Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Trav5d-2-201ENSMUST00000196107 275 ntBASIC-0.12□□□□□ -2.43
Trav3-1Q5R1I8 Trav5n-2-201ENSMUST00000197136 275 ntBASIC-0.12□□□□□ -2.43
Trav3-1Q5R1I8 AL450317.1-201ENSMUST00000213941 291 ntBASIC-0.12□□□□□ -2.43
Trav3-1Q5R1I8 Gm46136-201ENSMUST00000214730 565 ntBASIC-0.12□□□□□ -2.43
Trav3-1Q5R1I8 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC-0.12□□□□□ -2.43
Trav3-1Q5R1I8 Gm46993-201ENSMUST00000220708 259 ntBASIC-0.12□□□□□ -2.43
Trav3-1Q5R1I8 Gm22884-201ENSMUST00000083127 140 ntBASIC-0.12□□□□□ -2.43
Trav3-1Q5R1I8 Gm22577-201ENSMUST00000083731 109 ntBASIC-0.12□□□□□ -2.43
Trav3-1Q5R1I8 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC-0.13□□□□□ -2.43
Trav3-1Q5R1I8 Gm9059-201ENSMUST00000118319 183 ntBASIC-0.13□□□□□ -2.43
Trav3-1Q5R1I8 Gm14568-201ENSMUST00000119321 294 ntBASIC-0.13□□□□□ -2.43
Trav3-1Q5R1I8 Gm25901-201ENSMUST00000158494 130 ntBASIC-0.13□□□□□ -2.43
Trav3-1Q5R1I8 Mir1961-201ENSMUST00000158643 112 ntBASIC-0.13□□□□□ -2.43
Trav3-1Q5R1I8 Gm7925-201ENSMUST00000166690 401 ntBASIC-0.13□□□□□ -2.43
Trav3-1Q5R1I8 Gm23289-201ENSMUST00000175615 108 ntBASIC-0.13□□□□□ -2.43
Trav3-1Q5R1I8 Mir6240-201ENSMUST00000184281 117 ntBASIC-0.13□□□□□ -2.43
Trav3-1Q5R1I8 Gm19901-201ENSMUST00000192191 495 ntBASIC-0.13□□□□□ -2.43
Trav3-1Q5R1I8 Mir468-201ENSMUST00000197332 78 ntBASIC-0.13□□□□□ -2.43
Trav3-1Q5R1I8 Gm43911-201ENSMUST00000203097 76 ntBASIC-0.13□□□□□ -2.43
Trav3-1Q5R1I8 AC153957.1-201ENSMUST00000215235 229 ntBASIC-0.13□□□□□ -2.43
Trav3-1Q5R1I8 AC154636.2-201ENSMUST00000222538 161 ntBASIC-0.13□□□□□ -2.43
Trav3-1Q5R1I8 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC-0.13□□□□□ -2.43
Trav3-1Q5R1I8 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC-0.13□□□□□ -2.43
Trav3-1Q5R1I8 Gm24430-201ENSMUST00000104077 104 ntBASIC-0.14□□□□□ -2.43
Trav3-1Q5R1I8 Gm22786-201ENSMUST00000104086 122 ntBASIC-0.14□□□□□ -2.43
Trav3-1Q5R1I8 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC-0.14□□□□□ -2.43
Trav3-1Q5R1I8 Mir5112-201ENSMUST00000174897 60 ntBASIC-0.14□□□□□ -2.43
Trav3-1Q5R1I8 Gm22239-201ENSMUST00000175220 103 ntBASIC-0.14□□□□□ -2.43
Trav3-1Q5R1I8 Mir1954-201ENSMUST00000175595 86 ntBASIC-0.14□□□□□ -2.43
Trav3-1Q5R1I8 Gm28283-201ENSMUST00000185509 178 ntBASIC-0.14□□□□□ -2.43
Trav3-1Q5R1I8 Gm10193-201ENSMUST00000188288 231 ntBASIC-0.14□□□□□ -2.43
Trav3-1Q5R1I8 Gm44345-201ENSMUST00000199560 135 ntBASIC-0.14□□□□□ -2.43
Trav3-1Q5R1I8 Gm6105-201ENSMUST00000200580 624 ntBASIC-0.14□□□□□ -2.43
Trav3-1Q5R1I8 Gm31520-201ENSMUST00000203048 733 ntBASIC-0.14□□□□□ -2.43
Trav3-1Q5R1I8 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC-0.14□□□□□ -2.43
Trav3-1Q5R1I8 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC-0.14□□□□□ -2.43
Trav3-1Q5R1I8 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC-0.14□□□□□ -2.43
Trav3-1Q5R1I8 AC102369.2-201ENSMUST00000219725 1679 ntBASIC-0.14□□□□□ -2.43
Trav3-1Q5R1I8 Gm10033-201ENSMUST00000072427 1813 ntBASIC-0.15□□□□□ -2.43
Trav3-1Q5R1I8 AC154515.1-201ENSMUST00000226085 2841 ntBASIC-0.15□□□□□ -2.43
Trav3-1Q5R1I8 Gm14400-201ENSMUST00000117234 2135 ntBASIC-0.15□□□□□ -2.43
Trav3-1Q5R1I8 Gm16186-201ENSMUST00000120132 216 ntBASIC-0.15□□□□□ -2.43
Trav3-1Q5R1I8 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC-0.15□□□□□ -2.43
Trav3-1Q5R1I8 Gm25884-201ENSMUST00000157782 62 ntBASIC-0.15□□□□□ -2.43
Trav3-1Q5R1I8 Gm25706-201ENSMUST00000157828 247 ntBASIC-0.15□□□□□ -2.43
Trav3-1Q5R1I8 Gm23821-201ENSMUST00000158738 106 ntBASIC-0.15□□□□□ -2.43
Trav3-1Q5R1I8 Mir3060-201ENSMUST00000175339 83 ntBASIC-0.15□□□□□ -2.43
Trav3-1Q5R1I8 Gm24168-201ENSMUST00000178825 107 ntBASIC-0.15□□□□□ -2.43
Trav3-1Q5R1I8 Gm9022-202ENSMUST00000183285 483 ntBASIC-0.15□□□□□ -2.43
Trav3-1Q5R1I8 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC-0.15□□□□□ -2.43
Trav3-1Q5R1I8 CT485612.2-201ENSMUST00000223014 151 ntBASIC-0.15□□□□□ -2.43
Trav3-1Q5R1I8 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC-0.15□□□□□ -2.43
Trav3-1Q5R1I8 Gm22704-201ENSMUST00000083027 137 ntBASIC-0.15□□□□□ -2.43
Trav3-1Q5R1I8 Gm23744-201ENSMUST00000104231 149 ntBASIC-0.16□□□□□ -2.44
Trav3-1Q5R1I8 Gm6985-201ENSMUST00000121255 271 ntBASIC-0.16□□□□□ -2.44
Trav3-1Q5R1I8 Gm25558-201ENSMUST00000158083 106 ntBASIC-0.16□□□□□ -2.44
Trav3-1Q5R1I8 Gm27760-201ENSMUST00000185048 114 ntBASIC-0.16□□□□□ -2.44
Trav3-1Q5R1I8 Gm28661-201ENSMUST00000188231 681 ntBASIC-0.16□□□□□ -2.44
Trav3-1Q5R1I8 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC-0.16□□□□□ -2.44
Trav3-1Q5R1I8 AC168880.1-201ENSMUST00000225113 707 ntBASIC-0.16□□□□□ -2.44
Trav3-1Q5R1I8 Gm24523-201ENSMUST00000083965 132 ntBASIC-0.16□□□□□ -2.44
Trav3-1Q5R1I8 Gm25485-201ENSMUST00000104120 132 ntBASIC-0.17□□□□□ -2.44
Trav3-1Q5R1I8 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC-0.17□□□□□ -2.44
Trav3-1Q5R1I8 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC-0.17□□□□□ -2.44
Trav3-1Q5R1I8 Gm23535-201ENSMUST00000157542 106 ntBASIC-0.17□□□□□ -2.44
Trav3-1Q5R1I8 Gm23032-201ENSMUST00000157995 107 ntBASIC-0.17□□□□□ -2.44
Trav3-1Q5R1I8 Gm23967-201ENSMUST00000175062 78 ntBASIC-0.17□□□□□ -2.44
Trav3-1Q5R1I8 Gm25874-201ENSMUST00000178030 79 ntBASIC-0.17□□□□□ -2.44
Trav3-1Q5R1I8 Gm21894-201ENSMUST00000179631 546 ntBASIC-0.17□□□□□ -2.44
Trav3-1Q5R1I8 Gm27402-201ENSMUST00000183890 120 ntBASIC-0.17□□□□□ -2.44
Trav3-1Q5R1I8 Gm27898-201ENSMUST00000183987 80 ntBASIC-0.17□□□□□ -2.44
Trav3-1Q5R1I8 Gm27365-201ENSMUST00000184041 177 ntBASIC-0.17□□□□□ -2.44
Trav3-1Q5R1I8 Mir6540-201ENSMUST00000184886 108 ntBASIC-0.17□□□□□ -2.44
Trav3-1Q5R1I8 Gm5116-201ENSMUST00000187732 463 ntBASIC-0.17□□□□□ -2.44
Trav3-1Q5R1I8 Gm29627-201ENSMUST00000187984 463 ntBASIC-0.17□□□□□ -2.44
Trav3-1Q5R1I8 Gm20923-201ENSMUST00000190009 319 ntBASIC-0.17□□□□□ -2.44
Trav3-1Q5R1I8 Gm21088-201ENSMUST00000190875 316 ntBASIC-0.17□□□□□ -2.44
Trav3-1Q5R1I8 Gm37128-201ENSMUST00000192599 232 ntBASIC-0.17□□□□□ -2.44
Trav3-1Q5R1I8 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC-0.17□□□□□ -2.44
Trav3-1Q5R1I8 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC-0.17□□□□□ -2.44
Trav3-1Q5R1I8 AC167669.4-201ENSMUST00000225967 140 ntBASIC-0.17□□□□□ -2.44
Trav3-1Q5R1I8 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC-0.18□□□□□ -2.44
Trav3-1Q5R1I8 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.18□□□□□ -2.44
Trav3-1Q5R1I8 Gm25557-201ENSMUST00000158084 315 ntBASIC-0.18□□□□□ -2.44
Trav3-1Q5R1I8 Gm26004-201ENSMUST00000158804 116 ntBASIC-0.18□□□□□ -2.44
Trav3-1Q5R1I8 Mir7047-201ENSMUST00000184595 64 ntBASIC-0.18□□□□□ -2.44
Trav3-1Q5R1I8 AC162931.1-201ENSMUST00000214184 267 ntBASIC-0.18□□□□□ -2.44
Trav3-1Q5R1I8 Snord82-201ENSMUST00000082889 70 ntBASIC-0.18□□□□□ -2.44
Trav3-1Q5R1I8 Gm6829-201ENSMUST00000119858 360 ntBASIC-0.19□□□□□ -2.44
Trav3-1Q5R1I8 Gm16053-201ENSMUST00000120511 188 ntBASIC-0.19□□□□□ -2.44
Trav3-1Q5R1I8 Gm2768-201ENSMUST00000121062 250 ntBASIC-0.19□□□□□ -2.44
Trav3-1Q5R1I8 Gm22279-201ENSMUST00000157200 93 ntBASIC-0.19□□□□□ -2.44
Trav3-1Q5R1I8 Gm24726-201ENSMUST00000158232 121 ntBASIC-0.19□□□□□ -2.44
Trav3-1Q5R1I8 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC-0.19□□□□□ -2.44
Trav3-1Q5R1I8 Mir3103-201ENSMUST00000175474 67 ntBASIC-0.19□□□□□ -2.44
Trav3-1Q5R1I8 Gm22290-201ENSMUST00000177655 107 ntBASIC-0.19□□□□□ -2.44
Trav3-1Q5R1I8 Gm22583-201ENSMUST00000178031 107 ntBASIC-0.19□□□□□ -2.44
Trav3-1Q5R1I8 Gm25312-201ENSMUST00000178972 107 ntBASIC-0.19□□□□□ -2.44
Trav3-1Q5R1I8 Gm29848-201ENSMUST00000203107 295 ntBASIC-0.19□□□□□ -2.44
Trav3-1Q5R1I8 Mir32-201ENSMUST00000083610 70 ntBASIC-0.19□□□□□ -2.44
Retrieved 100 of 76,532 protein–RNA pairs in 99.5 ms