Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
Usf1Q61069 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
Usf1Q61069 Gm25274-201ENSMUST00000104296 135 ntBASIC1.46□□□□□ -2.18
Usf1Q61069 Gm24079-201ENSMUST00000104352 132 ntBASIC1.46□□□□□ -2.18
Usf1Q61069 Mir873a-201ENSMUST00000104863 77 ntBASIC1.46□□□□□ -2.18
Usf1Q61069 Gm14678-201ENSMUST00000121396 482 ntBASIC1.46□□□□□ -2.18
Usf1Q61069 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Usf1Q61069 Gm22221-201ENSMUST00000157362 103 ntBASIC1.46□□□□□ -2.18
Usf1Q61069 Gm22843-201ENSMUST00000157710 134 ntBASIC1.46□□□□□ -2.18
Usf1Q61069 Gm20477-201ENSMUST00000174028 280 ntBASIC1.46□□□□□ -2.18
Usf1Q61069 Gm22510-201ENSMUST00000179304 79 ntBASIC1.46□□□□□ -2.18
Usf1Q61069 Gm26336-201ENSMUST00000179449 79 ntBASIC1.46□□□□□ -2.18
Usf1Q61069 Gm26390-201ENSMUST00000179628 79 ntBASIC1.46□□□□□ -2.18
Usf1Q61069 Gm22263-201ENSMUST00000180060 104 ntBASIC1.46□□□□□ -2.18
Usf1Q61069 Gm44465-201ENSMUST00000199536 114 ntBASIC1.46□□□□□ -2.18
Usf1Q61069 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC1.46□□□□□ -2.18
Usf1Q61069 AC153526.1-201ENSMUST00000219750 190 ntBASIC1.46□□□□□ -2.18
Usf1Q61069 AC126554.1-201ENSMUST00000222161 271 ntBASIC1.46□□□□□ -2.18
Usf1Q61069 Snord68-201ENSMUST00000082516 86 ntBASIC1.46□□□□□ -2.18
Usf1Q61069 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC1.46□□□□□ -2.18
Usf1Q61069 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
Usf1Q61069 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
Usf1Q61069 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.45□□□□□ -2.18
Usf1Q61069 Gm23336-201ENSMUST00000117023 123 ntBASIC1.45□□□□□ -2.18
Usf1Q61069 Gm12432-201ENSMUST00000119540 186 ntBASIC1.45□□□□□ -2.18
Usf1Q61069 Gm11512-201ENSMUST00000119669 663 ntBASIC1.45□□□□□ -2.18
Usf1Q61069 Gm14972-201ENSMUST00000121780 364 ntBASIC1.45□□□□□ -2.18
Usf1Q61069 Gm8121-201ENSMUST00000153583 499 ntBASIC1.45□□□□□ -2.18
Usf1Q61069 Gm22603-201ENSMUST00000157603 96 ntBASIC1.45□□□□□ -2.18
Usf1Q61069 Gm24222-201ENSMUST00000158834 93 ntBASIC1.45□□□□□ -2.18
Usf1Q61069 Gm3027-201ENSMUST00000167579 451 ntBASIC1.45□□□□□ -2.18
Usf1Q61069 Gm23090-201ENSMUST00000177331 78 ntBASIC1.45□□□□□ -2.18
Usf1Q61069 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC1.45□□□□□ -2.18
Usf1Q61069 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC1.45□□□□□ -2.18
Usf1Q61069 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC1.45□□□□□ -2.18
Usf1Q61069 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC1.45□□□□□ -2.18
Usf1Q61069 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC1.45□□□□□ -2.18
Usf1Q61069 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC1.45□□□□□ -2.18
Usf1Q61069 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC1.45□□□□□ -2.18
Usf1Q61069 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC1.45□□□□□ -2.18
Usf1Q61069 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Usf1Q61069 Mir7683-201ENSMUST00000183842 61 ntBASIC1.45□□□□□ -2.18
Usf1Q61069 Gm19901-201ENSMUST00000192191 495 ntBASIC1.45□□□□□ -2.18
Usf1Q61069 Ighv2-8-201ENSMUST00000193935 262 ntBASIC1.45□□□□□ -2.18
Usf1Q61069 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC1.45□□□□□ -2.18
Usf1Q61069 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC1.45□□□□□ -2.18
Usf1Q61069 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.45□□□□□ -2.18
Usf1Q61069 Gm23627-201ENSMUST00000082459 107 ntBASIC1.45□□□□□ -2.18
Usf1Q61069 Gm22502-201ENSMUST00000082488 107 ntBASIC1.45□□□□□ -2.18
Usf1Q61069 Gm22977-201ENSMUST00000082615 107 ntBASIC1.45□□□□□ -2.18
Usf1Q61069 Gm24149-201ENSMUST00000082757 107 ntBASIC1.45□□□□□ -2.18
Usf1Q61069 Gm24805-201ENSMUST00000082931 104 ntBASIC1.45□□□□□ -2.18
Usf1Q61069 Gm24406-201ENSMUST00000083026 128 ntBASIC1.45□□□□□ -2.18
Usf1Q61069 Mir340-201ENSMUST00000083483 98 ntBASIC1.45□□□□□ -2.18
Usf1Q61069 Gm22003-201ENSMUST00000101885 107 ntBASIC1.44□□□□□ -2.18
Usf1Q61069 Mir374b-201ENSMUST00000102314 95 ntBASIC1.44□□□□□ -2.18
Usf1Q61069 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.44□□□□□ -2.18
Usf1Q61069 Gm23122-201ENSMUST00000157645 103 ntBASIC1.44□□□□□ -2.18
Usf1Q61069 Gm24551-201ENSMUST00000158645 92 ntBASIC1.44□□□□□ -2.18
Usf1Q61069 Gm22129-201ENSMUST00000179034 107 ntBASIC1.44□□□□□ -2.18
Usf1Q61069 Gm23191-201ENSMUST00000179147 107 ntBASIC1.44□□□□□ -2.18
Usf1Q61069 Gm23410-201ENSMUST00000179967 107 ntBASIC1.44□□□□□ -2.18
Usf1Q61069 Gm22756-201ENSMUST00000180118 107 ntBASIC1.44□□□□□ -2.18
Usf1Q61069 Gm36891-201ENSMUST00000191995 655 ntBASIC1.44□□□□□ -2.18
Usf1Q61069 Gm45119-201ENSMUST00000207612 199 ntBASIC1.44□□□□□ -2.18
Usf1Q61069 Gm7495-201ENSMUST00000215099 426 ntBASIC1.44□□□□□ -2.18
Usf1Q61069 AC104832.1-201ENSMUST00000222938 550 ntBASIC1.44□□□□□ -2.18
Usf1Q61069 Gm22306-201ENSMUST00000082692 107 ntBASIC1.44□□□□□ -2.18
Usf1Q61069 Gm22505-201ENSMUST00000082956 108 ntBASIC1.44□□□□□ -2.18
Usf1Q61069 Gm22363-201ENSMUST00000083100 108 ntBASIC1.44□□□□□ -2.18
Usf1Q61069 Gm23814-201ENSMUST00000083230 102 ntBASIC1.44□□□□□ -2.18
Usf1Q61069 Gm23095-201ENSMUST00000083446 107 ntBASIC1.44□□□□□ -2.18
Usf1Q61069 Gm23731-201ENSMUST00000083749 107 ntBASIC1.44□□□□□ -2.18
Usf1Q61069 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.43□□□□□ -2.18
Usf1Q61069 Gm23015-201ENSMUST00000104145 128 ntBASIC1.43□□□□□ -2.18
Usf1Q61069 Gm14674-201ENSMUST00000117816 342 ntBASIC1.43□□□□□ -2.18
Usf1Q61069 Gm12417-201ENSMUST00000119153 403 ntBASIC1.43□□□□□ -2.18
Usf1Q61069 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC1.43□□□□□ -2.18
Usf1Q61069 Gm23718-201ENSMUST00000157350 307 ntBASIC1.43□□□□□ -2.18
Usf1Q61069 Gm22386-201ENSMUST00000158192 129 ntBASIC1.43□□□□□ -2.18
Usf1Q61069 Gm22435-201ENSMUST00000158552 128 ntBASIC1.43□□□□□ -2.18
Usf1Q61069 Gm22075-201ENSMUST00000158599 192 ntBASIC1.43□□□□□ -2.18
Usf1Q61069 Gm17100-201ENSMUST00000168963 272 ntBASIC1.43□□□□□ -2.18
Usf1Q61069 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC1.43□□□□□ -2.18
Usf1Q61069 Gm25730-201ENSMUST00000178753 165 ntBASIC1.43□□□□□ -2.18
Usf1Q61069 Gm26180-201ENSMUST00000179942 107 ntBASIC1.43□□□□□ -2.18
Usf1Q61069 Gm27668-201ENSMUST00000184188 120 ntBASIC1.43□□□□□ -2.18
Usf1Q61069 Mir6388-201ENSMUST00000184417 75 ntBASIC1.43□□□□□ -2.18
Usf1Q61069 Mir7241-201ENSMUST00000184532 64 ntBASIC1.43□□□□□ -2.18
Usf1Q61069 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.43□□□□□ -2.18
Usf1Q61069 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.43□□□□□ -2.18
Usf1Q61069 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.43□□□□□ -2.18
Usf1Q61069 Gm44490-201ENSMUST00000198566 127 ntBASIC1.43□□□□□ -2.18
Usf1Q61069 Gm43431-201ENSMUST00000198577 340 ntBASIC1.43□□□□□ -2.18
Usf1Q61069 Gm33654-201ENSMUST00000221704 215 ntBASIC1.43□□□□□ -2.18
Usf1Q61069 Gm21937-201ENSMUST00000222825 218 ntBASIC1.43□□□□□ -2.18
Usf1Q61069 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.43□□□□□ -2.18
Usf1Q61069 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Usf1Q61069 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.42□□□□□ -2.18
Usf1Q61069 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 131.9 ms