Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.06□□□□□ -2.08
Brf2Q3UAW9 AC173345.2-201ENSMUST00000222795 153 ntBASIC2.06□□□□□ -2.08
Brf2Q3UAW9 AC183092.1-201ENSMUST00000224301 153 ntBASIC2.06□□□□□ -2.08
Brf2Q3UAW9 Gm24625-201ENSMUST00000082622 130 ntBASIC2.06□□□□□ -2.08
Brf2Q3UAW9 Mir151-201ENSMUST00000083678 68 ntBASIC2.06□□□□□ -2.08
Brf2Q3UAW9 Gm26111-201ENSMUST00000083969 106 ntBASIC2.06□□□□□ -2.08
Brf2Q3UAW9 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Brf2Q3UAW9 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.06□□□□□ -2.08
Brf2Q3UAW9 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
Brf2Q3UAW9 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.05□□□□□ -2.08
Brf2Q3UAW9 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Brf2Q3UAW9 Gm23472-201ENSMUST00000101806 191 ntBASIC2.05□□□□□ -2.08
Brf2Q3UAW9 Gm23013-201ENSMUST00000104146 106 ntBASIC2.05□□□□□ -2.08
Brf2Q3UAW9 Gm9059-201ENSMUST00000118319 183 ntBASIC2.05□□□□□ -2.08
Brf2Q3UAW9 Gm15986-201ENSMUST00000122153 400 ntBASIC2.05□□□□□ -2.08
Brf2Q3UAW9 Gm24630-201ENSMUST00000122768 106 ntBASIC2.05□□□□□ -2.08
Brf2Q3UAW9 Gm22434-201ENSMUST00000158549 122 ntBASIC2.05□□□□□ -2.08
Brf2Q3UAW9 Gm22114-201ENSMUST00000177756 107 ntBASIC2.05□□□□□ -2.08
Brf2Q3UAW9 Gm24497-201ENSMUST00000177868 191 ntBASIC2.05□□□□□ -2.08
Brf2Q3UAW9 Gm25450-201ENSMUST00000179144 107 ntBASIC2.05□□□□□ -2.08
Brf2Q3UAW9 Gm22510-201ENSMUST00000179304 79 ntBASIC2.05□□□□□ -2.08
Brf2Q3UAW9 Gm26336-201ENSMUST00000179449 79 ntBASIC2.05□□□□□ -2.08
Brf2Q3UAW9 Gm26390-201ENSMUST00000179628 79 ntBASIC2.05□□□□□ -2.08
Brf2Q3UAW9 Gm25939-201ENSMUST00000179876 191 ntBASIC2.05□□□□□ -2.08
Brf2Q3UAW9 Gm27793-201ENSMUST00000183405 76 ntBASIC2.05□□□□□ -2.08
Brf2Q3UAW9 Gm28008-201ENSMUST00000184021 186 ntBASIC2.05□□□□□ -2.08
Brf2Q3UAW9 Gm19777-201ENSMUST00000191940 358 ntBASIC2.05□□□□□ -2.08
Brf2Q3UAW9 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.05□□□□□ -2.08
Brf2Q3UAW9 Gm25796-201ENSMUST00000082645 163 ntBASIC2.05□□□□□ -2.08
Brf2Q3UAW9 Gm23444-201ENSMUST00000082922 191 ntBASIC2.05□□□□□ -2.08
Brf2Q3UAW9 Gm24615-201ENSMUST00000083268 113 ntBASIC2.05□□□□□ -2.08
Brf2Q3UAW9 Gm15102-201ENSMUST00000118740 1502 ntBASIC2.05□□□□□ -2.08
Brf2Q3UAW9 Gm15101-201ENSMUST00000178818 1502 ntBASIC2.05□□□□□ -2.08
Brf2Q3UAW9 CT030170.3-201ENSMUST00000221205 1815 ntBASIC2.05□□□□□ -2.08
Brf2Q3UAW9 n-R5s158-201ENSMUST00000104095 118 ntBASIC2.04□□□□□ -2.08
Brf2Q3UAW9 Gm24274-201ENSMUST00000116787 124 ntBASIC2.04□□□□□ -2.08
Brf2Q3UAW9 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC2.04□□□□□ -2.08
Brf2Q3UAW9 Gm11572-201ENSMUST00000119164 120 ntBASIC2.04□□□□□ -2.08
Brf2Q3UAW9 Gm25113-201ENSMUST00000157185 143 ntBASIC2.04□□□□□ -2.08
Brf2Q3UAW9 Gm23759-201ENSMUST00000158351 268 ntBASIC2.04□□□□□ -2.08
Brf2Q3UAW9 Gm2719-201ENSMUST00000191929 444 ntBASIC2.04□□□□□ -2.08
Brf2Q3UAW9 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Brf2Q3UAW9 Gm20144-201ENSMUST00000203031 165 ntBASIC2.04□□□□□ -2.08
Brf2Q3UAW9 Mir429-201ENSMUST00000083493 83 ntBASIC2.04□□□□□ -2.08
Brf2Q3UAW9 Mir107-201ENSMUST00000083660 87 ntBASIC2.04□□□□□ -2.08
Brf2Q3UAW9 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Brf2Q3UAW9 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.04□□□□□ -2.08
Brf2Q3UAW9 Gm43706-201ENSMUST00000198767 2652 ntBASIC2.03□□□□□ -2.08
Brf2Q3UAW9 Gm26015-201ENSMUST00000104402 125 ntBASIC2.03□□□□□ -2.08
Brf2Q3UAW9 Gm25994-201ENSMUST00000175392 101 ntBASIC2.03□□□□□ -2.08
Brf2Q3UAW9 Mir5624-201ENSMUST00000176635 61 ntBASIC2.03□□□□□ -2.08
Brf2Q3UAW9 Gm24390-201ENSMUST00000179578 62 ntBASIC2.03□□□□□ -2.08
Brf2Q3UAW9 Gm27722-201ENSMUST00000183908 76 ntBASIC2.03□□□□□ -2.08
Brf2Q3UAW9 Gm45296-201ENSMUST00000209625 205 ntBASIC2.03□□□□□ -2.08
Brf2Q3UAW9 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Brf2Q3UAW9 AC167140.1-201ENSMUST00000224710 403 ntBASIC2.03□□□□□ -2.08
Brf2Q3UAW9 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.03□□□□□ -2.08
Brf2Q3UAW9 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Brf2Q3UAW9 Gm25078-201ENSMUST00000082530 107 ntBASIC2.03□□□□□ -2.08
Brf2Q3UAW9 Gm25793-201ENSMUST00000083287 107 ntBASIC2.03□□□□□ -2.08
Brf2Q3UAW9 Gm24412-201ENSMUST00000083426 109 ntBASIC2.03□□□□□ -2.08
Brf2Q3UAW9 Snora33-201ENSMUST00000093556 129 ntBASIC2.03□□□□□ -2.08
Brf2Q3UAW9 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
Brf2Q3UAW9 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.02□□□□□ -2.09
Brf2Q3UAW9 Gm14761-201ENSMUST00000121363 262 ntBASIC2.02□□□□□ -2.09
Brf2Q3UAW9 Gm15281-201ENSMUST00000125181 351 ntBASIC2.02□□□□□ -2.09
Brf2Q3UAW9 Mir1949-201ENSMUST00000157434 141 ntBASIC2.02□□□□□ -2.09
Brf2Q3UAW9 Gm25863-201ENSMUST00000158249 329 ntBASIC2.02□□□□□ -2.09
Brf2Q3UAW9 Gm23090-201ENSMUST00000177331 78 ntBASIC2.02□□□□□ -2.09
Brf2Q3UAW9 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC2.02□□□□□ -2.09
Brf2Q3UAW9 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC2.02□□□□□ -2.09
Brf2Q3UAW9 Gm29512-201ENSMUST00000185544 315 ntBASIC2.02□□□□□ -2.09
Brf2Q3UAW9 Gm28110-201ENSMUST00000185782 315 ntBASIC2.02□□□□□ -2.09
Brf2Q3UAW9 Gm29057-201ENSMUST00000186468 315 ntBASIC2.02□□□□□ -2.09
Brf2Q3UAW9 Gm29661-201ENSMUST00000186781 315 ntBASIC2.02□□□□□ -2.09
Brf2Q3UAW9 Gm28737-201ENSMUST00000186808 315 ntBASIC2.02□□□□□ -2.09
Brf2Q3UAW9 Gm29118-201ENSMUST00000186908 315 ntBASIC2.02□□□□□ -2.09
Brf2Q3UAW9 Gm28433-201ENSMUST00000187085 315 ntBASIC2.02□□□□□ -2.09
Brf2Q3UAW9 Gm28759-201ENSMUST00000187621 315 ntBASIC2.02□□□□□ -2.09
Brf2Q3UAW9 Gm28831-201ENSMUST00000187739 315 ntBASIC2.02□□□□□ -2.09
Brf2Q3UAW9 Gm28200-201ENSMUST00000187778 315 ntBASIC2.02□□□□□ -2.09
Brf2Q3UAW9 Gm28752-201ENSMUST00000188340 315 ntBASIC2.02□□□□□ -2.09
Brf2Q3UAW9 Gm29378-201ENSMUST00000188723 315 ntBASIC2.02□□□□□ -2.09
Brf2Q3UAW9 Gm28569-201ENSMUST00000188748 315 ntBASIC2.02□□□□□ -2.09
Brf2Q3UAW9 Gm28120-201ENSMUST00000188812 315 ntBASIC2.02□□□□□ -2.09
Brf2Q3UAW9 Gm28369-201ENSMUST00000188993 315 ntBASIC2.02□□□□□ -2.09
Brf2Q3UAW9 Gm29037-201ENSMUST00000189092 313 ntBASIC2.02□□□□□ -2.09
Brf2Q3UAW9 Gm28909-201ENSMUST00000189406 315 ntBASIC2.02□□□□□ -2.09
Brf2Q3UAW9 Gm28861-201ENSMUST00000189681 315 ntBASIC2.02□□□□□ -2.09
Brf2Q3UAW9 Gm29180-201ENSMUST00000190003 315 ntBASIC2.02□□□□□ -2.09
Brf2Q3UAW9 Gm29575-201ENSMUST00000190597 315 ntBASIC2.02□□□□□ -2.09
Brf2Q3UAW9 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.02□□□□□ -2.09
Brf2Q3UAW9 Gm29469-201ENSMUST00000191448 315 ntBASIC2.02□□□□□ -2.09
Brf2Q3UAW9 Trav15d-3-201ENSMUST00000198604 167 ntBASIC2.02□□□□□ -2.09
Brf2Q3UAW9 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.02□□□□□ -2.09
Brf2Q3UAW9 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC2.02□□□□□ -2.09
Brf2Q3UAW9 Gm25813-201ENSMUST00000082748 191 ntBASIC2.02□□□□□ -2.09
Brf2Q3UAW9 Gm25789-201ENSMUST00000083294 76 ntBASIC2.02□□□□□ -2.09
Brf2Q3UAW9 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2.02□□□□□ -2.09
Brf2Q3UAW9 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 130 ms