Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC2.53□□□□□ -2
Ubfd1Q78JW9 Gm27753-201ENSMUST00000184742 203 ntBASIC2.53□□□□□ -2
Ubfd1Q78JW9 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.53□□□□□ -2
Ubfd1Q78JW9 AC173482.4-201ENSMUST00000225096 348 ntBASIC2.53□□□□□ -2
Ubfd1Q78JW9 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.53□□□□□ -2
Ubfd1Q78JW9 Gm24163-201ENSMUST00000093660 132 ntBASIC2.53□□□□□ -2
Ubfd1Q78JW9 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.53□□□□□ -2
Ubfd1Q78JW9 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC2.53□□□□□ -2
Ubfd1Q78JW9 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.52□□□□□ -2.01
Ubfd1Q78JW9 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Ubfd1Q78JW9 Gm22193-201ENSMUST00000116868 76 ntBASIC2.52□□□□□ -2.01
Ubfd1Q78JW9 Gm7209-201ENSMUST00000122339 333 ntBASIC2.52□□□□□ -2.01
Ubfd1Q78JW9 Gm23535-201ENSMUST00000157542 106 ntBASIC2.52□□□□□ -2.01
Ubfd1Q78JW9 Gm26411-201ENSMUST00000157668 107 ntBASIC2.52□□□□□ -2.01
Ubfd1Q78JW9 Gm25184-201ENSMUST00000157753 163 ntBASIC2.52□□□□□ -2.01
Ubfd1Q78JW9 Gm23640-201ENSMUST00000157860 104 ntBASIC2.52□□□□□ -2.01
Ubfd1Q78JW9 Gm23852-201ENSMUST00000158376 77 ntBASIC2.52□□□□□ -2.01
Ubfd1Q78JW9 Gm22118-201ENSMUST00000175593 171 ntBASIC2.52□□□□□ -2.01
Ubfd1Q78JW9 Mup-ps11-201ENSMUST00000178040 545 ntBASIC2.52□□□□□ -2.01
Ubfd1Q78JW9 Mup-ps3-201ENSMUST00000178315 545 ntBASIC2.52□□□□□ -2.01
Ubfd1Q78JW9 Gm25253-201ENSMUST00000179958 107 ntBASIC2.52□□□□□ -2.01
Ubfd1Q78JW9 Gm28627-201ENSMUST00000186141 453 ntBASIC2.52□□□□□ -2.01
Ubfd1Q78JW9 Mir1291-201ENSMUST00000199842 117 ntBASIC2.52□□□□□ -2.01
Ubfd1Q78JW9 Gm15235-201ENSMUST00000200572 194 ntBASIC2.52□□□□□ -2.01
Ubfd1Q78JW9 Gm44666-201ENSMUST00000208544 391 ntBASIC2.52□□□□□ -2.01
Ubfd1Q78JW9 AC159709.1-201ENSMUST00000220445 349 ntBASIC2.52□□□□□ -2.01
Ubfd1Q78JW9 AC165157.3-201ENSMUST00000220815 103 ntBASIC2.52□□□□□ -2.01
Ubfd1Q78JW9 AC173345.2-201ENSMUST00000222795 153 ntBASIC2.52□□□□□ -2.01
Ubfd1Q78JW9 AC183092.1-201ENSMUST00000224301 153 ntBASIC2.52□□□□□ -2.01
Ubfd1Q78JW9 AC167140.1-201ENSMUST00000224710 403 ntBASIC2.52□□□□□ -2.01
Ubfd1Q78JW9 Gm24355-201ENSMUST00000082858 122 ntBASIC2.52□□□□□ -2.01
Ubfd1Q78JW9 Gm22358-201ENSMUST00000082877 122 ntBASIC2.52□□□□□ -2.01
Ubfd1Q78JW9 Gm26494-201ENSMUST00000083154 143 ntBASIC2.52□□□□□ -2.01
Ubfd1Q78JW9 Snora34-201ENSMUST00000083402 138 ntBASIC2.52□□□□□ -2.01
Ubfd1Q78JW9 Gm24493-201ENSMUST00000083805 143 ntBASIC2.52□□□□□ -2.01
Ubfd1Q78JW9 Gm25188-201ENSMUST00000083913 122 ntBASIC2.52□□□□□ -2.01
Ubfd1Q78JW9 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Ubfd1Q78JW9 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Ubfd1Q78JW9 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Ubfd1Q78JW9 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.51□□□□□ -2.01
Ubfd1Q78JW9 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.51□□□□□ -2.01
Ubfd1Q78JW9 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC2.51□□□□□ -2.01
Ubfd1Q78JW9 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC2.51□□□□□ -2.01
Ubfd1Q78JW9 Gm22321-201ENSMUST00000157152 104 ntBASIC2.51□□□□□ -2.01
Ubfd1Q78JW9 Gm22651-201ENSMUST00000157872 94 ntBASIC2.51□□□□□ -2.01
Ubfd1Q78JW9 Gm24053-201ENSMUST00000158620 105 ntBASIC2.51□□□□□ -2.01
Ubfd1Q78JW9 Gm23047-201ENSMUST00000177661 94 ntBASIC2.51□□□□□ -2.01
Ubfd1Q78JW9 Gm28921-201ENSMUST00000190219 378 ntBASIC2.51□□□□□ -2.01
Ubfd1Q78JW9 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.51□□□□□ -2.01
Ubfd1Q78JW9 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.5□□□□□ -2.01
Ubfd1Q78JW9 Gm24670-201ENSMUST00000104154 132 ntBASIC2.5□□□□□ -2.01
Ubfd1Q78JW9 Gm23982-201ENSMUST00000157141 106 ntBASIC2.5□□□□□ -2.01
Ubfd1Q78JW9 Mir6386-201ENSMUST00000183558 104 ntBASIC2.5□□□□□ -2.01
Ubfd1Q78JW9 Gm45543-201ENSMUST00000209327 88 ntBASIC2.5□□□□□ -2.01
Ubfd1Q78JW9 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC2.5□□□□□ -2.01
Ubfd1Q78JW9 Gm9174-201ENSMUST00000078149 255 ntBASIC2.5□□□□□ -2.01
Ubfd1Q78JW9 Gm22299-201ENSMUST00000082663 136 ntBASIC2.5□□□□□ -2.01
Ubfd1Q78JW9 Rny1-201ENSMUST00000083767 112 ntBASIC2.5□□□□□ -2.01
Ubfd1Q78JW9 Gm23847-201ENSMUST00000083829 110 ntBASIC2.5□□□□□ -2.01
Ubfd1Q78JW9 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
Ubfd1Q78JW9 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Ubfd1Q78JW9 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.5□□□□□ -2.01
Ubfd1Q78JW9 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.49□□□□□ -2.01
Ubfd1Q78JW9 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
Ubfd1Q78JW9 Gm23803-201ENSMUST00000104610 132 ntBASIC2.49□□□□□ -2.01
Ubfd1Q78JW9 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Ubfd1Q78JW9 Gm27793-201ENSMUST00000183405 76 ntBASIC2.49□□□□□ -2.01
Ubfd1Q78JW9 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.49□□□□□ -2.01
Ubfd1Q78JW9 Gm44482-201ENSMUST00000199232 103 ntBASIC2.49□□□□□ -2.01
Ubfd1Q78JW9 Gm45365-201ENSMUST00000209489 256 ntBASIC2.49□□□□□ -2.01
Ubfd1Q78JW9 AL929417.1-201ENSMUST00000214901 124 ntBASIC2.49□□□□□ -2.01
Ubfd1Q78JW9 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC2.49□□□□□ -2.01
Ubfd1Q78JW9 AC166830.2-201ENSMUST00000225821 196 ntBASIC2.49□□□□□ -2.01
Ubfd1Q78JW9 Gm5899-201ENSMUST00000071770 270 ntBASIC2.49□□□□□ -2.01
Ubfd1Q78JW9 Gm25789-201ENSMUST00000083294 76 ntBASIC2.49□□□□□ -2.01
Ubfd1Q78JW9 Gm24164-201ENSMUST00000093663 104 ntBASIC2.49□□□□□ -2.01
Ubfd1Q78JW9 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Ubfd1Q78JW9 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Ubfd1Q78JW9 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Ubfd1Q78JW9 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Ubfd1Q78JW9 Gm22750-201ENSMUST00000102076 103 ntBASIC2.48□□□□□ -2.01
Ubfd1Q78JW9 Mir542-201ENSMUST00000102186 85 ntBASIC2.48□□□□□ -2.01
Ubfd1Q78JW9 Mir466b-8-201ENSMUST00000103883 86 ntBASIC2.48□□□□□ -2.01
Ubfd1Q78JW9 Gm26341-201ENSMUST00000104561 134 ntBASIC2.48□□□□□ -2.01
Ubfd1Q78JW9 Mir1936-201ENSMUST00000158699 93 ntBASIC2.48□□□□□ -2.01
Ubfd1Q78JW9 Mir3075-201ENSMUST00000175340 85 ntBASIC2.48□□□□□ -2.01
Ubfd1Q78JW9 Gm27991-201ENSMUST00000184804 137 ntBASIC2.48□□□□□ -2.01
Ubfd1Q78JW9 Gm19257-201ENSMUST00000186121 183 ntBASIC2.48□□□□□ -2.01
Ubfd1Q78JW9 Gm2719-201ENSMUST00000191929 444 ntBASIC2.48□□□□□ -2.01
Ubfd1Q78JW9 Gm37089-201ENSMUST00000195616 129 ntBASIC2.48□□□□□ -2.01
Ubfd1Q78JW9 Mir466e-201ENSMUST00000198862 84 ntBASIC2.48□□□□□ -2.01
Ubfd1Q78JW9 Gm43220-201ENSMUST00000199299 282 ntBASIC2.48□□□□□ -2.01
Ubfd1Q78JW9 Mir7215-201ENSMUST00000200383 51 ntBASIC2.48□□□□□ -2.01
Ubfd1Q78JW9 Mir466c-1-201ENSMUST00000200654 84 ntBASIC2.48□□□□□ -2.01
Ubfd1Q78JW9 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC2.48□□□□□ -2.01
Ubfd1Q78JW9 Gm6796-201ENSMUST00000211919 243 ntBASIC2.48□□□□□ -2.01
Ubfd1Q78JW9 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Ubfd1Q78JW9 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Ubfd1Q78JW9 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Ubfd1Q78JW9 Gm26473-201ENSMUST00000116763 127 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 137.1 ms