Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm22972-201ENSMUST00000083297 131 ntBASIC1.12□□□□□ -2.23
Trim43aQ3TL54 Gm25651-201ENSMUST00000083782 119 ntBASIC1.12□□□□□ -2.23
Trim43aQ3TL54 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.11□□□□□ -2.23
Trim43aQ3TL54 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Trim43aQ3TL54 Gm26249-201ENSMUST00000116708 118 ntBASIC1.11□□□□□ -2.23
Trim43aQ3TL54 Gm26278-201ENSMUST00000157098 132 ntBASIC1.11□□□□□ -2.23
Trim43aQ3TL54 Gm27510-201ENSMUST00000158214 64 ntBASIC1.11□□□□□ -2.23
Trim43aQ3TL54 Gm22425-201ENSMUST00000158532 138 ntBASIC1.11□□□□□ -2.23
Trim43aQ3TL54 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Trim43aQ3TL54 Gm8151-201ENSMUST00000184817 871 ntBASIC1.11□□□□□ -2.23
Trim43aQ3TL54 Gm27656-201ENSMUST00000185055 80 ntBASIC1.11□□□□□ -2.23
Trim43aQ3TL54 Gm29613-201ENSMUST00000185846 313 ntBASIC1.11□□□□□ -2.23
Trim43aQ3TL54 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC1.11□□□□□ -2.23
Trim43aQ3TL54 Gm28995-201ENSMUST00000186625 261 ntBASIC1.11□□□□□ -2.23
Trim43aQ3TL54 Gm29544-201ENSMUST00000188860 313 ntBASIC1.11□□□□□ -2.23
Trim43aQ3TL54 Gm28808-201ENSMUST00000190978 313 ntBASIC1.11□□□□□ -2.23
Trim43aQ3TL54 Gm42834-201ENSMUST00000196845 256 ntBASIC1.11□□□□□ -2.23
Trim43aQ3TL54 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.11□□□□□ -2.23
Trim43aQ3TL54 Gm14797-201ENSMUST00000119378 1480 ntBASIC1.11□□□□□ -2.23
Trim43aQ3TL54 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Trim43aQ3TL54 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.1□□□□□ -2.23
Trim43aQ3TL54 Gm23060-201ENSMUST00000102345 109 ntBASIC1.1□□□□□ -2.23
Trim43aQ3TL54 Gm24338-201ENSMUST00000104205 127 ntBASIC1.1□□□□□ -2.23
Trim43aQ3TL54 Gm24282-201ENSMUST00000104232 66 ntBASIC1.1□□□□□ -2.23
Trim43aQ3TL54 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
Trim43aQ3TL54 Gm26150-201ENSMUST00000157426 151 ntBASIC1.1□□□□□ -2.23
Trim43aQ3TL54 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC1.1□□□□□ -2.23
Trim43aQ3TL54 Mir7039-201ENSMUST00000183852 85 ntBASIC1.1□□□□□ -2.23
Trim43aQ3TL54 Mir7675-201ENSMUST00000184262 58 ntBASIC1.1□□□□□ -2.23
Trim43aQ3TL54 Gm9156-201ENSMUST00000189660 463 ntBASIC1.1□□□□□ -2.23
Trim43aQ3TL54 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.1□□□□□ -2.23
Trim43aQ3TL54 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.1□□□□□ -2.23
Trim43aQ3TL54 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
Trim43aQ3TL54 Gm18188-201ENSMUST00000219386 478 ntBASIC1.1□□□□□ -2.23
Trim43aQ3TL54 AC124772.1-201ENSMUST00000221325 151 ntBASIC1.1□□□□□ -2.23
Trim43aQ3TL54 Gm25586-201ENSMUST00000082499 112 ntBASIC1.1□□□□□ -2.23
Trim43aQ3TL54 Snord96a-201ENSMUST00000082791 81 ntBASIC1.1□□□□□ -2.23
Trim43aQ3TL54 Mir221-201ENSMUST00000083488 95 ntBASIC1.1□□□□□ -2.23
Trim43aQ3TL54 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.1□□□□□ -2.23
Trim43aQ3TL54 Mir374b-201ENSMUST00000102314 95 ntBASIC1.09□□□□□ -2.23
Trim43aQ3TL54 Gm23015-201ENSMUST00000104145 128 ntBASIC1.09□□□□□ -2.23
Trim43aQ3TL54 Gm23705-201ENSMUST00000104370 130 ntBASIC1.09□□□□□ -2.23
Trim43aQ3TL54 Gm22193-201ENSMUST00000116868 76 ntBASIC1.09□□□□□ -2.23
Trim43aQ3TL54 Gm11407-201ENSMUST00000120362 1058 ntBASIC1.09□□□□□ -2.23
Trim43aQ3TL54 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC1.09□□□□□ -2.23
Trim43aQ3TL54 Gm22027-201ENSMUST00000122737 127 ntBASIC1.09□□□□□ -2.23
Trim43aQ3TL54 Gm25914-201ENSMUST00000157618 153 ntBASIC1.09□□□□□ -2.23
Trim43aQ3TL54 Gm22164-201ENSMUST00000158413 106 ntBASIC1.09□□□□□ -2.23
Trim43aQ3TL54 Gm26405-201ENSMUST00000158495 100 ntBASIC1.09□□□□□ -2.23
Trim43aQ3TL54 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
Trim43aQ3TL54 Gm22263-201ENSMUST00000180060 104 ntBASIC1.09□□□□□ -2.23
Trim43aQ3TL54 Gm23523-201ENSMUST00000180190 107 ntBASIC1.09□□□□□ -2.23
Trim43aQ3TL54 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC1.09□□□□□ -2.23
Trim43aQ3TL54 Mir195b-201ENSMUST00000184814 97 ntBASIC1.09□□□□□ -2.23
Trim43aQ3TL54 Gm44337-201ENSMUST00000196553 114 ntBASIC1.09□□□□□ -2.23
Trim43aQ3TL54 Gm44429-201ENSMUST00000203542 186 ntBASIC1.09□□□□□ -2.23
Trim43aQ3TL54 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.09□□□□□ -2.23
Trim43aQ3TL54 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.09□□□□□ -2.23
Trim43aQ3TL54 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.09□□□□□ -2.23
Trim43aQ3TL54 Snord118-201ENSMUST00000082965 135 ntBASIC1.09□□□□□ -2.23
Trim43aQ3TL54 Mir448-201ENSMUST00000083516 112 ntBASIC1.09□□□□□ -2.23
Trim43aQ3TL54 Gm23656-201ENSMUST00000122626 112 ntBASIC1.08□□□□□ -2.24
Trim43aQ3TL54 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC1.08□□□□□ -2.24
Trim43aQ3TL54 Gm26149-201ENSMUST00000157432 108 ntBASIC1.08□□□□□ -2.24
Trim43aQ3TL54 Gm24191-201ENSMUST00000157977 122 ntBASIC1.08□□□□□ -2.24
Trim43aQ3TL54 Gm23893-201ENSMUST00000158106 134 ntBASIC1.08□□□□□ -2.24
Trim43aQ3TL54 Gm25371-201ENSMUST00000158162 101 ntBASIC1.08□□□□□ -2.24
Trim43aQ3TL54 Gm22166-201ENSMUST00000178419 121 ntBASIC1.08□□□□□ -2.24
Trim43aQ3TL54 Gm23288-201ENSMUST00000179213 121 ntBASIC1.08□□□□□ -2.24
Trim43aQ3TL54 Gm27385-201ENSMUST00000184747 104 ntBASIC1.08□□□□□ -2.24
Trim43aQ3TL54 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.08□□□□□ -2.24
Trim43aQ3TL54 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
Trim43aQ3TL54 Gm18296-201ENSMUST00000192475 783 ntBASIC1.08□□□□□ -2.24
Trim43aQ3TL54 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC1.08□□□□□ -2.24
Trim43aQ3TL54 Gm43035-201ENSMUST00000197626 517 ntBASIC1.08□□□□□ -2.24
Trim43aQ3TL54 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.08□□□□□ -2.24
Trim43aQ3TL54 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.08□□□□□ -2.24
Trim43aQ3TL54 Gm25128-201ENSMUST00000083339 76 ntBASIC1.08□□□□□ -2.24
Trim43aQ3TL54 Mir196b-201ENSMUST00000083509 85 ntBASIC1.08□□□□□ -2.24
Trim43aQ3TL54 Mir22-201ENSMUST00000083595 95 ntBASIC1.08□□□□□ -2.24
Trim43aQ3TL54 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
Trim43aQ3TL54 Snord71-201ENSMUST00000104361 85 ntBASIC1.07□□□□□ -2.24
Trim43aQ3TL54 Gm14355-201ENSMUST00000117352 264 ntBASIC1.07□□□□□ -2.24
Trim43aQ3TL54 Gm14937-201ENSMUST00000119709 208 ntBASIC1.07□□□□□ -2.24
Trim43aQ3TL54 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC1.07□□□□□ -2.24
Trim43aQ3TL54 Gm23212-201ENSMUST00000122718 60 ntBASIC1.07□□□□□ -2.24
Trim43aQ3TL54 Gm14364-201ENSMUST00000129209 267 ntBASIC1.07□□□□□ -2.24
Trim43aQ3TL54 Gm25054-201ENSMUST00000157370 97 ntBASIC1.07□□□□□ -2.24
Trim43aQ3TL54 Rnu7-201ENSMUST00000158458 62 ntBASIC1.07□□□□□ -2.24
Trim43aQ3TL54 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC1.07□□□□□ -2.24
Trim43aQ3TL54 Gm26501-201ENSMUST00000178307 107 ntBASIC1.07□□□□□ -2.24
Trim43aQ3TL54 Gm24390-201ENSMUST00000179578 62 ntBASIC1.07□□□□□ -2.24
Trim43aQ3TL54 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
Trim43aQ3TL54 Mir6380-201ENSMUST00000184334 81 ntBASIC1.07□□□□□ -2.24
Trim43aQ3TL54 Gm29005-201ENSMUST00000186773 320 ntBASIC1.07□□□□□ -2.24
Trim43aQ3TL54 Gm28912-201ENSMUST00000189001 234 ntBASIC1.07□□□□□ -2.24
Trim43aQ3TL54 Gm38280-201ENSMUST00000192610 158 ntBASIC1.07□□□□□ -2.24
Trim43aQ3TL54 Gm7495-201ENSMUST00000215099 426 ntBASIC1.07□□□□□ -2.24
Trim43aQ3TL54 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.07□□□□□ -2.24
Trim43aQ3TL54 AC132918.1-201ENSMUST00000227877 925 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 165.9 ms