Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm29657-201ENSMUST00000189807 342 ntBASIC1.79□□□□□ -2.12
Trafd1Q3UDK1 Gm28848-201ENSMUST00000189984 168 ntBASIC1.79□□□□□ -2.12
Trafd1Q3UDK1 Gm28408-201ENSMUST00000191557 463 ntBASIC1.79□□□□□ -2.12
Trafd1Q3UDK1 Gm3724-201ENSMUST00000197957 349 ntBASIC1.79□□□□□ -2.12
Trafd1Q3UDK1 Gm44419-201ENSMUST00000203338 229 ntBASIC1.79□□□□□ -2.12
Trafd1Q3UDK1 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.79□□□□□ -2.12
Trafd1Q3UDK1 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.79□□□□□ -2.12
Trafd1Q3UDK1 Gm23462-201ENSMUST00000083264 104 ntBASIC1.79□□□□□ -2.12
Trafd1Q3UDK1 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Trafd1Q3UDK1 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.78□□□□□ -2.12
Trafd1Q3UDK1 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
Trafd1Q3UDK1 Gm25938-201ENSMUST00000104139 166 ntBASIC1.78□□□□□ -2.12
Trafd1Q3UDK1 Gm25421-201ENSMUST00000104218 164 ntBASIC1.78□□□□□ -2.12
Trafd1Q3UDK1 Gm12924-201ENSMUST00000121747 318 ntBASIC1.78□□□□□ -2.12
Trafd1Q3UDK1 Gm25956-201ENSMUST00000175115 217 ntBASIC1.78□□□□□ -2.12
Trafd1Q3UDK1 Gm28257-201ENSMUST00000185244 463 ntBASIC1.78□□□□□ -2.12
Trafd1Q3UDK1 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.78□□□□□ -2.12
Trafd1Q3UDK1 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC1.78□□□□□ -2.12
Trafd1Q3UDK1 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC1.78□□□□□ -2.12
Trafd1Q3UDK1 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.78□□□□□ -2.12
Trafd1Q3UDK1 Gm25079-201ENSMUST00000082529 203 ntBASIC1.78□□□□□ -2.12
Trafd1Q3UDK1 Gm25813-201ENSMUST00000082748 191 ntBASIC1.78□□□□□ -2.12
Trafd1Q3UDK1 Gm23412-201ENSMUST00000083017 107 ntBASIC1.78□□□□□ -2.12
Trafd1Q3UDK1 Gm23345-201ENSMUST00000083817 150 ntBASIC1.78□□□□□ -2.12
Trafd1Q3UDK1 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC1.78□□□□□ -2.12
Trafd1Q3UDK1 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
Trafd1Q3UDK1 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Trafd1Q3UDK1 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
Trafd1Q3UDK1 Gm22713-201ENSMUST00000116895 130 ntBASIC1.77□□□□□ -2.13
Trafd1Q3UDK1 Gm14215-201ENSMUST00000120578 221 ntBASIC1.77□□□□□ -2.13
Trafd1Q3UDK1 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Trafd1Q3UDK1 Gm25888-201ENSMUST00000157778 302 ntBASIC1.77□□□□□ -2.13
Trafd1Q3UDK1 Gm22945-201ENSMUST00000158557 157 ntBASIC1.77□□□□□ -2.13
Trafd1Q3UDK1 Gm26024-201ENSMUST00000158657 322 ntBASIC1.77□□□□□ -2.13
Trafd1Q3UDK1 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Trafd1Q3UDK1 Gm22242-201ENSMUST00000175224 118 ntBASIC1.77□□□□□ -2.13
Trafd1Q3UDK1 Gm23289-201ENSMUST00000175615 108 ntBASIC1.77□□□□□ -2.13
Trafd1Q3UDK1 Gm22263-201ENSMUST00000180060 104 ntBASIC1.77□□□□□ -2.13
Trafd1Q3UDK1 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Trafd1Q3UDK1 Mir7679-201ENSMUST00000183379 63 ntBASIC1.77□□□□□ -2.13
Trafd1Q3UDK1 Mir6995-201ENSMUST00000183658 71 ntBASIC1.77□□□□□ -2.13
Trafd1Q3UDK1 Gm28995-201ENSMUST00000186625 261 ntBASIC1.77□□□□□ -2.13
Trafd1Q3UDK1 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.77□□□□□ -2.13
Trafd1Q3UDK1 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.77□□□□□ -2.13
Trafd1Q3UDK1 Gm43676-201ENSMUST00000197532 540 ntBASIC1.77□□□□□ -2.13
Trafd1Q3UDK1 Mir7215-201ENSMUST00000200383 51 ntBASIC1.77□□□□□ -2.13
Trafd1Q3UDK1 Gm43978-201ENSMUST00000203491 451 ntBASIC1.77□□□□□ -2.13
Trafd1Q3UDK1 Gm44010-201ENSMUST00000204432 331 ntBASIC1.77□□□□□ -2.13
Trafd1Q3UDK1 AC132437.1-201ENSMUST00000218308 320 ntBASIC1.77□□□□□ -2.13
Trafd1Q3UDK1 Gm6109-201ENSMUST00000223297 348 ntBASIC1.77□□□□□ -2.13
Trafd1Q3UDK1 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.77□□□□□ -2.13
Trafd1Q3UDK1 Gm26126-201ENSMUST00000083188 164 ntBASIC1.77□□□□□ -2.13
Trafd1Q3UDK1 Gm23246-201ENSMUST00000083371 67 ntBASIC1.77□□□□□ -2.13
Trafd1Q3UDK1 Gm22723-201ENSMUST00000083820 129 ntBASIC1.77□□□□□ -2.13
Trafd1Q3UDK1 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC1.77□□□□□ -2.13
Trafd1Q3UDK1 Gm26329-201ENSMUST00000093723 110 ntBASIC1.77□□□□□ -2.13
Trafd1Q3UDK1 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.77□□□□□ -2.13
Trafd1Q3UDK1 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Trafd1Q3UDK1 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.77□□□□□ -2.13
Trafd1Q3UDK1 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Trafd1Q3UDK1 Gm15162-201ENSMUST00000119325 283 ntBASIC1.76□□□□□ -2.13
Trafd1Q3UDK1 Gm14782-201ENSMUST00000120151 195 ntBASIC1.76□□□□□ -2.13
Trafd1Q3UDK1 Gm15365-201ENSMUST00000122392 300 ntBASIC1.76□□□□□ -2.13
Trafd1Q3UDK1 Gm24348-201ENSMUST00000158710 130 ntBASIC1.76□□□□□ -2.13
Trafd1Q3UDK1 Gm28016-201ENSMUST00000184594 196 ntBASIC1.76□□□□□ -2.13
Trafd1Q3UDK1 Mir7678-201ENSMUST00000185076 71 ntBASIC1.76□□□□□ -2.13
Trafd1Q3UDK1 Gm37162-201ENSMUST00000191708 551 ntBASIC1.76□□□□□ -2.13
Trafd1Q3UDK1 Mir7661-201ENSMUST00000197023 61 ntBASIC1.76□□□□□ -2.13
Trafd1Q3UDK1 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC1.76□□□□□ -2.13
Trafd1Q3UDK1 Gm44182-201ENSMUST00000204052 115 ntBASIC1.76□□□□□ -2.13
Trafd1Q3UDK1 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.76□□□□□ -2.13
Trafd1Q3UDK1 AC130829.3-201ENSMUST00000222735 154 ntBASIC1.76□□□□□ -2.13
Trafd1Q3UDK1 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.76□□□□□ -2.13
Trafd1Q3UDK1 AC151833.1-201ENSMUST00000227752 574 ntBASIC1.76□□□□□ -2.13
Trafd1Q3UDK1 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.76□□□□□ -2.13
Trafd1Q3UDK1 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
Trafd1Q3UDK1 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Trafd1Q3UDK1 Gm22479-201ENSMUST00000122566 81 ntBASIC1.75□□□□□ -2.13
Trafd1Q3UDK1 Gm14298-201ENSMUST00000139032 237 ntBASIC1.75□□□□□ -2.13
Trafd1Q3UDK1 Gm16356-201ENSMUST00000143300 169 ntBASIC1.75□□□□□ -2.13
Trafd1Q3UDK1 Gm7592-201ENSMUST00000160674 627 ntBASIC1.75□□□□□ -2.13
Trafd1Q3UDK1 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.75□□□□□ -2.13
Trafd1Q3UDK1 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Trafd1Q3UDK1 Gm28008-201ENSMUST00000184021 186 ntBASIC1.75□□□□□ -2.13
Trafd1Q3UDK1 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Trafd1Q3UDK1 Gm43583-201ENSMUST00000199235 303 ntBASIC1.75□□□□□ -2.13
Trafd1Q3UDK1 Gm43914-201ENSMUST00000203592 594 ntBASIC1.75□□□□□ -2.13
Trafd1Q3UDK1 Gm44794-201ENSMUST00000206550 411 ntBASIC1.75□□□□□ -2.13
Trafd1Q3UDK1 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.75□□□□□ -2.13
Trafd1Q3UDK1 AC158597.1-201ENSMUST00000216234 150 ntBASIC1.75□□□□□ -2.13
Trafd1Q3UDK1 AC122905.2-201ENSMUST00000220325 269 ntBASIC1.75□□□□□ -2.13
Trafd1Q3UDK1 AC166341.3-201ENSMUST00000221861 114 ntBASIC1.75□□□□□ -2.13
Trafd1Q3UDK1 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.75□□□□□ -2.13
Trafd1Q3UDK1 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Trafd1Q3UDK1 Gm25589-201ENSMUST00000082502 166 ntBASIC1.75□□□□□ -2.13
Trafd1Q3UDK1 Gm26922-201ENSMUST00000082687 72 ntBASIC1.75□□□□□ -2.13
Trafd1Q3UDK1 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Trafd1Q3UDK1 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Trafd1Q3UDK1 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Trafd1Q3UDK1 Mir872-201ENSMUST00000104728 81 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms