Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm22403-201ENSMUST00000174919 84 ntBASIC0.31□□□□□ -2.36
Nup98Q6PFD9 Mir5104-201ENSMUST00000175319 94 ntBASIC0.31□□□□□ -2.36
Nup98Q6PFD9 Gm27676-201ENSMUST00000183669 61 ntBASIC0.31□□□□□ -2.36
Nup98Q6PFD9 Gm37869-201ENSMUST00000193385 595 ntBASIC0.31□□□□□ -2.36
Nup98Q6PFD9 Gm43914-201ENSMUST00000203592 594 ntBASIC0.31□□□□□ -2.36
Nup98Q6PFD9 AC113305.1-201ENSMUST00000214664 724 ntBASIC0.31□□□□□ -2.36
Nup98Q6PFD9 Gm2020-201ENSMUST00000145242 579 ntBASIC0.3□□□□□ -2.36
Nup98Q6PFD9 Gm25663-201ENSMUST00000157698 135 ntBASIC0.3□□□□□ -2.36
Nup98Q6PFD9 Gm23114-201ENSMUST00000158478 117 ntBASIC0.3□□□□□ -2.36
Nup98Q6PFD9 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.3□□□□□ -2.36
Nup98Q6PFD9 Gm16404-201ENSMUST00000177739 468 ntBASIC0.3□□□□□ -2.36
Nup98Q6PFD9 Gm7958-201ENSMUST00000178255 468 ntBASIC0.3□□□□□ -2.36
Nup98Q6PFD9 Gm24390-201ENSMUST00000179578 62 ntBASIC0.3□□□□□ -2.36
Nup98Q6PFD9 Gm7950-201ENSMUST00000179633 468 ntBASIC0.3□□□□□ -2.36
Nup98Q6PFD9 Gm14598-201ENSMUST00000180109 468 ntBASIC0.3□□□□□ -2.36
Nup98Q6PFD9 Gm14625-201ENSMUST00000180231 468 ntBASIC0.3□□□□□ -2.36
Nup98Q6PFD9 Gm26914-201ENSMUST00000182262 223 ntBASIC0.3□□□□□ -2.36
Nup98Q6PFD9 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC0.3□□□□□ -2.36
Nup98Q6PFD9 Gm43035-201ENSMUST00000197626 517 ntBASIC0.3□□□□□ -2.36
Nup98Q6PFD9 Gm42976-201ENSMUST00000200313 222 ntBASIC0.3□□□□□ -2.36
Nup98Q6PFD9 Gm44211-201ENSMUST00000204867 145 ntBASIC0.3□□□□□ -2.36
Nup98Q6PFD9 Gm7495-201ENSMUST00000215099 426 ntBASIC0.3□□□□□ -2.36
Nup98Q6PFD9 AC154692.1-201ENSMUST00000228314 544 ntBASIC0.3□□□□□ -2.36
Nup98Q6PFD9 AC124426.1-203ENSMUST00000221814 1362 ntBASIC0.3□□□□□ -2.36
Nup98Q6PFD9 Gm25378-201ENSMUST00000104333 129 ntBASIC0.29□□□□□ -2.36
Nup98Q6PFD9 Mir883a-201ENSMUST00000104824 76 ntBASIC0.29□□□□□ -2.36
Nup98Q6PFD9 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.29□□□□□ -2.36
Nup98Q6PFD9 Mir3061-201ENSMUST00000175129 91 ntBASIC0.29□□□□□ -2.36
Nup98Q6PFD9 Gm27942-201ENSMUST00000184669 101 ntBASIC0.29□□□□□ -2.36
Nup98Q6PFD9 Gm44125-201ENSMUST00000203068 448 ntBASIC0.29□□□□□ -2.36
Nup98Q6PFD9 Gm17911-201ENSMUST00000210806 877 ntBASIC0.29□□□□□ -2.36
Nup98Q6PFD9 AC124772.1-201ENSMUST00000221325 151 ntBASIC0.29□□□□□ -2.36
Nup98Q6PFD9 Gm16412-201ENSMUST00000121602 273 ntBASIC0.29□□□□□ -2.36
Nup98Q6PFD9 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
Nup98Q6PFD9 Gm27428-201ENSMUST00000184289 110 ntBASIC0.29□□□□□ -2.36
Nup98Q6PFD9 Gm37713-201ENSMUST00000191746 198 ntBASIC0.29□□□□□ -2.36
Nup98Q6PFD9 Gm37693-201ENSMUST00000194562 234 ntBASIC0.29□□□□□ -2.36
Nup98Q6PFD9 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC0.29□□□□□ -2.36
Nup98Q6PFD9 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC0.29□□□□□ -2.36
Nup98Q6PFD9 AC173482.4-201ENSMUST00000225096 348 ntBASIC0.29□□□□□ -2.36
Nup98Q6PFD9 AC122341.1-201ENSMUST00000227291 560 ntBASIC0.29□□□□□ -2.36
Nup98Q6PFD9 Gm12080-201ENSMUST00000119821 1883 ntBASIC0.29□□□□□ -2.36
Nup98Q6PFD9 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC0.28□□□□□ -2.36
Nup98Q6PFD9 Gm23754-201ENSMUST00000157576 63 ntBASIC0.28□□□□□ -2.36
Nup98Q6PFD9 Gm23068-201ENSMUST00000158239 293 ntBASIC0.28□□□□□ -2.36
Nup98Q6PFD9 Gm25949-201ENSMUST00000175333 114 ntBASIC0.28□□□□□ -2.36
Nup98Q6PFD9 Gm27545-201ENSMUST00000184755 202 ntBASIC0.28□□□□□ -2.36
Nup98Q6PFD9 Gm29661-201ENSMUST00000186781 315 ntBASIC0.28□□□□□ -2.36
Nup98Q6PFD9 Gm29308-201ENSMUST00000188863 315 ntBASIC0.28□□□□□ -2.36
Nup98Q6PFD9 Gm42570-201ENSMUST00000195937 292 ntBASIC0.28□□□□□ -2.36
Nup98Q6PFD9 Gm25589-201ENSMUST00000082502 166 ntBASIC0.28□□□□□ -2.36
Nup98Q6PFD9 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.28□□□□□ -2.37
Nup98Q6PFD9 Gm15175-201ENSMUST00000117629 132 ntBASIC0.27□□□□□ -2.37
Nup98Q6PFD9 Gm8858-201ENSMUST00000118259 342 ntBASIC0.27□□□□□ -2.37
Nup98Q6PFD9 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC0.27□□□□□ -2.37
Nup98Q6PFD9 Gm23106-201ENSMUST00000157554 101 ntBASIC0.27□□□□□ -2.37
Nup98Q6PFD9 Gm17052-201ENSMUST00000165496 289 ntBASIC0.27□□□□□ -2.37
Nup98Q6PFD9 Gm24080-201ENSMUST00000175178 232 ntBASIC0.27□□□□□ -2.37
Nup98Q6PFD9 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC0.27□□□□□ -2.37
Nup98Q6PFD9 Trbv24-201ENSMUST00000194614 347 ntBASIC0.27□□□□□ -2.37
Nup98Q6PFD9 Gm43602-201ENSMUST00000196772 300 ntBASIC0.27□□□□□ -2.37
Nup98Q6PFD9 Gm38395-201ENSMUST00000199904 830 ntBASIC0.27□□□□□ -2.37
Nup98Q6PFD9 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC0.27□□□□□ -2.37
Nup98Q6PFD9 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
Nup98Q6PFD9 Snord33-201ENSMUST00000083694 84 ntBASIC0.27□□□□□ -2.37
Nup98Q6PFD9 Mir452-201ENSMUST00000093629 85 ntBASIC0.27□□□□□ -2.37
Nup98Q6PFD9 AC161250.2-201ENSMUST00000215114 3107 ntBASIC0.27□□□□□ -2.37
Nup98Q6PFD9 Gm12102-201ENSMUST00000118251 604 ntBASIC0.27□□□□□ -2.37
Nup98Q6PFD9 Gm15266-201ENSMUST00000119635 255 ntBASIC0.27□□□□□ -2.37
Nup98Q6PFD9 Gm13246-201ENSMUST00000120994 315 ntBASIC0.27□□□□□ -2.37
Nup98Q6PFD9 Gm2768-201ENSMUST00000121062 250 ntBASIC0.27□□□□□ -2.37
Nup98Q6PFD9 Gm22477-201ENSMUST00000122569 316 ntBASIC0.27□□□□□ -2.37
Nup98Q6PFD9 Gm22962-201ENSMUST00000157962 73 ntBASIC0.27□□□□□ -2.37
Nup98Q6PFD9 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC0.27□□□□□ -2.37
Nup98Q6PFD9 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC0.27□□□□□ -2.37
Nup98Q6PFD9 Gm25194-201ENSMUST00000177987 79 ntBASIC0.27□□□□□ -2.37
Nup98Q6PFD9 Gm27013-201ENSMUST00000182441 1024 ntBASIC0.27□□□□□ -2.37
Nup98Q6PFD9 Mir293-201ENSMUST00000104841 80 ntBASIC0.26□□□□□ -2.37
Nup98Q6PFD9 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC0.26□□□□□ -2.37
Nup98Q6PFD9 Gm27715-201ENSMUST00000184714 260 ntBASIC0.26□□□□□ -2.37
Nup98Q6PFD9 Igkv13-82-201ENSMUST00000200308 346 ntBASIC0.26□□□□□ -2.37
Nup98Q6PFD9 Gm19032-201ENSMUST00000208584 592 ntBASIC0.26□□□□□ -2.37
Nup98Q6PFD9 Gm24311-201ENSMUST00000082570 104 ntBASIC0.26□□□□□ -2.37
Nup98Q6PFD9 Mir32-201ENSMUST00000083610 70 ntBASIC0.26□□□□□ -2.37
Nup98Q6PFD9 Gm25650-201ENSMUST00000083784 162 ntBASIC0.26□□□□□ -2.37
Nup98Q6PFD9 Gm25981-201ENSMUST00000157921 295 ntBASIC0.25□□□□□ -2.37
Nup98Q6PFD9 Gm22765-201ENSMUST00000158371 128 ntBASIC0.25□□□□□ -2.37
Nup98Q6PFD9 Mir3964-201ENSMUST00000174898 74 ntBASIC0.25□□□□□ -2.37
Nup98Q6PFD9 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.25□□□□□ -2.37
Nup98Q6PFD9 Ighv1-32-201ENSMUST00000195149 351 ntBASIC0.25□□□□□ -2.37
Nup98Q6PFD9 Gm34073-201ENSMUST00000195736 212 ntBASIC0.25□□□□□ -2.37
Nup98Q6PFD9 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC0.25□□□□□ -2.37
Nup98Q6PFD9 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.25□□□□□ -2.37
Nup98Q6PFD9 Gm25851-201ENSMUST00000082794 107 ntBASIC0.25□□□□□ -2.37
Nup98Q6PFD9 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC0.25□□□□□ -2.37
Nup98Q6PFD9 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC0.25□□□□□ -2.37
Nup98Q6PFD9 Gm25108-201ENSMUST00000122473 78 ntBASIC0.24□□□□□ -2.37
Nup98Q6PFD9 Gm24784-201ENSMUST00000157640 62 ntBASIC0.24□□□□□ -2.37
Nup98Q6PFD9 Gm15914-201ENSMUST00000161922 309 ntBASIC0.24□□□□□ -2.37
Nup98Q6PFD9 Gm23648-201ENSMUST00000180301 107 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms