Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Scaf1Q5U4C3 Gm25308-201ENSMUST00000104171 158 ntBASIC4.48□□□□□ -1.69
Scaf1Q5U4C3 Mir878-201ENSMUST00000104680 78 ntBASIC4.48□□□□□ -1.69
Scaf1Q5U4C3 Gm11598-201ENSMUST00000119257 357 ntBASIC4.48□□□□□ -1.69
Scaf1Q5U4C3 Gm23101-201ENSMUST00000157550 137 ntBASIC4.48□□□□□ -1.69
Scaf1Q5U4C3 Gm25888-201ENSMUST00000157778 302 ntBASIC4.48□□□□□ -1.69
Scaf1Q5U4C3 Gm26405-201ENSMUST00000158495 100 ntBASIC4.48□□□□□ -1.69
Scaf1Q5U4C3 Gm44256-201ENSMUST00000203304 335 ntBASIC4.48□□□□□ -1.69
Scaf1Q5U4C3 AC157572.3-201ENSMUST00000227288 303 ntBASIC4.48□□□□□ -1.69
Scaf1Q5U4C3 Gm26493-201ENSMUST00000083155 136 ntBASIC4.48□□□□□ -1.69
Scaf1Q5U4C3 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Scaf1Q5U4C3 Gm14387-201ENSMUST00000121827 2055 ntBASIC4.47□□□□□ -1.69
Scaf1Q5U4C3 Gm11471-201ENSMUST00000121824 198 ntBASIC4.47□□□□□ -1.69
Scaf1Q5U4C3 Gm23381-201ENSMUST00000157676 94 ntBASIC4.47□□□□□ -1.69
Scaf1Q5U4C3 Mir1951-201ENSMUST00000157981 89 ntBASIC4.47□□□□□ -1.69
Scaf1Q5U4C3 Gm23194-201ENSMUST00000158813 105 ntBASIC4.47□□□□□ -1.69
Scaf1Q5U4C3 Gm45652-201ENSMUST00000210926 3831 ntBASIC4.47□□□□□ -1.69
Scaf1Q5U4C3 AC153564.2-201ENSMUST00000219464 273 ntBASIC4.47□□□□□ -1.69
Scaf1Q5U4C3 Gm25081-201ENSMUST00000082534 108 ntBASIC4.47□□□□□ -1.69
Scaf1Q5U4C3 Mir128-1-201ENSMUST00000083586 70 ntBASIC4.47□□□□□ -1.69
Scaf1Q5U4C3 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Scaf1Q5U4C3 AC154515.1-201ENSMUST00000226085 2841 ntBASIC4.47□□□□□ -1.69
Scaf1Q5U4C3 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
Scaf1Q5U4C3 Gm11414-201ENSMUST00000121795 263 ntBASIC4.46□□□□□ -1.7
Scaf1Q5U4C3 Gm22988-201ENSMUST00000122759 144 ntBASIC4.46□□□□□ -1.7
Scaf1Q5U4C3 Gm28344-201ENSMUST00000185704 279 ntBASIC4.46□□□□□ -1.7
Scaf1Q5U4C3 Gm44666-201ENSMUST00000208544 391 ntBASIC4.46□□□□□ -1.7
Scaf1Q5U4C3 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC4.46□□□□□ -1.7
Scaf1Q5U4C3 AC101945.1-201ENSMUST00000226734 466 ntBASIC4.46□□□□□ -1.7
Scaf1Q5U4C3 AC166369.3-201ENSMUST00000227286 409 ntBASIC4.46□□□□□ -1.7
Scaf1Q5U4C3 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
Scaf1Q5U4C3 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Scaf1Q5U4C3 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Scaf1Q5U4C3 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Scaf1Q5U4C3 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
Scaf1Q5U4C3 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Scaf1Q5U4C3 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Scaf1Q5U4C3 Gm25376-201ENSMUST00000104340 133 ntBASIC4.45□□□□□ -1.7
Scaf1Q5U4C3 Gm22075-201ENSMUST00000158599 192 ntBASIC4.45□□□□□ -1.7
Scaf1Q5U4C3 Gm43264-201ENSMUST00000202284 325 ntBASIC4.45□□□□□ -1.7
Scaf1Q5U4C3 Gm44600-201ENSMUST00000208540 111 ntBASIC4.45□□□□□ -1.7
Scaf1Q5U4C3 AC124182.1-201ENSMUST00000227091 321 ntBASIC4.45□□□□□ -1.7
Scaf1Q5U4C3 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Scaf1Q5U4C3 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC4.44□□□□□ -1.7
Scaf1Q5U4C3 Gm22221-201ENSMUST00000157362 103 ntBASIC4.44□□□□□ -1.7
Scaf1Q5U4C3 Gm24131-201ENSMUST00000158539 107 ntBASIC4.44□□□□□ -1.7
Scaf1Q5U4C3 Gm17020-201ENSMUST00000172274 274 ntBASIC4.44□□□□□ -1.7
Scaf1Q5U4C3 Gm6105-201ENSMUST00000200580 624 ntBASIC4.44□□□□□ -1.7
Scaf1Q5U4C3 Gm24762-201ENSMUST00000083689 104 ntBASIC4.44□□□□□ -1.7
Scaf1Q5U4C3 Gm42675-201ENSMUST00000197552 4035 ntBASIC4.44□□□□□ -1.7
Scaf1Q5U4C3 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Scaf1Q5U4C3 Gm43268-201ENSMUST00000201536 4055 ntBASIC4.43□□□□□ -1.7
Scaf1Q5U4C3 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC4.43□□□□□ -1.7
Scaf1Q5U4C3 Mir374b-201ENSMUST00000102314 95 ntBASIC4.43□□□□□ -1.7
Scaf1Q5U4C3 Snord89-201ENSMUST00000104516 110 ntBASIC4.43□□□□□ -1.7
Scaf1Q5U4C3 Gm11285-201ENSMUST00000118443 322 ntBASIC4.43□□□□□ -1.7
Scaf1Q5U4C3 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC4.43□□□□□ -1.7
Scaf1Q5U4C3 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC4.43□□□□□ -1.7
Scaf1Q5U4C3 Gm23895-201ENSMUST00000158108 160 ntBASIC4.43□□□□□ -1.7
Scaf1Q5U4C3 Gm22606-201ENSMUST00000158290 103 ntBASIC4.43□□□□□ -1.7
Scaf1Q5U4C3 Gm44223-201ENSMUST00000204854 114 ntBASIC4.43□□□□□ -1.7
Scaf1Q5U4C3 AC171206.2-201ENSMUST00000215252 389 ntBASIC4.43□□□□□ -1.7
Scaf1Q5U4C3 Gm26126-201ENSMUST00000083188 164 ntBASIC4.43□□□□□ -1.7
Scaf1Q5U4C3 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Scaf1Q5U4C3 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Scaf1Q5U4C3 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Scaf1Q5U4C3 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Scaf1Q5U4C3 Gm15303-201ENSMUST00000118676 2624 ntBASIC4.42□□□□□ -1.7
Scaf1Q5U4C3 Gm12213-201ENSMUST00000119924 353 ntBASIC4.42□□□□□ -1.7
Scaf1Q5U4C3 Gm25490-201ENSMUST00000158734 130 ntBASIC4.42□□□□□ -1.7
Scaf1Q5U4C3 Gm26435-201ENSMUST00000179026 107 ntBASIC4.42□□□□□ -1.7
Scaf1Q5U4C3 Gm9370-201ENSMUST00000222787 609 ntBASIC4.42□□□□□ -1.7
Scaf1Q5U4C3 CT033785.1-201ENSMUST00000224872 272 ntBASIC4.42□□□□□ -1.7
Scaf1Q5U4C3 Gm11351-202ENSMUST00000225724 478 ntBASIC4.42□□□□□ -1.7
Scaf1Q5U4C3 Gm27047-201ENSMUST00000183072 1819 ntBASIC4.42□□□□□ -1.7
Scaf1Q5U4C3 Gm43032-201ENSMUST00000197967 3123 ntBASIC4.41□□□□□ -1.7
Scaf1Q5U4C3 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
Scaf1Q5U4C3 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Scaf1Q5U4C3 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Scaf1Q5U4C3 Gm13862-201ENSMUST00000121220 197 ntBASIC4.41□□□□□ -1.7
Scaf1Q5U4C3 Gm24138-201ENSMUST00000157572 114 ntBASIC4.41□□□□□ -1.7
Scaf1Q5U4C3 Gm26022-201ENSMUST00000158663 108 ntBASIC4.41□□□□□ -1.7
Scaf1Q5U4C3 Gm22476-201ENSMUST00000158902 100 ntBASIC4.41□□□□□ -1.7
Scaf1Q5U4C3 Gm38255-201ENSMUST00000194910 2996 ntBASIC4.41□□□□□ -1.7
Scaf1Q5U4C3 Gm44182-201ENSMUST00000204052 115 ntBASIC4.41□□□□□ -1.7
Scaf1Q5U4C3 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC4.41□□□□□ -1.7
Scaf1Q5U4C3 AC183096.2-201ENSMUST00000228733 457 ntBASIC4.41□□□□□ -1.7
Scaf1Q5U4C3 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Scaf1Q5U4C3 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
Scaf1Q5U4C3 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Scaf1Q5U4C3 Gm23671-201ENSMUST00000157472 103 ntBASIC4.4□□□□□ -1.71
Scaf1Q5U4C3 Gm18433-202ENSMUST00000195682 196 ntBASIC4.4□□□□□ -1.71
Scaf1Q5U4C3 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC4.4□□□□□ -1.71
Scaf1Q5U4C3 AC160984.2-201ENSMUST00000224927 791 ntBASIC4.4□□□□□ -1.71
Scaf1Q5U4C3 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Scaf1Q5U4C3 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
Scaf1Q5U4C3 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Scaf1Q5U4C3 Gm25961-201ENSMUST00000157174 135 ntBASIC4.39□□□□□ -1.71
Scaf1Q5U4C3 Gm26099-201ENSMUST00000157248 109 ntBASIC4.39□□□□□ -1.71
Scaf1Q5U4C3 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC4.39□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 140.6 ms