□□□□□ -2.28
Rpap1Q80TE0 Gm28995-201ENSMUST00000186625 261 ntBASIC0.82□□□□□ -2.28
Rpap1Q80TE0 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC0.82□□□□□ -2.28
Rpap1Q80TE0 Gm29037-201ENSMUST00000189092 313 ntBASIC0.82□□□□□ -2.28
Rpap1Q80TE0 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC0.82□□□□□ -2.28
Rpap1Q80TE0 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC0.82□□□□□ -2.28
Rpap1Q80TE0 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC0.82□□□□□ -2.28
Rpap1Q80TE0 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC0.82□□□□□ -2.28
Rpap1Q80TE0 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
Rpap1Q80TE0 Mir340-201ENSMUST00000083483 98 ntBASIC0.82□□□□□ -2.28
Rpap1Q80TE0 Gm22577-201ENSMUST00000083731 109 ntBASIC0.82□□□□□ -2.28
Rpap1Q80TE0 Gm13804-201ENSMUST00000119552 172 ntBASIC0.81□□□□□ -2.28
Rpap1Q80TE0 Gm11991-201ENSMUST00000119652 1074 ntBASIC0.81□□□□□ -2.28
Rpap1Q80TE0 Gm23656-201ENSMUST00000122626 112 ntBASIC0.81□□□□□ -2.28
Rpap1Q80TE0 Gm25371-201ENSMUST00000158162 101 ntBASIC0.81□□□□□ -2.28
Rpap1Q80TE0 Gm3111-201ENSMUST00000167426 490 ntBASIC0.81□□□□□ -2.28
Rpap1Q80TE0 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC0.81□□□□□ -2.28
Rpap1Q80TE0 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC0.81□□□□□ -2.28
Rpap1Q80TE0 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC0.81□□□□□ -2.28
Rpap1Q80TE0 AC154424.1-201ENSMUST00000225883 799 ntBASIC0.81□□□□□ -2.28
Rpap1Q80TE0 n-R5s37-201ENSMUST00000082533 118 ntBASIC0.81□□□□□ -2.28
Rpap1Q80TE0 Gm25317-201ENSMUST00000116824 129 ntBASIC0.81□□□□□ -2.28
Rpap1Q80TE0 Gm14937-201ENSMUST00000119709 208 ntBASIC0.81□□□□□ -2.28
Rpap1Q80TE0 Gm14362-201ENSMUST00000121679 273 ntBASIC0.81□□□□□ -2.28
Rpap1Q80TE0 Gm14364-201ENSMUST00000129209 267 ntBASIC0.81□□□□□ -2.28
Rpap1Q80TE0 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC0.81□□□□□ -2.28
Rpap1Q80TE0 Gm15254-201ENSMUST00000149567 273 ntBASIC0.81□□□□□ -2.28
Rpap1Q80TE0 Gm22221-201ENSMUST00000157362 103 ntBASIC0.81□□□□□ -2.28
Rpap1Q80TE0 Rnu7-201ENSMUST00000158458 62 ntBASIC0.81□□□□□ -2.28
Rpap1Q80TE0 Gm26378-201ENSMUST00000179093 107 ntBASIC0.81□□□□□ -2.28
Rpap1Q80TE0 Gm24862-201ENSMUST00000179103 79 ntBASIC0.81□□□□□ -2.28
Rpap1Q80TE0 Gm23310-201ENSMUST00000179105 79 ntBASIC0.81□□□□□ -2.28
Rpap1Q80TE0 Gm25461-201ENSMUST00000179293 79 ntBASIC0.81□□□□□ -2.28
Rpap1Q80TE0 Mir7077-201ENSMUST00000183991 57 ntBASIC0.81□□□□□ -2.28
Rpap1Q80TE0 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC0.81□□□□□ -2.28
Rpap1Q80TE0 Gm29613-201ENSMUST00000185846 313 ntBASIC0.81□□□□□ -2.28
Rpap1Q80TE0 Gm29544-201ENSMUST00000188860 313 ntBASIC0.81□□□□□ -2.28
Rpap1Q80TE0 Gm28808-201ENSMUST00000190978 313 ntBASIC0.81□□□□□ -2.28
Rpap1Q80TE0 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC0.81□□□□□ -2.28
Rpap1Q80TE0 Gm23370-201ENSMUST00000199545 130 ntBASIC0.81□□□□□ -2.28
Rpap1Q80TE0 Gm29817-201ENSMUST00000210098 172 ntBASIC0.81□□□□□ -2.28
Rpap1Q80TE0 AC126691.1-201ENSMUST00000226534 202 ntBASIC0.81□□□□□ -2.28
Rpap1Q80TE0 Gm24977-201ENSMUST00000083106 163 ntBASIC0.81□□□□□ -2.28
Rpap1Q80TE0 Snora34-201ENSMUST00000083402 138 ntBASIC0.81□□□□□ -2.28
Rpap1Q80TE0 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
Rpap1Q80TE0 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 364.8 ms