Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
CtcfQ61164 Gm23705-201ENSMUST00000104370 130 ntBASIC2.65□□□□□ -1.99
CtcfQ61164 Defa-ps8-201ENSMUST00000120972 279 ntBASIC2.65□□□□□ -1.99
CtcfQ61164 Gm22500-201ENSMUST00000158982 99 ntBASIC2.65□□□□□ -1.99
CtcfQ61164 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC2.65□□□□□ -1.99
CtcfQ61164 Ighv12-2-201ENSMUST00000191949 362 ntBASIC2.65□□□□□ -1.99
CtcfQ61164 Trbv6-201ENSMUST00000193743 276 ntBASIC2.65□□□□□ -1.99
CtcfQ61164 Mir3535-201ENSMUST00000197651 147 ntBASIC2.65□□□□□ -1.99
CtcfQ61164 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC2.65□□□□□ -1.99
CtcfQ61164 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC2.65□□□□□ -1.99
CtcfQ61164 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CtcfQ61164 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.64□□□□□ -1.99
CtcfQ61164 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
CtcfQ61164 Gm24582-201ENSMUST00000103967 103 ntBASIC2.64□□□□□ -1.99
CtcfQ61164 Gm25875-201ENSMUST00000104323 107 ntBASIC2.64□□□□□ -1.99
CtcfQ61164 Gm37361-201ENSMUST00000194345 132 ntBASIC2.64□□□□□ -1.99
CtcfQ61164 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC2.64□□□□□ -1.99
CtcfQ61164 Gm44010-201ENSMUST00000204432 331 ntBASIC2.64□□□□□ -1.99
CtcfQ61164 AC135292.1-201ENSMUST00000227665 204 ntBASIC2.64□□□□□ -1.99
CtcfQ61164 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
CtcfQ61164 Mir32-201ENSMUST00000083610 70 ntBASIC2.64□□□□□ -1.99
CtcfQ61164 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
CtcfQ61164 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
CtcfQ61164 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
CtcfQ61164 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CtcfQ61164 Gm23841-201ENSMUST00000116951 114 ntBASIC2.63□□□□□ -1.99
CtcfQ61164 Gm15714-201ENSMUST00000117168 250 ntBASIC2.63□□□□□ -1.99
CtcfQ61164 Gm12934-201ENSMUST00000119221 343 ntBASIC2.63□□□□□ -1.99
CtcfQ61164 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.63□□□□□ -1.99
CtcfQ61164 Gm25384-201ENSMUST00000157807 105 ntBASIC2.63□□□□□ -1.99
CtcfQ61164 Gm25454-201ENSMUST00000157947 315 ntBASIC2.63□□□□□ -1.99
CtcfQ61164 Gm23033-201ENSMUST00000157996 134 ntBASIC2.63□□□□□ -1.99
CtcfQ61164 Gm23223-201ENSMUST00000158119 127 ntBASIC2.63□□□□□ -1.99
CtcfQ61164 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CtcfQ61164 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.63□□□□□ -1.99
CtcfQ61164 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.63□□□□□ -1.99
CtcfQ61164 Gm42578-201ENSMUST00000199960 194 ntBASIC2.63□□□□□ -1.99
CtcfQ61164 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CtcfQ61164 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC2.63□□□□□ -1.99
CtcfQ61164 CT954323.1-201ENSMUST00000222774 229 ntBASIC2.63□□□□□ -1.99
CtcfQ61164 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.63□□□□□ -1.99
CtcfQ61164 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
CtcfQ61164 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC2.63□□□□□ -1.99
CtcfQ61164 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
CtcfQ61164 Gm14894-201ENSMUST00000117170 270 ntBASIC2.62□□□□□ -1.99
CtcfQ61164 Gm15896-201ENSMUST00000118045 440 ntBASIC2.62□□□□□ -1.99
CtcfQ61164 Gm12550-201ENSMUST00000118478 329 ntBASIC2.62□□□□□ -1.99
CtcfQ61164 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.62□□□□□ -1.99
CtcfQ61164 Gm26479-201ENSMUST00000122620 106 ntBASIC2.62□□□□□ -1.99
CtcfQ61164 Gm22984-201ENSMUST00000122751 122 ntBASIC2.62□□□□□ -1.99
CtcfQ61164 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.62□□□□□ -1.99
CtcfQ61164 Gm23892-201ENSMUST00000158105 130 ntBASIC2.62□□□□□ -1.99
CtcfQ61164 Mir3569-201ENSMUST00000185080 58 ntBASIC2.62□□□□□ -1.99
CtcfQ61164 Gm37449-201ENSMUST00000193016 270 ntBASIC2.62□□□□□ -1.99
CtcfQ61164 Gm18658-201ENSMUST00000195558 270 ntBASIC2.62□□□□□ -1.99
CtcfQ61164 Mir376a-201ENSMUST00000197584 68 ntBASIC2.62□□□□□ -1.99
CtcfQ61164 Gm45452-201ENSMUST00000210905 177 ntBASIC2.62□□□□□ -1.99
CtcfQ61164 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC2.62□□□□□ -1.99
CtcfQ61164 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.62□□□□□ -1.99
CtcfQ61164 Gm5899-201ENSMUST00000071770 270 ntBASIC2.62□□□□□ -1.99
CtcfQ61164 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.62□□□□□ -1.99
CtcfQ61164 Gm22062-201ENSMUST00000082563 107 ntBASIC2.62□□□□□ -1.99
CtcfQ61164 Gm22620-201ENSMUST00000082700 133 ntBASIC2.62□□□□□ -1.99
CtcfQ61164 Gm23246-201ENSMUST00000083371 67 ntBASIC2.62□□□□□ -1.99
CtcfQ61164 Gm26314-201ENSMUST00000083891 107 ntBASIC2.62□□□□□ -1.99
CtcfQ61164 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
CtcfQ61164 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
CtcfQ61164 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.62□□□□□ -1.99
CtcfQ61164 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CtcfQ61164 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
CtcfQ61164 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC2.61□□□□□ -1.99
CtcfQ61164 Gm13588-201ENSMUST00000120026 135 ntBASIC2.61□□□□□ -1.99
CtcfQ61164 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.61□□□□□ -1.99
CtcfQ61164 Gm13862-201ENSMUST00000121220 197 ntBASIC2.61□□□□□ -1.99
CtcfQ61164 Gm14846-201ENSMUST00000121868 216 ntBASIC2.61□□□□□ -1.99
CtcfQ61164 Gm22227-201ENSMUST00000157356 259 ntBASIC2.61□□□□□ -1.99
CtcfQ61164 Gm22348-201ENSMUST00000178674 79 ntBASIC2.61□□□□□ -1.99
CtcfQ61164 Gm27545-201ENSMUST00000184755 202 ntBASIC2.61□□□□□ -1.99
CtcfQ61164 Gm27505-201ENSMUST00000185071 110 ntBASIC2.61□□□□□ -1.99
CtcfQ61164 Gm37763-201ENSMUST00000193445 120 ntBASIC2.61□□□□□ -1.99
CtcfQ61164 Gm37089-201ENSMUST00000195616 129 ntBASIC2.61□□□□□ -1.99
CtcfQ61164 Mir497-201ENSMUST00000200557 84 ntBASIC2.61□□□□□ -1.99
CtcfQ61164 AC159709.1-201ENSMUST00000220445 349 ntBASIC2.61□□□□□ -1.99
CtcfQ61164 Gm18617-201ENSMUST00000222311 259 ntBASIC2.61□□□□□ -1.99
CtcfQ61164 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.61□□□□□ -1.99
CtcfQ61164 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.61□□□□□ -1.99
CtcfQ61164 Gm25636-201ENSMUST00000082666 133 ntBASIC2.61□□□□□ -1.99
CtcfQ61164 Mir133a-1-201ENSMUST00000083465 68 ntBASIC2.61□□□□□ -1.99
CtcfQ61164 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.61□□□□□ -1.99
CtcfQ61164 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.61□□□□□ -1.99
CtcfQ61164 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.61□□□□□ -1.99
CtcfQ61164 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.61□□□□□ -1.99
CtcfQ61164 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.61□□□□□ -1.99
CtcfQ61164 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.61□□□□□ -1.99
CtcfQ61164 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
CtcfQ61164 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.6□□□□□ -1.99
CtcfQ61164 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
CtcfQ61164 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
CtcfQ61164 Gm24423-201ENSMUST00000101982 106 ntBASIC2.6□□□□□ -1.99
CtcfQ61164 Mir465b-1-201ENSMUST00000103940 79 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 91.6 ms