Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm44666-201ENSMUST00000208544 391 ntBASIC1.55□□□□□ -2.16
Upf3aQ3ULJ3 Gm25651-201ENSMUST00000083782 119 ntBASIC1.55□□□□□ -2.16
Upf3aQ3ULJ3 Gm37096-201ENSMUST00000192317 2058 ntBASIC1.55□□□□□ -2.16
Upf3aQ3ULJ3 Gm18360-201ENSMUST00000173327 1524 ntBASIC1.55□□□□□ -2.16
Upf3aQ3ULJ3 Gm14674-201ENSMUST00000117816 342 ntBASIC1.54□□□□□ -2.16
Upf3aQ3ULJ3 Gm15365-201ENSMUST00000122392 300 ntBASIC1.54□□□□□ -2.16
Upf3aQ3ULJ3 Gm22228-201ENSMUST00000157364 101 ntBASIC1.54□□□□□ -2.16
Upf3aQ3ULJ3 Gm3027-201ENSMUST00000167579 451 ntBASIC1.54□□□□□ -2.16
Upf3aQ3ULJ3 Gm7953-201ENSMUST00000168278 469 ntBASIC1.54□□□□□ -2.16
Upf3aQ3ULJ3 Gm24085-201ENSMUST00000175172 116 ntBASIC1.54□□□□□ -2.16
Upf3aQ3ULJ3 Gm23660-201ENSMUST00000178362 79 ntBASIC1.54□□□□□ -2.16
Upf3aQ3ULJ3 Gm24088-201ENSMUST00000179100 79 ntBASIC1.54□□□□□ -2.16
Upf3aQ3ULJ3 Mir6351-201ENSMUST00000183826 99 ntBASIC1.54□□□□□ -2.16
Upf3aQ3ULJ3 Gm27248-201ENSMUST00000184004 166 ntBASIC1.54□□□□□ -2.16
Upf3aQ3ULJ3 Mir7241-201ENSMUST00000184532 64 ntBASIC1.54□□□□□ -2.16
Upf3aQ3ULJ3 Gm28414-201ENSMUST00000190111 294 ntBASIC1.54□□□□□ -2.16
Upf3aQ3ULJ3 Gm36953-201ENSMUST00000195295 268 ntBASIC1.54□□□□□ -2.16
Upf3aQ3ULJ3 Mir6962-201ENSMUST00000199512 63 ntBASIC1.54□□□□□ -2.16
Upf3aQ3ULJ3 Gm44384-201ENSMUST00000200208 114 ntBASIC1.54□□□□□ -2.16
Upf3aQ3ULJ3 AC166358.7-201ENSMUST00000221132 108 ntBASIC1.54□□□□□ -2.16
Upf3aQ3ULJ3 AC125543.5-201ENSMUST00000222799 108 ntBASIC1.54□□□□□ -2.16
Upf3aQ3ULJ3 CT485612.2-201ENSMUST00000223014 151 ntBASIC1.54□□□□□ -2.16
Upf3aQ3ULJ3 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.54□□□□□ -2.16
Upf3aQ3ULJ3 Gm45557-201ENSMUST00000210004 1651 ntBASIC1.54□□□□□ -2.16
Upf3aQ3ULJ3 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.54□□□□□ -2.16
Upf3aQ3ULJ3 Gm12351-201ENSMUST00000118727 292 ntBASIC1.53□□□□□ -2.16
Upf3aQ3ULJ3 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
Upf3aQ3ULJ3 Mir3968-201ENSMUST00000175355 100 ntBASIC1.53□□□□□ -2.16
Upf3aQ3ULJ3 Gm25035-201ENSMUST00000175414 77 ntBASIC1.53□□□□□ -2.16
Upf3aQ3ULJ3 Snord87-201ENSMUST00000175437 87 ntBASIC1.53□□□□□ -2.16
Upf3aQ3ULJ3 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC1.53□□□□□ -2.16
Upf3aQ3ULJ3 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Upf3aQ3ULJ3 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
Upf3aQ3ULJ3 AC159619.2-201ENSMUST00000222924 401 ntBASIC1.53□□□□□ -2.16
Upf3aQ3ULJ3 Gm16976-205ENSMUST00000227324 226 ntBASIC1.53□□□□□ -2.16
Upf3aQ3ULJ3 Gm25589-201ENSMUST00000082502 166 ntBASIC1.53□□□□□ -2.16
Upf3aQ3ULJ3 Gm24805-201ENSMUST00000082931 104 ntBASIC1.53□□□□□ -2.16
Upf3aQ3ULJ3 Gm26314-201ENSMUST00000083891 107 ntBASIC1.53□□□□□ -2.16
Upf3aQ3ULJ3 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Upf3aQ3ULJ3 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Upf3aQ3ULJ3 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.17
Upf3aQ3ULJ3 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.52□□□□□ -2.17
Upf3aQ3ULJ3 Mir223-201ENSMUST00000102112 110 ntBASIC1.52□□□□□ -2.17
Upf3aQ3ULJ3 Gm14296-202ENSMUST00000108931 750 ntBASIC1.52□□□□□ -2.17
Upf3aQ3ULJ3 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Upf3aQ3ULJ3 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC1.52□□□□□ -2.17
Upf3aQ3ULJ3 Gm24333-201ENSMUST00000175101 84 ntBASIC1.52□□□□□ -2.17
Upf3aQ3ULJ3 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Upf3aQ3ULJ3 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Upf3aQ3ULJ3 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.52□□□□□ -2.17
Upf3aQ3ULJ3 Ighv2-8-201ENSMUST00000193935 262 ntBASIC1.52□□□□□ -2.17
Upf3aQ3ULJ3 Gm44482-201ENSMUST00000199232 103 ntBASIC1.52□□□□□ -2.17
Upf3aQ3ULJ3 Gm45704-201ENSMUST00000212582 403 ntBASIC1.52□□□□□ -2.17
Upf3aQ3ULJ3 AC154552.7-201ENSMUST00000222824 156 ntBASIC1.52□□□□□ -2.17
Upf3aQ3ULJ3 Gm22299-201ENSMUST00000082663 136 ntBASIC1.52□□□□□ -2.17
Upf3aQ3ULJ3 Gm10360-201ENSMUST00000097219 272 ntBASIC1.52□□□□□ -2.17
Upf3aQ3ULJ3 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.51□□□□□ -2.17
Upf3aQ3ULJ3 Mir343-201ENSMUST00000102360 75 ntBASIC1.51□□□□□ -2.17
Upf3aQ3ULJ3 Gm25970-201ENSMUST00000157165 86 ntBASIC1.51□□□□□ -2.17
Upf3aQ3ULJ3 Gm24480-201ENSMUST00000157442 103 ntBASIC1.51□□□□□ -2.17
Upf3aQ3ULJ3 Gm24726-201ENSMUST00000158232 121 ntBASIC1.51□□□□□ -2.17
Upf3aQ3ULJ3 Gm24005-201ENSMUST00000158459 296 ntBASIC1.51□□□□□ -2.17
Upf3aQ3ULJ3 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC1.51□□□□□ -2.17
Upf3aQ3ULJ3 Gm27265-201ENSMUST00000183559 77 ntBASIC1.51□□□□□ -2.17
Upf3aQ3ULJ3 Gm43583-201ENSMUST00000199235 303 ntBASIC1.51□□□□□ -2.17
Upf3aQ3ULJ3 Gm45119-201ENSMUST00000207612 199 ntBASIC1.51□□□□□ -2.17
Upf3aQ3ULJ3 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.51□□□□□ -2.17
Upf3aQ3ULJ3 Gm26056-201ENSMUST00000083043 104 ntBASIC1.51□□□□□ -2.17
Upf3aQ3ULJ3 Mir429-201ENSMUST00000083493 83 ntBASIC1.51□□□□□ -2.17
Upf3aQ3ULJ3 Gm26164-201ENSMUST00000083793 104 ntBASIC1.51□□□□□ -2.17
Upf3aQ3ULJ3 Gm25543-201ENSMUST00000122678 312 ntBASIC1.5□□□□□ -2.17
Upf3aQ3ULJ3 Gm22791-201ENSMUST00000157232 145 ntBASIC1.5□□□□□ -2.17
Upf3aQ3ULJ3 Gm25059-201ENSMUST00000157367 117 ntBASIC1.5□□□□□ -2.17
Upf3aQ3ULJ3 Gm22082-201ENSMUST00000157587 161 ntBASIC1.5□□□□□ -2.17
Upf3aQ3ULJ3 Mir7093-201ENSMUST00000184195 101 ntBASIC1.5□□□□□ -2.17
Upf3aQ3ULJ3 Mir6240-201ENSMUST00000184281 117 ntBASIC1.5□□□□□ -2.17
Upf3aQ3ULJ3 Gm38050-201ENSMUST00000191904 238 ntBASIC1.5□□□□□ -2.17
Upf3aQ3ULJ3 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC1.5□□□□□ -2.17
Upf3aQ3ULJ3 Gm43578-201ENSMUST00000201250 459 ntBASIC1.5□□□□□ -2.17
Upf3aQ3ULJ3 Gm44149-201ENSMUST00000204256 226 ntBASIC1.5□□□□□ -2.17
Upf3aQ3ULJ3 Gm7495-201ENSMUST00000215099 426 ntBASIC1.5□□□□□ -2.17
Upf3aQ3ULJ3 Gm33654-201ENSMUST00000221704 215 ntBASIC1.5□□□□□ -2.17
Upf3aQ3ULJ3 Gm21937-201ENSMUST00000222825 218 ntBASIC1.5□□□□□ -2.17
Upf3aQ3ULJ3 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.5□□□□□ -2.17
Upf3aQ3ULJ3 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Upf3aQ3ULJ3 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.49□□□□□ -2.17
Upf3aQ3ULJ3 Gm24598-201ENSMUST00000122510 74 ntBASIC1.49□□□□□ -2.17
Upf3aQ3ULJ3 Gm24896-201ENSMUST00000122741 135 ntBASIC1.49□□□□□ -2.17
Upf3aQ3ULJ3 Gm23983-201ENSMUST00000157142 114 ntBASIC1.49□□□□□ -2.17
Upf3aQ3ULJ3 Gm22435-201ENSMUST00000158552 128 ntBASIC1.49□□□□□ -2.17
Upf3aQ3ULJ3 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.49□□□□□ -2.17
Upf3aQ3ULJ3 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.49□□□□□ -2.17
Upf3aQ3ULJ3 Gm29005-201ENSMUST00000186773 320 ntBASIC1.49□□□□□ -2.17
Upf3aQ3ULJ3 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.49□□□□□ -2.17
Upf3aQ3ULJ3 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.49□□□□□ -2.17
Upf3aQ3ULJ3 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.49□□□□□ -2.17
Upf3aQ3ULJ3 Gm23731-201ENSMUST00000083749 107 ntBASIC1.49□□□□□ -2.17
Upf3aQ3ULJ3 Gm15526-201ENSMUST00000112504 204 ntBASIC1.48□□□□□ -2.17
Upf3aQ3ULJ3 Gm25115-201ENSMUST00000157187 140 ntBASIC1.48□□□□□ -2.17
Upf3aQ3ULJ3 Gm24499-201ENSMUST00000158446 104 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms