Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm23142-201ENSMUST00000101848 105 ntBASIC2.06□□□□□ -2.08
Ctr9Q62018 Gm26240-201ENSMUST00000101893 105 ntBASIC2.06□□□□□ -2.08
Ctr9Q62018 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Ctr9Q62018 Gm26249-201ENSMUST00000116708 118 ntBASIC2.06□□□□□ -2.08
Ctr9Q62018 Snord11-201ENSMUST00000158468 84 ntBASIC2.06□□□□□ -2.08
Ctr9Q62018 Gm24053-201ENSMUST00000158620 105 ntBASIC2.06□□□□□ -2.08
Ctr9Q62018 Gm24573-201ENSMUST00000175499 112 ntBASIC2.06□□□□□ -2.08
Ctr9Q62018 Gm24656-201ENSMUST00000177548 132 ntBASIC2.06□□□□□ -2.08
Ctr9Q62018 Gm28848-201ENSMUST00000189984 168 ntBASIC2.06□□□□□ -2.08
Ctr9Q62018 Gm37313-201ENSMUST00000191673 290 ntBASIC2.06□□□□□ -2.08
Ctr9Q62018 Gm43676-201ENSMUST00000197532 540 ntBASIC2.06□□□□□ -2.08
Ctr9Q62018 Gm43978-201ENSMUST00000203491 451 ntBASIC2.06□□□□□ -2.08
Ctr9Q62018 Gm44182-201ENSMUST00000204052 115 ntBASIC2.06□□□□□ -2.08
Ctr9Q62018 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC2.06□□□□□ -2.08
Ctr9Q62018 Gm7240-201ENSMUST00000220769 664 ntBASIC2.06□□□□□ -2.08
Ctr9Q62018 Gm6109-201ENSMUST00000223297 348 ntBASIC2.06□□□□□ -2.08
Ctr9Q62018 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.06□□□□□ -2.08
Ctr9Q62018 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
Ctr9Q62018 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.05□□□□□ -2.08
Ctr9Q62018 Gm12926-201ENSMUST00000121158 409 ntBASIC2.05□□□□□ -2.08
Ctr9Q62018 Gm23779-201ENSMUST00000157938 64 ntBASIC2.05□□□□□ -2.08
Ctr9Q62018 Gm22386-201ENSMUST00000158192 129 ntBASIC2.05□□□□□ -2.08
Ctr9Q62018 Gm17919-201ENSMUST00000173344 312 ntBASIC2.05□□□□□ -2.08
Ctr9Q62018 Gm25996-201ENSMUST00000175393 117 ntBASIC2.05□□□□□ -2.08
Ctr9Q62018 Gm22263-201ENSMUST00000180060 104 ntBASIC2.05□□□□□ -2.08
Ctr9Q62018 Gm28418-201ENSMUST00000186179 423 ntBASIC2.05□□□□□ -2.08
Ctr9Q62018 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC2.05□□□□□ -2.08
Ctr9Q62018 Gm37404-201ENSMUST00000195726 359 ntBASIC2.05□□□□□ -2.08
Ctr9Q62018 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC2.05□□□□□ -2.08
Ctr9Q62018 Gm43914-201ENSMUST00000203592 594 ntBASIC2.05□□□□□ -2.08
Ctr9Q62018 AC138290.2-201ENSMUST00000218822 369 ntBASIC2.05□□□□□ -2.08
Ctr9Q62018 AC154245.1-201ENSMUST00000224615 601 ntBASIC2.05□□□□□ -2.08
Ctr9Q62018 AL590614.1-201ENSMUST00000226037 268 ntBASIC2.05□□□□□ -2.08
Ctr9Q62018 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Ctr9Q62018 Gm22062-201ENSMUST00000082563 107 ntBASIC2.05□□□□□ -2.08
Ctr9Q62018 Gm25937-201ENSMUST00000083912 107 ntBASIC2.05□□□□□ -2.08
Ctr9Q62018 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Ctr9Q62018 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Ctr9Q62018 Gm14307-201ENSMUST00000118930 291 ntBASIC2.04□□□□□ -2.08
Ctr9Q62018 Gm14678-201ENSMUST00000121396 482 ntBASIC2.04□□□□□ -2.08
Ctr9Q62018 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC2.04□□□□□ -2.08
Ctr9Q62018 Gm25781-201ENSMUST00000122527 84 ntBASIC2.04□□□□□ -2.08
Ctr9Q62018 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Ctr9Q62018 Gm14297-201ENSMUST00000129110 291 ntBASIC2.04□□□□□ -2.08
Ctr9Q62018 Gm16362-201ENSMUST00000135189 214 ntBASIC2.04□□□□□ -2.08
Ctr9Q62018 Gm16358-201ENSMUST00000146046 210 ntBASIC2.04□□□□□ -2.08
Ctr9Q62018 Gm25888-201ENSMUST00000157778 302 ntBASIC2.04□□□□□ -2.08
Ctr9Q62018 Gm25284-201ENSMUST00000180345 141 ntBASIC2.04□□□□□ -2.08
Ctr9Q62018 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Ctr9Q62018 Gm44063-201ENSMUST00000203307 376 ntBASIC2.04□□□□□ -2.08
Ctr9Q62018 Gm44429-201ENSMUST00000203542 186 ntBASIC2.04□□□□□ -2.08
Ctr9Q62018 Gm44654-201ENSMUST00000208052 329 ntBASIC2.04□□□□□ -2.08
Ctr9Q62018 AC069074.1-201ENSMUST00000220048 381 ntBASIC2.04□□□□□ -2.08
Ctr9Q62018 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.04□□□□□ -2.08
Ctr9Q62018 Gm23412-201ENSMUST00000083017 107 ntBASIC2.04□□□□□ -2.08
Ctr9Q62018 Gm26126-201ENSMUST00000083188 164 ntBASIC2.04□□□□□ -2.08
Ctr9Q62018 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC2.04□□□□□ -2.08
Ctr9Q62018 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC2.04□□□□□ -2.08
Ctr9Q62018 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC2.03□□□□□ -2.08
Ctr9Q62018 Gm22761-201ENSMUST00000102278 96 ntBASIC2.03□□□□□ -2.08
Ctr9Q62018 Gm13885-201ENSMUST00000117569 187 ntBASIC2.03□□□□□ -2.08
Ctr9Q62018 Gm12785-201ENSMUST00000122052 172 ntBASIC2.03□□□□□ -2.08
Ctr9Q62018 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC2.03□□□□□ -2.08
Ctr9Q62018 Gm23262-201ENSMUST00000158323 168 ntBASIC2.03□□□□□ -2.08
Ctr9Q62018 Gm25051-201ENSMUST00000158602 249 ntBASIC2.03□□□□□ -2.08
Ctr9Q62018 Gm24308-201ENSMUST00000177773 114 ntBASIC2.03□□□□□ -2.08
Ctr9Q62018 Mir6951-201ENSMUST00000183910 75 ntBASIC2.03□□□□□ -2.08
Ctr9Q62018 Gm28257-201ENSMUST00000185244 463 ntBASIC2.03□□□□□ -2.08
Ctr9Q62018 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC2.03□□□□□ -2.08
Ctr9Q62018 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC2.03□□□□□ -2.08
Ctr9Q62018 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC2.03□□□□□ -2.08
Ctr9Q62018 AC117232.1-201ENSMUST00000197964 119 ntBASIC2.03□□□□□ -2.08
Ctr9Q62018 Gm44468-201ENSMUST00000199516 105 ntBASIC2.03□□□□□ -2.08
Ctr9Q62018 Gm44010-201ENSMUST00000204432 331 ntBASIC2.03□□□□□ -2.08
Ctr9Q62018 Gm45386-201ENSMUST00000210194 218 ntBASIC2.03□□□□□ -2.08
Ctr9Q62018 AC122905.2-201ENSMUST00000220325 269 ntBASIC2.03□□□□□ -2.08
Ctr9Q62018 AC130829.3-201ENSMUST00000222735 154 ntBASIC2.03□□□□□ -2.08
Ctr9Q62018 Gm25512-201ENSMUST00000083863 107 ntBASIC2.03□□□□□ -2.08
Ctr9Q62018 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
Ctr9Q62018 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Ctr9Q62018 Gm15215-201ENSMUST00000117773 489 ntBASIC2.02□□□□□ -2.09
Ctr9Q62018 Gm13729-201ENSMUST00000120328 406 ntBASIC2.02□□□□□ -2.09
Ctr9Q62018 Gm24348-201ENSMUST00000158710 130 ntBASIC2.02□□□□□ -2.09
Ctr9Q62018 Gm7592-201ENSMUST00000160674 627 ntBASIC2.02□□□□□ -2.09
Ctr9Q62018 Gm25933-201ENSMUST00000178943 108 ntBASIC2.02□□□□□ -2.09
Ctr9Q62018 Gm5900-201ENSMUST00000179862 375 ntBASIC2.02□□□□□ -2.09
Ctr9Q62018 Mir6376-201ENSMUST00000185149 131 ntBASIC2.02□□□□□ -2.09
Ctr9Q62018 Gm28288-201ENSMUST00000191019 214 ntBASIC2.02□□□□□ -2.09
Ctr9Q62018 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC2.02□□□□□ -2.09
Ctr9Q62018 Gm45673-201ENSMUST00000210293 358 ntBASIC2.02□□□□□ -2.09
Ctr9Q62018 AC167669.4-201ENSMUST00000225967 140 ntBASIC2.02□□□□□ -2.09
Ctr9Q62018 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Ctr9Q62018 Mir133a-1-201ENSMUST00000083465 68 ntBASIC2.02□□□□□ -2.09
Ctr9Q62018 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
Ctr9Q62018 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Ctr9Q62018 Mir669l-201ENSMUST00000103771 98 ntBASIC2.01□□□□□ -2.09
Ctr9Q62018 Gm25059-201ENSMUST00000157367 117 ntBASIC2.01□□□□□ -2.09
Ctr9Q62018 Gm22598-201ENSMUST00000157600 127 ntBASIC2.01□□□□□ -2.09
Ctr9Q62018 Gm22535-201ENSMUST00000158174 119 ntBASIC2.01□□□□□ -2.09
Ctr9Q62018 Gm28995-201ENSMUST00000186625 261 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 101.5 ms