Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gm14674-201ENSMUST00000117816 342 ntBASIC1.04□□□□□ -2.24
Ccdc88aQ5SNZ0 Gm14766-201ENSMUST00000121689 367 ntBASIC1.04□□□□□ -2.24
Ccdc88aQ5SNZ0 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC1.04□□□□□ -2.24
Ccdc88aQ5SNZ0 Gm27607-201ENSMUST00000185162 122 ntBASIC1.04□□□□□ -2.24
Ccdc88aQ5SNZ0 Gm38333-201ENSMUST00000193608 604 ntBASIC1.04□□□□□ -2.24
Ccdc88aQ5SNZ0 Gm45907-201ENSMUST00000213023 193 ntBASIC1.04□□□□□ -2.24
Ccdc88aQ5SNZ0 AC162387.1-201ENSMUST00000213369 213 ntBASIC1.04□□□□□ -2.24
Ccdc88aQ5SNZ0 AC153968.2-201ENSMUST00000215579 1140 ntBASIC1.04□□□□□ -2.24
Ccdc88aQ5SNZ0 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.04□□□□□ -2.24
Ccdc88aQ5SNZ0 Gm22572-201ENSMUST00000082985 105 ntBASIC1.04□□□□□ -2.24
Ccdc88aQ5SNZ0 Mir10a-201ENSMUST00000083585 110 ntBASIC1.04□□□□□ -2.24
Ccdc88aQ5SNZ0 Mir701-201ENSMUST00000102208 109 ntBASIC1.03□□□□□ -2.24
Ccdc88aQ5SNZ0 Gm12779-201ENSMUST00000121496 143 ntBASIC1.03□□□□□ -2.24
Ccdc88aQ5SNZ0 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC1.03□□□□□ -2.24
Ccdc88aQ5SNZ0 Gm25115-201ENSMUST00000157187 140 ntBASIC1.03□□□□□ -2.24
Ccdc88aQ5SNZ0 Gm24726-201ENSMUST00000158232 121 ntBASIC1.03□□□□□ -2.24
Ccdc88aQ5SNZ0 Gm22075-201ENSMUST00000158599 192 ntBASIC1.03□□□□□ -2.24
Ccdc88aQ5SNZ0 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
Ccdc88aQ5SNZ0 Gm24799-201ENSMUST00000178431 79 ntBASIC1.03□□□□□ -2.24
Ccdc88aQ5SNZ0 Gm27878-201ENSMUST00000184000 106 ntBASIC1.03□□□□□ -2.24
Ccdc88aQ5SNZ0 Gm27980-201ENSMUST00000184094 169 ntBASIC1.03□□□□□ -2.24
Ccdc88aQ5SNZ0 Gm27755-201ENSMUST00000184623 132 ntBASIC1.03□□□□□ -2.24
Ccdc88aQ5SNZ0 Gm37923-201ENSMUST00000191624 161 ntBASIC1.03□□□□□ -2.24
Ccdc88aQ5SNZ0 Gm37641-201ENSMUST00000193837 239 ntBASIC1.03□□□□□ -2.24
Ccdc88aQ5SNZ0 Gm44142-201ENSMUST00000203358 311 ntBASIC1.03□□□□□ -2.24
Ccdc88aQ5SNZ0 Gm43914-201ENSMUST00000203592 594 ntBASIC1.03□□□□□ -2.24
Ccdc88aQ5SNZ0 AC153864.2-201ENSMUST00000220424 292 ntBASIC1.03□□□□□ -2.24
Ccdc88aQ5SNZ0 AC132918.1-201ENSMUST00000227877 925 ntBASIC1.03□□□□□ -2.24
Ccdc88aQ5SNZ0 Snord118-201ENSMUST00000082965 135 ntBASIC1.03□□□□□ -2.24
Ccdc88aQ5SNZ0 Gm23453-201ENSMUST00000083326 106 ntBASIC1.03□□□□□ -2.24
Ccdc88aQ5SNZ0 Gm23093-201ENSMUST00000083450 102 ntBASIC1.03□□□□□ -2.24
Ccdc88aQ5SNZ0 Gm14678-201ENSMUST00000121396 482 ntBASIC1.03□□□□□ -2.25
Ccdc88aQ5SNZ0 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC1.03□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm25956-201ENSMUST00000175115 217 ntBASIC1.03□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm23419-201ENSMUST00000175523 84 ntBASIC1.03□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm23725-201ENSMUST00000177876 107 ntBASIC1.03□□□□□ -2.25
Ccdc88aQ5SNZ0 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
Ccdc88aQ5SNZ0 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.03□□□□□ -2.25
Ccdc88aQ5SNZ0 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.03□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm24920-201ENSMUST00000083018 85 ntBASIC1.03□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.25
Ccdc88aQ5SNZ0 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
Ccdc88aQ5SNZ0 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm24282-201ENSMUST00000104232 66 ntBASIC1.02□□□□□ -2.25
Ccdc88aQ5SNZ0 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC1.02□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm14287-201ENSMUST00000121060 117 ntBASIC1.02□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm22217-201ENSMUST00000157556 313 ntBASIC1.02□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm23124-201ENSMUST00000157650 107 ntBASIC1.02□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm24393-201ENSMUST00000158135 97 ntBASIC1.02□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm23025-201ENSMUST00000158769 111 ntBASIC1.02□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC1.02□□□□□ -2.25
Ccdc88aQ5SNZ0 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC1.02□□□□□ -2.25
Ccdc88aQ5SNZ0 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC1.02□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC1.02□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm18775-201ENSMUST00000190763 586 ntBASIC1.02□□□□□ -2.25
Ccdc88aQ5SNZ0 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC1.02□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm42774-201ENSMUST00000198854 283 ntBASIC1.02□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm29848-201ENSMUST00000203107 295 ntBASIC1.02□□□□□ -2.25
Ccdc88aQ5SNZ0 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC1.02□□□□□ -2.25
Ccdc88aQ5SNZ0 AC163033.1-201ENSMUST00000218608 157 ntBASIC1.02□□□□□ -2.25
Ccdc88aQ5SNZ0 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm25541-201ENSMUST00000116888 126 ntBASIC1.01□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm15719-201ENSMUST00000120619 635 ntBASIC1.01□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm22425-201ENSMUST00000158532 138 ntBASIC1.01□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm20438-201ENSMUST00000174441 329 ntBASIC1.01□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm24388-201ENSMUST00000177872 107 ntBASIC1.01□□□□□ -2.25
Ccdc88aQ5SNZ0 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC1.01□□□□□ -2.25
Ccdc88aQ5SNZ0 Mir6346-201ENSMUST00000183982 81 ntBASIC1.01□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC1.01□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm44384-201ENSMUST00000200208 114 ntBASIC1.01□□□□□ -2.25
Ccdc88aQ5SNZ0 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.01□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm44923-201ENSMUST00000206673 85 ntBASIC1.01□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm32300-201ENSMUST00000221735 515 ntBASIC1.01□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm23454-201ENSMUST00000083332 133 ntBASIC1.01□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm25759-201ENSMUST00000103988 129 ntBASIC1.01□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm12417-201ENSMUST00000119153 403 ntBASIC1.01□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm24896-201ENSMUST00000122741 135 ntBASIC1.01□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm25961-201ENSMUST00000157174 135 ntBASIC1.01□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC1.01□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC1.01□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC1.01□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC1.01□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC1.01□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC1.01□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC1.01□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC1.01□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm23144-201ENSMUST00000180226 107 ntBASIC1.01□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm16399-201ENSMUST00000181423 219 ntBASIC1.01□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm42857-201ENSMUST00000200823 339 ntBASIC1.01□□□□□ -2.25
Ccdc88aQ5SNZ0 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm44336-201ENSMUST00000203696 468 ntBASIC1.01□□□□□ -2.25
Ccdc88aQ5SNZ0 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.01□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm37642-201ENSMUST00000193166 1735 ntBASIC1□□□□□ -2.25
Ccdc88aQ5SNZ0 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC1□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC1□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm23983-201ENSMUST00000157142 114 ntBASIC1□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm23854-201ENSMUST00000158378 108 ntBASIC1□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 113.9 ms