Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.33□□□□□ -2.2
Shank3Q4ACU6 Gm20102-201ENSMUST00000222445 220 ntBASIC1.33□□□□□ -2.2
Shank3Q4ACU6 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Shank3Q4ACU6 Mir29c-201ENSMUST00000083614 88 ntBASIC1.33□□□□□ -2.2
Shank3Q4ACU6 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
Shank3Q4ACU6 Gm11854-201ENSMUST00000117839 446 ntBASIC1.32□□□□□ -2.2
Shank3Q4ACU6 Gm14774-201ENSMUST00000117857 536 ntBASIC1.32□□□□□ -2.2
Shank3Q4ACU6 Gm24551-201ENSMUST00000158645 92 ntBASIC1.32□□□□□ -2.2
Shank3Q4ACU6 Gm7925-201ENSMUST00000166690 401 ntBASIC1.32□□□□□ -2.2
Shank3Q4ACU6 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.32□□□□□ -2.2
Shank3Q4ACU6 Gm21885-201ENSMUST00000178891 327 ntBASIC1.32□□□□□ -2.2
Shank3Q4ACU6 Gm25121-201ENSMUST00000179846 79 ntBASIC1.32□□□□□ -2.2
Shank3Q4ACU6 Gm27539-201ENSMUST00000184971 224 ntBASIC1.32□□□□□ -2.2
Shank3Q4ACU6 Gm43708-201ENSMUST00000198857 961 ntBASIC1.32□□□□□ -2.2
Shank3Q4ACU6 Gm45386-201ENSMUST00000210194 218 ntBASIC1.32□□□□□ -2.2
Shank3Q4ACU6 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.32□□□□□ -2.2
Shank3Q4ACU6 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.32□□□□□ -2.2
Shank3Q4ACU6 Gm23454-201ENSMUST00000083332 133 ntBASIC1.32□□□□□ -2.2
Shank3Q4ACU6 Gm25651-201ENSMUST00000083782 119 ntBASIC1.32□□□□□ -2.2
Shank3Q4ACU6 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC1.32□□□□□ -2.2
Shank3Q4ACU6 Mir7241-201ENSMUST00000184532 64 ntBASIC1.32□□□□□ -2.2
Shank3Q4ACU6 Gm45315-201ENSMUST00000209283 333 ntBASIC1.32□□□□□ -2.2
Shank3Q4ACU6 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC1.32□□□□□ -2.2
Shank3Q4ACU6 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
Shank3Q4ACU6 Mir93-201ENSMUST00000083593 88 ntBASIC1.32□□□□□ -2.2
Shank3Q4ACU6 Gm25896-201ENSMUST00000083713 136 ntBASIC1.32□□□□□ -2.2
Shank3Q4ACU6 Gm14748-201ENSMUST00000119819 411 ntBASIC1.31□□□□□ -2.2
Shank3Q4ACU6 Gm14392-201ENSMUST00000120332 401 ntBASIC1.31□□□□□ -2.2
Shank3Q4ACU6 Gm14413-201ENSMUST00000122158 408 ntBASIC1.31□□□□□ -2.2
Shank3Q4ACU6 Gm24409-201ENSMUST00000157881 152 ntBASIC1.31□□□□□ -2.2
Shank3Q4ACU6 Gm20689-201ENSMUST00000176033 279 ntBASIC1.31□□□□□ -2.2
Shank3Q4ACU6 Gm21729-201ENSMUST00000180058 664 ntBASIC1.31□□□□□ -2.2
Shank3Q4ACU6 Gm21853-201ENSMUST00000180071 664 ntBASIC1.31□□□□□ -2.2
Shank3Q4ACU6 Mir6355-201ENSMUST00000183687 106 ntBASIC1.31□□□□□ -2.2
Shank3Q4ACU6 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
Shank3Q4ACU6 Gm29495-201ENSMUST00000189319 664 ntBASIC1.31□□□□□ -2.2
Shank3Q4ACU6 Gm43624-201ENSMUST00000197368 180 ntBASIC1.31□□□□□ -2.2
Shank3Q4ACU6 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
Shank3Q4ACU6 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.3□□□□□ -2.2
Shank3Q4ACU6 Gm24172-201ENSMUST00000104127 117 ntBASIC1.3□□□□□ -2.2
Shank3Q4ACU6 Snord98-201ENSMUST00000116819 65 ntBASIC1.3□□□□□ -2.2
Shank3Q4ACU6 Gm15899-201ENSMUST00000128586 238 ntBASIC1.3□□□□□ -2.2
Shank3Q4ACU6 Gm22654-201ENSMUST00000157874 105 ntBASIC1.3□□□□□ -2.2
Shank3Q4ACU6 Gm25491-201ENSMUST00000158733 308 ntBASIC1.3□□□□□ -2.2
Shank3Q4ACU6 Mir6346-201ENSMUST00000183982 81 ntBASIC1.3□□□□□ -2.2
Shank3Q4ACU6 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC1.3□□□□□ -2.2
Shank3Q4ACU6 Gm44870-201ENSMUST00000207291 357 ntBASIC1.3□□□□□ -2.2
Shank3Q4ACU6 Gm2829-201ENSMUST00000213121 499 ntBASIC1.3□□□□□ -2.2
Shank3Q4ACU6 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Shank3Q4ACU6 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Shank3Q4ACU6 Gm26457-201ENSMUST00000082678 78 ntBASIC1.3□□□□□ -2.2
Shank3Q4ACU6 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
Shank3Q4ACU6 Gm15088-201ENSMUST00000117973 1508 ntBASIC1.3□□□□□ -2.2
Shank3Q4ACU6 Gm15098-201ENSMUST00000119036 1508 ntBASIC1.3□□□□□ -2.2
Shank3Q4ACU6 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC1.3□□□□□ -2.2
Shank3Q4ACU6 Gm22048-201ENSMUST00000104721 89 ntBASIC1.29□□□□□ -2.2
Shank3Q4ACU6 Gm16242-201ENSMUST00000117741 334 ntBASIC1.29□□□□□ -2.2
Shank3Q4ACU6 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
Shank3Q4ACU6 Gm29350-201ENSMUST00000189141 541 ntBASIC1.29□□□□□ -2.2
Shank3Q4ACU6 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
Shank3Q4ACU6 Gm18971-201ENSMUST00000197240 374 ntBASIC1.29□□□□□ -2.2
Shank3Q4ACU6 Gm44726-201ENSMUST00000203427 217 ntBASIC1.29□□□□□ -2.2
Shank3Q4ACU6 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC1.29□□□□□ -2.2
Shank3Q4ACU6 AC120394.1-201ENSMUST00000217153 351 ntBASIC1.29□□□□□ -2.2
Shank3Q4ACU6 AC163357.1-201ENSMUST00000220847 233 ntBASIC1.29□□□□□ -2.2
Shank3Q4ACU6 CT010480.5-201ENSMUST00000225026 217 ntBASIC1.29□□□□□ -2.2
Shank3Q4ACU6 AC165106.2-201ENSMUST00000226749 97 ntBASIC1.29□□□□□ -2.2
Shank3Q4ACU6 Gm25788-201ENSMUST00000082721 131 ntBASIC1.29□□□□□ -2.2
Shank3Q4ACU6 Gm25773-201ENSMUST00000116718 127 ntBASIC1.29□□□□□ -2.2
Shank3Q4ACU6 Gm12770-201ENSMUST00000121734 462 ntBASIC1.29□□□□□ -2.2
Shank3Q4ACU6 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC1.29□□□□□ -2.2
Shank3Q4ACU6 Gm17148-201ENSMUST00000164702 249 ntBASIC1.29□□□□□ -2.2
Shank3Q4ACU6 Mir28b-201ENSMUST00000175399 80 ntBASIC1.29□□□□□ -2.2
Shank3Q4ACU6 Gm27624-201ENSMUST00000185047 177 ntBASIC1.29□□□□□ -2.2
Shank3Q4ACU6 Gm44465-201ENSMUST00000199536 114 ntBASIC1.29□□□□□ -2.2
Shank3Q4ACU6 Gm5001-201ENSMUST00000204361 331 ntBASIC1.29□□□□□ -2.2
Shank3Q4ACU6 AC153526.1-201ENSMUST00000219750 190 ntBASIC1.29□□□□□ -2.2
Shank3Q4ACU6 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Shank3Q4ACU6 Gm24623-201ENSMUST00000082616 194 ntBASIC1.29□□□□□ -2.2
Shank3Q4ACU6 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Shank3Q4ACU6 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
Shank3Q4ACU6 Gm13378-201ENSMUST00000117483 336 ntBASIC1.28□□□□□ -2.2
Shank3Q4ACU6 Gm24419-201ENSMUST00000157875 332 ntBASIC1.28□□□□□ -2.2
Shank3Q4ACU6 Gm22447-201ENSMUST00000158155 92 ntBASIC1.28□□□□□ -2.2
Shank3Q4ACU6 Gm24577-201ENSMUST00000158580 63 ntBASIC1.28□□□□□ -2.2
Shank3Q4ACU6 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC1.28□□□□□ -2.2
Shank3Q4ACU6 Gm25956-201ENSMUST00000175115 217 ntBASIC1.28□□□□□ -2.2
Shank3Q4ACU6 Gm24323-201ENSMUST00000175342 77 ntBASIC1.28□□□□□ -2.2
Shank3Q4ACU6 Gm25457-201ENSMUST00000179509 107 ntBASIC1.28□□□□□ -2.2
Shank3Q4ACU6 Mir6341-201ENSMUST00000183490 121 ntBASIC1.28□□□□□ -2.2
Shank3Q4ACU6 Gm37923-201ENSMUST00000191624 161 ntBASIC1.28□□□□□ -2.2
Shank3Q4ACU6 Gm42807-201ENSMUST00000200141 329 ntBASIC1.28□□□□□ -2.2
Shank3Q4ACU6 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.28□□□□□ -2.2
Shank3Q4ACU6 AC164304.1-201ENSMUST00000226920 272 ntBASIC1.28□□□□□ -2.2
Shank3Q4ACU6 AC112972.1-201ENSMUST00000227329 365 ntBASIC1.28□□□□□ -2.2
Shank3Q4ACU6 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Shank3Q4ACU6 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC1.27□□□□□ -2.21
Shank3Q4ACU6 Gm13885-201ENSMUST00000117569 187 ntBASIC1.27□□□□□ -2.21
Shank3Q4ACU6 Gm24598-201ENSMUST00000122510 74 ntBASIC1.27□□□□□ -2.21
Shank3Q4ACU6 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC1.27□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 139 ms