Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.57□□□□□ -2.16
Usp28Q5I043 Gm11854-201ENSMUST00000117839 446 ntBASIC1.57□□□□□ -2.16
Usp28Q5I043 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC1.57□□□□□ -2.16
Usp28Q5I043 Gm14972-201ENSMUST00000121780 364 ntBASIC1.57□□□□□ -2.16
Usp28Q5I043 Gm24896-201ENSMUST00000122741 135 ntBASIC1.57□□□□□ -2.16
Usp28Q5I043 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC1.57□□□□□ -2.16
Usp28Q5I043 Gm23435-201ENSMUST00000157183 156 ntBASIC1.57□□□□□ -2.16
Usp28Q5I043 Gm24348-201ENSMUST00000158710 130 ntBASIC1.57□□□□□ -2.16
Usp28Q5I043 Gm21827-201ENSMUST00000178247 423 ntBASIC1.57□□□□□ -2.16
Usp28Q5I043 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.57□□□□□ -2.16
Usp28Q5I043 Gm27410-201ENSMUST00000183851 115 ntBASIC1.57□□□□□ -2.16
Usp28Q5I043 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Usp28Q5I043 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
Usp28Q5I043 Gm29657-201ENSMUST00000189807 342 ntBASIC1.57□□□□□ -2.16
Usp28Q5I043 Gm28848-201ENSMUST00000189984 168 ntBASIC1.57□□□□□ -2.16
Usp28Q5I043 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Usp28Q5I043 Gm29107-201ENSMUST00000190910 347 ntBASIC1.57□□□□□ -2.16
Usp28Q5I043 Gm37399-201ENSMUST00000195224 416 ntBASIC1.57□□□□□ -2.16
Usp28Q5I043 Gm43238-201ENSMUST00000196463 359 ntBASIC1.57□□□□□ -2.16
Usp28Q5I043 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.57□□□□□ -2.16
Usp28Q5I043 AC154296.2-201ENSMUST00000214696 545 ntBASIC1.57□□□□□ -2.16
Usp28Q5I043 Gm5023-201ENSMUST00000217442 587 ntBASIC1.57□□□□□ -2.16
Usp28Q5I043 Gm10264-201ENSMUST00000220589 429 ntBASIC1.57□□□□□ -2.16
Usp28Q5I043 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.57□□□□□ -2.16
Usp28Q5I043 Gm25929-201ENSMUST00000082784 107 ntBASIC1.57□□□□□ -2.16
Usp28Q5I043 Gm23041-201ENSMUST00000083868 106 ntBASIC1.57□□□□□ -2.16
Usp28Q5I043 Snora33-201ENSMUST00000093556 129 ntBASIC1.57□□□□□ -2.16
Usp28Q5I043 Gm22713-201ENSMUST00000116895 130 ntBASIC1.56□□□□□ -2.16
Usp28Q5I043 Gm6829-201ENSMUST00000119858 360 ntBASIC1.56□□□□□ -2.16
Usp28Q5I043 Gm22080-201ENSMUST00000157591 106 ntBASIC1.56□□□□□ -2.16
Usp28Q5I043 Gm22664-201ENSMUST00000158719 105 ntBASIC1.56□□□□□ -2.16
Usp28Q5I043 Gm20462-201ENSMUST00000172623 408 ntBASIC1.56□□□□□ -2.16
Usp28Q5I043 Gm24308-201ENSMUST00000177773 114 ntBASIC1.56□□□□□ -2.16
Usp28Q5I043 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC1.56□□□□□ -2.16
Usp28Q5I043 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.56□□□□□ -2.16
Usp28Q5I043 Gm37579-201ENSMUST00000194291 142 ntBASIC1.56□□□□□ -2.16
Usp28Q5I043 Gm25820-202ENSMUST00000197479 128 ntBASIC1.56□□□□□ -2.16
Usp28Q5I043 Gm44429-201ENSMUST00000203542 186 ntBASIC1.56□□□□□ -2.16
Usp28Q5I043 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.56□□□□□ -2.16
Usp28Q5I043 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.56□□□□□ -2.16
Usp28Q5I043 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.56□□□□□ -2.16
Usp28Q5I043 Snord68-201ENSMUST00000082516 86 ntBASIC1.56□□□□□ -2.16
Usp28Q5I043 Mir181a-1-201ENSMUST00000083631 87 ntBASIC1.56□□□□□ -2.16
Usp28Q5I043 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC1.56□□□□□ -2.16
Usp28Q5I043 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.56□□□□□ -2.16
Usp28Q5I043 Gm23142-201ENSMUST00000101848 105 ntBASIC1.55□□□□□ -2.16
Usp28Q5I043 Gm26240-201ENSMUST00000101893 105 ntBASIC1.55□□□□□ -2.16
Usp28Q5I043 Gm23048-201ENSMUST00000157237 129 ntBASIC1.55□□□□□ -2.16
Usp28Q5I043 Gm25392-201ENSMUST00000157335 297 ntBASIC1.55□□□□□ -2.16
Usp28Q5I043 Gm22113-201ENSMUST00000158343 104 ntBASIC1.55□□□□□ -2.16
Usp28Q5I043 Gm25958-201ENSMUST00000175114 71 ntBASIC1.55□□□□□ -2.16
Usp28Q5I043 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC1.55□□□□□ -2.16
Usp28Q5I043 Gm27722-201ENSMUST00000183908 76 ntBASIC1.55□□□□□ -2.16
Usp28Q5I043 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.55□□□□□ -2.16
Usp28Q5I043 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Usp28Q5I043 AC109212.1-201ENSMUST00000215561 427 ntBASIC1.55□□□□□ -2.16
Usp28Q5I043 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC1.55□□□□□ -2.16
Usp28Q5I043 AC102369.1-201ENSMUST00000218415 373 ntBASIC1.55□□□□□ -2.16
Usp28Q5I043 AC125311.1-201ENSMUST00000226950 220 ntBASIC1.55□□□□□ -2.16
Usp28Q5I043 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Usp28Q5I043 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Usp28Q5I043 Gm22685-201ENSMUST00000082848 106 ntBASIC1.55□□□□□ -2.16
Usp28Q5I043 Gm24412-201ENSMUST00000083426 109 ntBASIC1.55□□□□□ -2.16
Usp28Q5I043 Gm26175-201ENSMUST00000083794 131 ntBASIC1.55□□□□□ -2.16
Usp28Q5I043 Mir496a-201ENSMUST00000093627 79 ntBASIC1.55□□□□□ -2.16
Usp28Q5I043 Gm25992-201ENSMUST00000102437 109 ntBASIC1.54□□□□□ -2.16
Usp28Q5I043 Gm25485-201ENSMUST00000104120 132 ntBASIC1.54□□□□□ -2.16
Usp28Q5I043 Gm22032-201ENSMUST00000116946 116 ntBASIC1.54□□□□□ -2.16
Usp28Q5I043 Gm23983-201ENSMUST00000157142 114 ntBASIC1.54□□□□□ -2.16
Usp28Q5I043 Gm23120-201ENSMUST00000157654 287 ntBASIC1.54□□□□□ -2.16
Usp28Q5I043 Gm28257-201ENSMUST00000185244 463 ntBASIC1.54□□□□□ -2.16
Usp28Q5I043 Gm28995-201ENSMUST00000186625 261 ntBASIC1.54□□□□□ -2.16
Usp28Q5I043 Gm33866-201ENSMUST00000196911 289 ntBASIC1.54□□□□□ -2.16
Usp28Q5I043 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC1.54□□□□□ -2.16
Usp28Q5I043 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Usp28Q5I043 Gm22723-201ENSMUST00000083820 129 ntBASIC1.54□□□□□ -2.16
Usp28Q5I043 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
Usp28Q5I043 Mir872-201ENSMUST00000104728 81 ntBASIC1.53□□□□□ -2.16
Usp28Q5I043 Gm14803-201ENSMUST00000117163 361 ntBASIC1.53□□□□□ -2.16
Usp28Q5I043 Gm11859-201ENSMUST00000118099 455 ntBASIC1.53□□□□□ -2.16
Usp28Q5I043 Gm13518-201ENSMUST00000120018 233 ntBASIC1.53□□□□□ -2.16
Usp28Q5I043 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.53□□□□□ -2.16
Usp28Q5I043 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.53□□□□□ -2.16
Usp28Q5I043 Mir1291-201ENSMUST00000199842 117 ntBASIC1.53□□□□□ -2.16
Usp28Q5I043 Gm42960-201ENSMUST00000202160 241 ntBASIC1.53□□□□□ -2.16
Usp28Q5I043 Gm44010-201ENSMUST00000204432 331 ntBASIC1.53□□□□□ -2.16
Usp28Q5I043 Gm44960-201ENSMUST00000207403 141 ntBASIC1.53□□□□□ -2.16
Usp28Q5I043 Snora34-201ENSMUST00000083402 138 ntBASIC1.53□□□□□ -2.16
Usp28Q5I043 Gm18360-201ENSMUST00000173327 1524 ntBASIC1.52□□□□□ -2.17
Usp28Q5I043 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Usp28Q5I043 Gm22193-201ENSMUST00000116868 76 ntBASIC1.52□□□□□ -2.17
Usp28Q5I043 Gm13729-201ENSMUST00000120328 406 ntBASIC1.52□□□□□ -2.17
Usp28Q5I043 Gm23535-201ENSMUST00000157542 106 ntBASIC1.52□□□□□ -2.17
Usp28Q5I043 Gm25831-201ENSMUST00000158924 163 ntBASIC1.52□□□□□ -2.17
Usp28Q5I043 Gm17100-201ENSMUST00000168963 272 ntBASIC1.52□□□□□ -2.17
Usp28Q5I043 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Usp28Q5I043 Gm28717-201ENSMUST00000189950 315 ntBASIC1.52□□□□□ -2.17
Usp28Q5I043 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Usp28Q5I043 Gm44654-201ENSMUST00000208052 329 ntBASIC1.52□□□□□ -2.17
Usp28Q5I043 AC159885.1-201ENSMUST00000222221 199 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 212.2 ms