Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.45□□□□□ -2.02
Smarca1Q6PGB8 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Smarca1Q6PGB8 CT030170.3-201ENSMUST00000221205 1815 ntBASIC2.45□□□□□ -2.02
Smarca1Q6PGB8 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Smarca1Q6PGB8 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Smarca1Q6PGB8 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC2.45□□□□□ -2.02
Smarca1Q6PGB8 Gm14761-201ENSMUST00000121363 262 ntBASIC2.45□□□□□ -2.02
Smarca1Q6PGB8 Gm24837-201ENSMUST00000158683 81 ntBASIC2.45□□□□□ -2.02
Smarca1Q6PGB8 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC2.45□□□□□ -2.02
Smarca1Q6PGB8 Gm23355-201ENSMUST00000177614 107 ntBASIC2.45□□□□□ -2.02
Smarca1Q6PGB8 Gm23148-201ENSMUST00000180367 107 ntBASIC2.45□□□□□ -2.02
Smarca1Q6PGB8 Mir1291-201ENSMUST00000199842 117 ntBASIC2.45□□□□□ -2.02
Smarca1Q6PGB8 Gm45445-201ENSMUST00000209586 232 ntBASIC2.45□□□□□ -2.02
Smarca1Q6PGB8 Gm25258-201ENSMUST00000083049 107 ntBASIC2.45□□□□□ -2.02
Smarca1Q6PGB8 Gm24977-201ENSMUST00000083106 163 ntBASIC2.45□□□□□ -2.02
Smarca1Q6PGB8 Snora34-201ENSMUST00000083402 138 ntBASIC2.45□□□□□ -2.02
Smarca1Q6PGB8 Mir93-201ENSMUST00000083593 88 ntBASIC2.45□□□□□ -2.02
Smarca1Q6PGB8 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.45□□□□□ -2.02
Smarca1Q6PGB8 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Smarca1Q6PGB8 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Smarca1Q6PGB8 Gm15526-201ENSMUST00000112504 204 ntBASIC2.44□□□□□ -2.02
Smarca1Q6PGB8 Gm15215-201ENSMUST00000117773 489 ntBASIC2.44□□□□□ -2.02
Smarca1Q6PGB8 Gm6829-201ENSMUST00000119858 360 ntBASIC2.44□□□□□ -2.02
Smarca1Q6PGB8 Gm12721-201ENSMUST00000120621 268 ntBASIC2.44□□□□□ -2.02
Smarca1Q6PGB8 Gm25115-201ENSMUST00000157187 140 ntBASIC2.44□□□□□ -2.02
Smarca1Q6PGB8 Gm44473-201ENSMUST00000204039 152 ntBASIC2.44□□□□□ -2.02
Smarca1Q6PGB8 Gm7214-201ENSMUST00000222428 272 ntBASIC2.44□□□□□ -2.02
Smarca1Q6PGB8 Snord104-201ENSMUST00000083192 70 ntBASIC2.44□□□□□ -2.02
Smarca1Q6PGB8 Gm25793-201ENSMUST00000083287 107 ntBASIC2.44□□□□□ -2.02
Smarca1Q6PGB8 Gm4746-201ENSMUST00000120395 2406 ntBASIC2.44□□□□□ -2.02
Smarca1Q6PGB8 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Smarca1Q6PGB8 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Smarca1Q6PGB8 Gm22193-201ENSMUST00000116868 76 ntBASIC2.43□□□□□ -2.02
Smarca1Q6PGB8 Mir1b-201ENSMUST00000117012 122 ntBASIC2.43□□□□□ -2.02
Smarca1Q6PGB8 Gm14782-201ENSMUST00000120151 195 ntBASIC2.43□□□□□ -2.02
Smarca1Q6PGB8 Gm11786-201ENSMUST00000120799 155 ntBASIC2.43□□□□□ -2.02
Smarca1Q6PGB8 Gm25805-201ENSMUST00000122788 108 ntBASIC2.43□□□□□ -2.02
Smarca1Q6PGB8 Gm23759-201ENSMUST00000158351 268 ntBASIC2.43□□□□□ -2.02
Smarca1Q6PGB8 Gm23858-201ENSMUST00000158384 106 ntBASIC2.43□□□□□ -2.02
Smarca1Q6PGB8 Gm22242-201ENSMUST00000175224 118 ntBASIC2.43□□□□□ -2.02
Smarca1Q6PGB8 Gm28579-201ENSMUST00000186143 369 ntBASIC2.43□□□□□ -2.02
Smarca1Q6PGB8 Gm42672-201ENSMUST00000197821 352 ntBASIC2.43□□□□□ -2.02
Smarca1Q6PGB8 Gm22972-201ENSMUST00000083297 131 ntBASIC2.43□□□□□ -2.02
Smarca1Q6PGB8 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Smarca1Q6PGB8 AC160115.1-201ENSMUST00000224678 1574 ntBASIC2.43□□□□□ -2.02
Smarca1Q6PGB8 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
Smarca1Q6PGB8 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Smarca1Q6PGB8 Gm12235-201ENSMUST00000118596 170 ntBASIC2.42□□□□□ -2.02
Smarca1Q6PGB8 Gm22114-201ENSMUST00000177756 107 ntBASIC2.42□□□□□ -2.02
Smarca1Q6PGB8 Mir6406-201ENSMUST00000183592 120 ntBASIC2.42□□□□□ -2.02
Smarca1Q6PGB8 Mir3569-201ENSMUST00000185080 58 ntBASIC2.42□□□□□ -2.02
Smarca1Q6PGB8 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC2.42□□□□□ -2.02
Smarca1Q6PGB8 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.42□□□□□ -2.02
Smarca1Q6PGB8 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Smarca1Q6PGB8 Gm12941-201ENSMUST00000117934 220 ntBASIC2.41□□□□□ -2.02
Smarca1Q6PGB8 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.41□□□□□ -2.02
Smarca1Q6PGB8 Gm13992-201ENSMUST00000120558 156 ntBASIC2.41□□□□□ -2.02
Smarca1Q6PGB8 Gm23048-201ENSMUST00000157237 129 ntBASIC2.41□□□□□ -2.02
Smarca1Q6PGB8 Gm23230-201ENSMUST00000157298 133 ntBASIC2.41□□□□□ -2.02
Smarca1Q6PGB8 Mir5624-201ENSMUST00000176635 61 ntBASIC2.41□□□□□ -2.02
Smarca1Q6PGB8 Gm27271-201ENSMUST00000183509 170 ntBASIC2.41□□□□□ -2.02
Smarca1Q6PGB8 Gm19777-201ENSMUST00000191940 358 ntBASIC2.41□□□□□ -2.02
Smarca1Q6PGB8 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.41□□□□□ -2.02
Smarca1Q6PGB8 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.41□□□□□ -2.02
Smarca1Q6PGB8 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.41□□□□□ -2.02
Smarca1Q6PGB8 Snora69-201ENSMUST00000083708 131 ntBASIC2.41□□□□□ -2.02
Smarca1Q6PGB8 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.41□□□□□ -2.02
Smarca1Q6PGB8 Gm23950-201ENSMUST00000104026 129 ntBASIC2.4□□□□□ -2.03
Smarca1Q6PGB8 Gm25421-201ENSMUST00000104218 164 ntBASIC2.4□□□□□ -2.03
Smarca1Q6PGB8 Gm24630-201ENSMUST00000122768 106 ntBASIC2.4□□□□□ -2.03
Smarca1Q6PGB8 Gm24010-201ENSMUST00000157731 282 ntBASIC2.4□□□□□ -2.03
Smarca1Q6PGB8 Gm22803-201ENSMUST00000158049 283 ntBASIC2.4□□□□□ -2.03
Smarca1Q6PGB8 Gm26157-201ENSMUST00000158974 126 ntBASIC2.4□□□□□ -2.03
Smarca1Q6PGB8 Gm29512-201ENSMUST00000185544 315 ntBASIC2.4□□□□□ -2.03
Smarca1Q6PGB8 Gm28110-201ENSMUST00000185782 315 ntBASIC2.4□□□□□ -2.03
Smarca1Q6PGB8 Gm29057-201ENSMUST00000186468 315 ntBASIC2.4□□□□□ -2.03
Smarca1Q6PGB8 Gm29661-201ENSMUST00000186781 315 ntBASIC2.4□□□□□ -2.03
Smarca1Q6PGB8 Gm28737-201ENSMUST00000186808 315 ntBASIC2.4□□□□□ -2.03
Smarca1Q6PGB8 Gm29118-201ENSMUST00000186908 315 ntBASIC2.4□□□□□ -2.03
Smarca1Q6PGB8 Gm28433-201ENSMUST00000187085 315 ntBASIC2.4□□□□□ -2.03
Smarca1Q6PGB8 Gm28759-201ENSMUST00000187621 315 ntBASIC2.4□□□□□ -2.03
Smarca1Q6PGB8 Gm28831-201ENSMUST00000187739 315 ntBASIC2.4□□□□□ -2.03
Smarca1Q6PGB8 Gm28200-201ENSMUST00000187778 315 ntBASIC2.4□□□□□ -2.03
Smarca1Q6PGB8 Gm28752-201ENSMUST00000188340 315 ntBASIC2.4□□□□□ -2.03
Smarca1Q6PGB8 Gm29378-201ENSMUST00000188723 315 ntBASIC2.4□□□□□ -2.03
Smarca1Q6PGB8 Gm28569-201ENSMUST00000188748 315 ntBASIC2.4□□□□□ -2.03
Smarca1Q6PGB8 Gm28120-201ENSMUST00000188812 315 ntBASIC2.4□□□□□ -2.03
Smarca1Q6PGB8 Gm28369-201ENSMUST00000188993 315 ntBASIC2.4□□□□□ -2.03
Smarca1Q6PGB8 Gm29037-201ENSMUST00000189092 313 ntBASIC2.4□□□□□ -2.03
Smarca1Q6PGB8 Gm28909-201ENSMUST00000189406 315 ntBASIC2.4□□□□□ -2.03
Smarca1Q6PGB8 Gm28861-201ENSMUST00000189681 315 ntBASIC2.4□□□□□ -2.03
Smarca1Q6PGB8 Gm29180-201ENSMUST00000190003 315 ntBASIC2.4□□□□□ -2.03
Smarca1Q6PGB8 Gm29575-201ENSMUST00000190597 315 ntBASIC2.4□□□□□ -2.03
Smarca1Q6PGB8 Gm29469-201ENSMUST00000191448 315 ntBASIC2.4□□□□□ -2.03
Smarca1Q6PGB8 Gm37557-201ENSMUST00000191640 139 ntBASIC2.4□□□□□ -2.03
Smarca1Q6PGB8 Mir181a-2-201ENSMUST00000083489 76 ntBASIC2.4□□□□□ -2.03
Smarca1Q6PGB8 Mir222-201ENSMUST00000083537 79 ntBASIC2.4□□□□□ -2.03
Smarca1Q6PGB8 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Smarca1Q6PGB8 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.4□□□□□ -2.03
Smarca1Q6PGB8 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 138.5 ms