Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 AC134334.1-201ENSMUST00000214277 255 ntBASIC0.94□□□□□ -2.26
Col27a1Q5QNQ9 Gm25896-201ENSMUST00000083713 136 ntBASIC0.94□□□□□ -2.26
Col27a1Q5QNQ9 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
Col27a1Q5QNQ9 Gm14785-201ENSMUST00000120185 539 ntBASIC0.93□□□□□ -2.26
Col27a1Q5QNQ9 Gm14678-201ENSMUST00000121396 482 ntBASIC0.93□□□□□ -2.26
Col27a1Q5QNQ9 Gm14972-201ENSMUST00000121780 364 ntBASIC0.93□□□□□ -2.26
Col27a1Q5QNQ9 Gm23605-201ENSMUST00000157255 127 ntBASIC0.93□□□□□ -2.26
Col27a1Q5QNQ9 Gm22425-201ENSMUST00000158532 138 ntBASIC0.93□□□□□ -2.26
Col27a1Q5QNQ9 Gm22663-201ENSMUST00000158721 102 ntBASIC0.93□□□□□ -2.26
Col27a1Q5QNQ9 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC0.93□□□□□ -2.26
Col27a1Q5QNQ9 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
Col27a1Q5QNQ9 Gm23355-201ENSMUST00000177614 107 ntBASIC0.93□□□□□ -2.26
Col27a1Q5QNQ9 Gm28862-201ENSMUST00000188246 163 ntBASIC0.93□□□□□ -2.26
Col27a1Q5QNQ9 Gm38261-201ENSMUST00000192608 316 ntBASIC0.93□□□□□ -2.26
Col27a1Q5QNQ9 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
Col27a1Q5QNQ9 AC153968.2-201ENSMUST00000215579 1140 ntBASIC0.93□□□□□ -2.26
Col27a1Q5QNQ9 AC122242.1-201ENSMUST00000224650 304 ntBASIC0.93□□□□□ -2.26
Col27a1Q5QNQ9 Gm23721-201ENSMUST00000083005 107 ntBASIC0.93□□□□□ -2.26
Col27a1Q5QNQ9 Gm24615-201ENSMUST00000083268 113 ntBASIC0.93□□□□□ -2.26
Col27a1Q5QNQ9 Gm23453-201ENSMUST00000083326 106 ntBASIC0.93□□□□□ -2.26
Col27a1Q5QNQ9 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
Col27a1Q5QNQ9 Gm22834-201ENSMUST00000102021 79 ntBASIC0.92□□□□□ -2.26
Col27a1Q5QNQ9 Gm15010-201ENSMUST00000117153 407 ntBASIC0.92□□□□□ -2.26
Col27a1Q5QNQ9 Gm11512-201ENSMUST00000119669 663 ntBASIC0.92□□□□□ -2.26
Col27a1Q5QNQ9 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC0.92□□□□□ -2.26
Col27a1Q5QNQ9 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
Col27a1Q5QNQ9 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC0.92□□□□□ -2.26
Col27a1Q5QNQ9 Gm6182-201ENSMUST00000156439 1208 ntBASIC0.92□□□□□ -2.26
Col27a1Q5QNQ9 Gm22559-201ENSMUST00000157329 134 ntBASIC0.92□□□□□ -2.26
Col27a1Q5QNQ9 Gm24467-201ENSMUST00000157887 126 ntBASIC0.92□□□□□ -2.26
Col27a1Q5QNQ9 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Col27a1Q5QNQ9 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC0.92□□□□□ -2.26
Col27a1Q5QNQ9 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC0.92□□□□□ -2.26
Col27a1Q5QNQ9 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
Col27a1Q5QNQ9 Mir6346-201ENSMUST00000183982 81 ntBASIC0.92□□□□□ -2.26
Col27a1Q5QNQ9 Gm44384-201ENSMUST00000200208 114 ntBASIC0.92□□□□□ -2.26
Col27a1Q5QNQ9 Gm44282-201ENSMUST00000203199 190 ntBASIC0.92□□□□□ -2.26
Col27a1Q5QNQ9 Gm43914-201ENSMUST00000203592 594 ntBASIC0.92□□□□□ -2.26
Col27a1Q5QNQ9 Gm45315-201ENSMUST00000209283 333 ntBASIC0.92□□□□□ -2.26
Col27a1Q5QNQ9 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.92□□□□□ -2.26
Col27a1Q5QNQ9 AC126554.1-201ENSMUST00000222161 271 ntBASIC0.92□□□□□ -2.26
Col27a1Q5QNQ9 AC127371.3-201ENSMUST00000228129 415 ntBASIC0.92□□□□□ -2.26
Col27a1Q5QNQ9 Gm23245-201ENSMUST00000083370 135 ntBASIC0.92□□□□□ -2.26
Col27a1Q5QNQ9 Gm23093-201ENSMUST00000083450 102 ntBASIC0.92□□□□□ -2.26
Col27a1Q5QNQ9 Gm10360-201ENSMUST00000097219 272 ntBASIC0.92□□□□□ -2.26
Col27a1Q5QNQ9 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC0.92□□□□□ -2.26
Col27a1Q5QNQ9 Gm25876-201ENSMUST00000104329 119 ntBASIC0.92□□□□□ -2.26
Col27a1Q5QNQ9 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
Col27a1Q5QNQ9 Gm23854-201ENSMUST00000158378 108 ntBASIC0.92□□□□□ -2.26
Col27a1Q5QNQ9 Gm25956-201ENSMUST00000175115 217 ntBASIC0.92□□□□□ -2.26
Col27a1Q5QNQ9 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Col27a1Q5QNQ9 Gm37869-201ENSMUST00000193385 595 ntBASIC0.92□□□□□ -2.26
Col27a1Q5QNQ9 Gm44336-201ENSMUST00000203696 468 ntBASIC0.92□□□□□ -2.26
Col27a1Q5QNQ9 AC147101.1-201ENSMUST00000217964 312 ntBASIC0.92□□□□□ -2.26
Col27a1Q5QNQ9 AC124346.1-201ENSMUST00000218539 364 ntBASIC0.92□□□□□ -2.26
Col27a1Q5QNQ9 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC0.92□□□□□ -2.26
Col27a1Q5QNQ9 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC0.92□□□□□ -2.26
Col27a1Q5QNQ9 AC167192.2-201ENSMUST00000224794 198 ntBASIC0.92□□□□□ -2.26
Col27a1Q5QNQ9 Ear14-201ENSMUST00000049559 468 ntBASIC0.92□□□□□ -2.26
Col27a1Q5QNQ9 Gm24920-201ENSMUST00000083018 85 ntBASIC0.92□□□□□ -2.26
Col27a1Q5QNQ9 Gm37096-201ENSMUST00000192317 2058 ntBASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 Gm25497-201ENSMUST00000104425 132 ntBASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 Gm22771-201ENSMUST00000104449 91 ntBASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 Gm11862-201ENSMUST00000119678 659 ntBASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 Gm25109-201ENSMUST00000122474 114 ntBASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 Gm23184-201ENSMUST00000122594 131 ntBASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 Gm26089-201ENSMUST00000157898 107 ntBASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 Gm22768-201ENSMUST00000158366 153 ntBASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 Gm20689-201ENSMUST00000176033 279 ntBASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 Gm24799-201ENSMUST00000178431 79 ntBASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 Gm25936-201ENSMUST00000179952 114 ntBASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 Gm28110-201ENSMUST00000185782 315 ntBASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 Gm29057-201ENSMUST00000186468 315 ntBASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 Gm28737-201ENSMUST00000186808 315 ntBASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 Gm29147-201ENSMUST00000186846 315 ntBASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 Gm29118-201ENSMUST00000186908 315 ntBASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 Gm28433-201ENSMUST00000187085 315 ntBASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 Gm29227-201ENSMUST00000187139 315 ntBASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 Gm28759-201ENSMUST00000187621 315 ntBASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 Gm28831-201ENSMUST00000187739 315 ntBASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 Gm29034-201ENSMUST00000188099 315 ntBASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 Gm28752-201ENSMUST00000188340 315 ntBASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 Gm28569-201ENSMUST00000188748 315 ntBASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 Gm28120-201ENSMUST00000188812 315 ntBASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 Gm28369-201ENSMUST00000188993 315 ntBASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 Gm28537-201ENSMUST00000189026 315 ntBASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 Gm28861-201ENSMUST00000189681 315 ntBASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 Gm28717-201ENSMUST00000189950 315 ntBASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 Gm29180-201ENSMUST00000190003 315 ntBASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 Gm21064-202ENSMUST00000190583 278 ntBASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 Gm29575-201ENSMUST00000190597 315 ntBASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 Gm29631-201ENSMUST00000191065 315 ntBASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 Gm28160-201ENSMUST00000191229 315 ntBASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 Gm29469-201ENSMUST00000191448 315 ntBASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 Gm37129-201ENSMUST00000195791 315 ntBASIC0.91□□□□□ -2.26
Col27a1Q5QNQ9 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 127 ms