Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Gm24480-201ENSMUST00000157442 103 ntBASIC1.99□□□□□ -2.09
Herc4Q6PAV2 Gm24770-201ENSMUST00000158505 92 ntBASIC1.99□□□□□ -2.09
Herc4Q6PAV2 Gm25836-201ENSMUST00000158918 123 ntBASIC1.99□□□□□ -2.09
Herc4Q6PAV2 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.99□□□□□ -2.09
Herc4Q6PAV2 Gm22242-201ENSMUST00000175224 118 ntBASIC1.99□□□□□ -2.09
Herc4Q6PAV2 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.99□□□□□ -2.09
Herc4Q6PAV2 Gm23289-201ENSMUST00000175615 108 ntBASIC1.99□□□□□ -2.09
Herc4Q6PAV2 Gm24656-201ENSMUST00000177548 132 ntBASIC1.99□□□□□ -2.09
Herc4Q6PAV2 Gm21885-201ENSMUST00000178891 327 ntBASIC1.99□□□□□ -2.09
Herc4Q6PAV2 Gm27640-201ENSMUST00000184580 147 ntBASIC1.99□□□□□ -2.09
Herc4Q6PAV2 Gm37404-201ENSMUST00000195726 359 ntBASIC1.99□□□□□ -2.09
Herc4Q6PAV2 Gm43427-201ENSMUST00000198188 331 ntBASIC1.99□□□□□ -2.09
Herc4Q6PAV2 Gm45296-201ENSMUST00000209625 205 ntBASIC1.99□□□□□ -2.09
Herc4Q6PAV2 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC1.99□□□□□ -2.09
Herc4Q6PAV2 Gm26922-201ENSMUST00000082687 72 ntBASIC1.99□□□□□ -2.09
Herc4Q6PAV2 Mir181a-2-201ENSMUST00000083489 76 ntBASIC1.99□□□□□ -2.09
Herc4Q6PAV2 Mir29c-201ENSMUST00000083614 88 ntBASIC1.99□□□□□ -2.09
Herc4Q6PAV2 Gm37096-201ENSMUST00000192317 2058 ntBASIC1.98□□□□□ -2.09
Herc4Q6PAV2 Gm14296-202ENSMUST00000108931 750 ntBASIC1.98□□□□□ -2.09
Herc4Q6PAV2 Gm23109-201ENSMUST00000116867 126 ntBASIC1.98□□□□□ -2.09
Herc4Q6PAV2 Gm13518-201ENSMUST00000120018 233 ntBASIC1.98□□□□□ -2.09
Herc4Q6PAV2 Gm26255-201ENSMUST00000122492 103 ntBASIC1.98□□□□□ -2.09
Herc4Q6PAV2 Gm26157-201ENSMUST00000158974 126 ntBASIC1.98□□□□□ -2.09
Herc4Q6PAV2 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.98□□□□□ -2.09
Herc4Q6PAV2 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC1.98□□□□□ -2.09
Herc4Q6PAV2 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Herc4Q6PAV2 Gm23793-201ENSMUST00000179396 117 ntBASIC1.98□□□□□ -2.09
Herc4Q6PAV2 Gm28016-201ENSMUST00000184594 196 ntBASIC1.98□□□□□ -2.09
Herc4Q6PAV2 Gm28418-201ENSMUST00000186179 423 ntBASIC1.98□□□□□ -2.09
Herc4Q6PAV2 Igkv4-65-201ENSMUST00000196986 358 ntBASIC1.98□□□□□ -2.09
Herc4Q6PAV2 Mir7021-201ENSMUST00000197026 63 ntBASIC1.98□□□□□ -2.09
Herc4Q6PAV2 Gm43865-201ENSMUST00000204721 127 ntBASIC1.98□□□□□ -2.09
Herc4Q6PAV2 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC1.98□□□□□ -2.09
Herc4Q6PAV2 AC125311.1-201ENSMUST00000226950 220 ntBASIC1.98□□□□□ -2.09
Herc4Q6PAV2 Gm25788-201ENSMUST00000082721 131 ntBASIC1.98□□□□□ -2.09
Herc4Q6PAV2 Mir301-201ENSMUST00000083655 86 ntBASIC1.98□□□□□ -2.09
Herc4Q6PAV2 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.98□□□□□ -2.09
Herc4Q6PAV2 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Herc4Q6PAV2 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.98□□□□□ -2.09
Herc4Q6PAV2 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
Herc4Q6PAV2 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Herc4Q6PAV2 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.97□□□□□ -2.09
Herc4Q6PAV2 Gm22021-201ENSMUST00000104353 107 ntBASIC1.97□□□□□ -2.09
Herc4Q6PAV2 Gm15215-201ENSMUST00000117773 489 ntBASIC1.97□□□□□ -2.09
Herc4Q6PAV2 Gm25115-201ENSMUST00000157187 140 ntBASIC1.97□□□□□ -2.09
Herc4Q6PAV2 Gm24726-201ENSMUST00000158232 121 ntBASIC1.97□□□□□ -2.09
Herc4Q6PAV2 Gm29005-201ENSMUST00000186773 320 ntBASIC1.97□□□□□ -2.09
Herc4Q6PAV2 Gm43238-201ENSMUST00000196463 359 ntBASIC1.97□□□□□ -2.09
Herc4Q6PAV2 Gm44429-201ENSMUST00000203542 186 ntBASIC1.97□□□□□ -2.09
Herc4Q6PAV2 Gm44811-201ENSMUST00000209120 228 ntBASIC1.97□□□□□ -2.09
Herc4Q6PAV2 AC116460.1-201ENSMUST00000219040 313 ntBASIC1.97□□□□□ -2.09
Herc4Q6PAV2 Gm33654-201ENSMUST00000221704 215 ntBASIC1.97□□□□□ -2.09
Herc4Q6PAV2 Gm21937-201ENSMUST00000222825 218 ntBASIC1.97□□□□□ -2.09
Herc4Q6PAV2 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.97□□□□□ -2.09
Herc4Q6PAV2 Gm25589-201ENSMUST00000082502 166 ntBASIC1.97□□□□□ -2.09
Herc4Q6PAV2 Gm25929-201ENSMUST00000082784 107 ntBASIC1.97□□□□□ -2.09
Herc4Q6PAV2 Mir300-201ENSMUST00000083485 79 ntBASIC1.97□□□□□ -2.09
Herc4Q6PAV2 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.96□□□□□ -2.1
Herc4Q6PAV2 Gm22713-201ENSMUST00000116895 130 ntBASIC1.96□□□□□ -2.1
Herc4Q6PAV2 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC1.96□□□□□ -2.1
Herc4Q6PAV2 Gm12924-201ENSMUST00000121747 318 ntBASIC1.96□□□□□ -2.1
Herc4Q6PAV2 Gm24598-201ENSMUST00000122510 74 ntBASIC1.96□□□□□ -2.1
Herc4Q6PAV2 Gm23214-201ENSMUST00000122716 157 ntBASIC1.96□□□□□ -2.1
Herc4Q6PAV2 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Herc4Q6PAV2 Gm23043-201ENSMUST00000157890 109 ntBASIC1.96□□□□□ -2.1
Herc4Q6PAV2 Gm22085-201ENSMUST00000158344 110 ntBASIC1.96□□□□□ -2.1
Herc4Q6PAV2 Gm24005-201ENSMUST00000158459 296 ntBASIC1.96□□□□□ -2.1
Herc4Q6PAV2 Gm7953-201ENSMUST00000168278 469 ntBASIC1.96□□□□□ -2.1
Herc4Q6PAV2 Gm20613-201ENSMUST00000175828 345 ntBASIC1.96□□□□□ -2.1
Herc4Q6PAV2 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.96□□□□□ -2.1
Herc4Q6PAV2 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.96□□□□□ -2.1
Herc4Q6PAV2 Gm37778-201ENSMUST00000191732 190 ntBASIC1.96□□□□□ -2.1
Herc4Q6PAV2 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.96□□□□□ -2.1
Herc4Q6PAV2 Gm23721-201ENSMUST00000083005 107 ntBASIC1.96□□□□□ -2.1
Herc4Q6PAV2 Gm26314-201ENSMUST00000083891 107 ntBASIC1.96□□□□□ -2.1
Herc4Q6PAV2 Gm14972-201ENSMUST00000121780 364 ntBASIC1.95□□□□□ -2.1
Herc4Q6PAV2 Gm25113-201ENSMUST00000157185 143 ntBASIC1.95□□□□□ -2.1
Herc4Q6PAV2 Gm25658-201ENSMUST00000158472 128 ntBASIC1.95□□□□□ -2.1
Herc4Q6PAV2 Mir6346-201ENSMUST00000183982 81 ntBASIC1.95□□□□□ -2.1
Herc4Q6PAV2 Gm28058-201ENSMUST00000186421 264 ntBASIC1.95□□□□□ -2.1
Herc4Q6PAV2 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.95□□□□□ -2.1
Herc4Q6PAV2 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.95□□□□□ -2.1
Herc4Q6PAV2 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Herc4Q6PAV2 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.95□□□□□ -2.1
Herc4Q6PAV2 Gm18360-201ENSMUST00000173327 1524 ntBASIC1.95□□□□□ -2.1
Herc4Q6PAV2 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
Herc4Q6PAV2 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.94□□□□□ -2.1
Herc4Q6PAV2 Gm25781-201ENSMUST00000122527 84 ntBASIC1.94□□□□□ -2.1
Herc4Q6PAV2 Gm24635-201ENSMUST00000122712 128 ntBASIC1.94□□□□□ -2.1
Herc4Q6PAV2 Gm24394-201ENSMUST00000158141 123 ntBASIC1.94□□□□□ -2.1
Herc4Q6PAV2 Gm22113-201ENSMUST00000158343 104 ntBASIC1.94□□□□□ -2.1
Herc4Q6PAV2 Gm22945-201ENSMUST00000158557 157 ntBASIC1.94□□□□□ -2.1
Herc4Q6PAV2 Gm24572-201ENSMUST00000175505 88 ntBASIC1.94□□□□□ -2.1
Herc4Q6PAV2 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.94□□□□□ -2.1
Herc4Q6PAV2 Gm27722-201ENSMUST00000183908 76 ntBASIC1.94□□□□□ -2.1
Herc4Q6PAV2 Gm28717-201ENSMUST00000189950 315 ntBASIC1.94□□□□□ -2.1
Herc4Q6PAV2 Gm29490-201ENSMUST00000190923 342 ntBASIC1.94□□□□□ -2.1
Herc4Q6PAV2 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.94□□□□□ -2.1
Herc4Q6PAV2 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.94□□□□□ -2.1
Herc4Q6PAV2 Gm25079-201ENSMUST00000082529 203 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 1092.8 ms