Protein–RNA interactions for Protein: Q1W617

Shroom4, Protein Shroom4, mousemouse

Predictions only

Length 1,475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom4Q1W617 Gm44473-201ENSMUST00000204039 152 ntBASIC3.18□□□□□ -1.9
Shroom4Q1W617 AC150901.1-201ENSMUST00000208407 145 ntBASIC3.18□□□□□ -1.9
Shroom4Q1W617 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC3.18□□□□□ -1.9
Shroom4Q1W617 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC3.18□□□□□ -1.9
Shroom4Q1W617 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Shroom4Q1W617 Gm23422-201ENSMUST00000102000 107 ntBASIC3.17□□□□□ -1.9
Shroom4Q1W617 Gm25274-201ENSMUST00000104296 135 ntBASIC3.17□□□□□ -1.9
Shroom4Q1W617 Gm15002-201ENSMUST00000118406 452 ntBASIC3.17□□□□□ -1.9
Shroom4Q1W617 Gm13432-201ENSMUST00000118861 241 ntBASIC3.17□□□□□ -1.9
Shroom4Q1W617 Gm23887-201ENSMUST00000122683 172 ntBASIC3.17□□□□□ -1.9
Shroom4Q1W617 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC3.17□□□□□ -1.9
Shroom4Q1W617 Gm25664-201ENSMUST00000157697 107 ntBASIC3.17□□□□□ -1.9
Shroom4Q1W617 Gm26287-201ENSMUST00000158887 81 ntBASIC3.17□□□□□ -1.9
Shroom4Q1W617 Gm27233-201ENSMUST00000184030 307 ntBASIC3.17□□□□□ -1.9
Shroom4Q1W617 Gm28623-201ENSMUST00000187219 192 ntBASIC3.17□□□□□ -1.9
Shroom4Q1W617 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC3.17□□□□□ -1.9
Shroom4Q1W617 Gm34073-201ENSMUST00000195736 212 ntBASIC3.17□□□□□ -1.9
Shroom4Q1W617 Gm43239-201ENSMUST00000200131 201 ntBASIC3.17□□□□□ -1.9
Shroom4Q1W617 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Shroom4Q1W617 Gm9795-201ENSMUST00000062156 693 ntBASIC3.17□□□□□ -1.9
Shroom4Q1W617 Gm25814-201ENSMUST00000082754 107 ntBASIC3.17□□□□□ -1.9
Shroom4Q1W617 Gm22683-201ENSMUST00000082854 137 ntBASIC3.17□□□□□ -1.9
Shroom4Q1W617 Snord82-201ENSMUST00000082889 70 ntBASIC3.17□□□□□ -1.9
Shroom4Q1W617 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Shroom4Q1W617 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Shroom4Q1W617 Gm15896-201ENSMUST00000118045 440 ntBASIC3.16□□□□□ -1.9
Shroom4Q1W617 Gm11430-201ENSMUST00000121317 217 ntBASIC3.16□□□□□ -1.9
Shroom4Q1W617 Gm11819-201ENSMUST00000122192 372 ntBASIC3.16□□□□□ -1.9
Shroom4Q1W617 Gm26479-201ENSMUST00000122620 106 ntBASIC3.16□□□□□ -1.9
Shroom4Q1W617 Mir669k-201ENSMUST00000177742 127 ntBASIC3.16□□□□□ -1.9
Shroom4Q1W617 Gm25673-201ENSMUST00000179957 127 ntBASIC3.16□□□□□ -1.9
Shroom4Q1W617 Mir6346-201ENSMUST00000183982 81 ntBASIC3.16□□□□□ -1.9
Shroom4Q1W617 Gm45403-201ENSMUST00000209453 276 ntBASIC3.16□□□□□ -1.9
Shroom4Q1W617 Gm43047-201ENSMUST00000200089 3460 ntBASIC3.16□□□□□ -1.9
Shroom4Q1W617 n-R5s80-201ENSMUST00000122596 111 ntBASIC3.16□□□□□ -1.9
Shroom4Q1W617 Gm13901-201ENSMUST00000137252 468 ntBASIC3.16□□□□□ -1.9
Shroom4Q1W617 Gm25624-201ENSMUST00000157222 275 ntBASIC3.16□□□□□ -1.9
Shroom4Q1W617 Gm22943-201ENSMUST00000158564 76 ntBASIC3.16□□□□□ -1.9
Shroom4Q1W617 Gm23474-201ENSMUST00000158884 75 ntBASIC3.16□□□□□ -1.9
Shroom4Q1W617 Gm23921-201ENSMUST00000175258 107 ntBASIC3.16□□□□□ -1.9
Shroom4Q1W617 Gm26501-201ENSMUST00000178307 107 ntBASIC3.16□□□□□ -1.9
Shroom4Q1W617 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC3.16□□□□□ -1.9
Shroom4Q1W617 AC124772.1-201ENSMUST00000221325 151 ntBASIC3.16□□□□□ -1.9
Shroom4Q1W617 AC130821.1-201ENSMUST00000221997 293 ntBASIC3.16□□□□□ -1.9
Shroom4Q1W617 Gm22978-201ENSMUST00000082607 160 ntBASIC3.16□□□□□ -1.9
Shroom4Q1W617 Gm25930-201ENSMUST00000082785 107 ntBASIC3.16□□□□□ -1.9
Shroom4Q1W617 Mir181b-2-201ENSMUST00000083644 89 ntBASIC3.16□□□□□ -1.9
Shroom4Q1W617 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Shroom4Q1W617 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC3.15□□□□□ -1.91
Shroom4Q1W617 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC3.15□□□□□ -1.91
Shroom4Q1W617 Gm25015-201ENSMUST00000158400 128 ntBASIC3.15□□□□□ -1.91
Shroom4Q1W617 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC3.15□□□□□ -1.91
Shroom4Q1W617 Gm23967-201ENSMUST00000175062 78 ntBASIC3.15□□□□□ -1.91
Shroom4Q1W617 Gm23571-201ENSMUST00000180073 127 ntBASIC3.15□□□□□ -1.91
Shroom4Q1W617 Mir7661-201ENSMUST00000197023 61 ntBASIC3.15□□□□□ -1.91
Shroom4Q1W617 AC154276.2-201ENSMUST00000227707 309 ntBASIC3.15□□□□□ -1.91
Shroom4Q1W617 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
Shroom4Q1W617 Gm22003-201ENSMUST00000101885 107 ntBASIC3.14□□□□□ -1.91
Shroom4Q1W617 Gm15714-201ENSMUST00000117168 250 ntBASIC3.14□□□□□ -1.91
Shroom4Q1W617 Gm13541-201ENSMUST00000119519 283 ntBASIC3.14□□□□□ -1.91
Shroom4Q1W617 Gm22107-201ENSMUST00000122548 100 ntBASIC3.14□□□□□ -1.91
Shroom4Q1W617 Gm22328-201ENSMUST00000158074 112 ntBASIC3.14□□□□□ -1.91
Shroom4Q1W617 Gm24131-201ENSMUST00000158539 107 ntBASIC3.14□□□□□ -1.91
Shroom4Q1W617 Gm22756-201ENSMUST00000180118 107 ntBASIC3.14□□□□□ -1.91
Shroom4Q1W617 Mir7678-201ENSMUST00000185076 71 ntBASIC3.14□□□□□ -1.91
Shroom4Q1W617 Gm37431-201ENSMUST00000195102 111 ntBASIC3.14□□□□□ -1.91
Shroom4Q1W617 AC192091.2-201ENSMUST00000217869 117 ntBASIC3.14□□□□□ -1.91
Shroom4Q1W617 AC129202.2-201ENSMUST00000225123 177 ntBASIC3.14□□□□□ -1.91
Shroom4Q1W617 Gm26054-201ENSMUST00000083037 107 ntBASIC3.14□□□□□ -1.91
Shroom4Q1W617 Gm24492-201ENSMUST00000083798 107 ntBASIC3.14□□□□□ -1.91
Shroom4Q1W617 Gm45393-201ENSMUST00000211634 2631 ntBASIC3.14□□□□□ -1.91
Shroom4Q1W617 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Shroom4Q1W617 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC3.13□□□□□ -1.91
Shroom4Q1W617 Gm24132-201ENSMUST00000104745 91 ntBASIC3.13□□□□□ -1.91
Shroom4Q1W617 Gm23463-201ENSMUST00000122468 99 ntBASIC3.13□□□□□ -1.91
Shroom4Q1W617 Gm24085-201ENSMUST00000175172 116 ntBASIC3.13□□□□□ -1.91
Shroom4Q1W617 Gm24168-201ENSMUST00000178825 107 ntBASIC3.13□□□□□ -1.91
Shroom4Q1W617 Gm44720-201ENSMUST00000206076 260 ntBASIC3.13□□□□□ -1.91
Shroom4Q1W617 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Shroom4Q1W617 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Shroom4Q1W617 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Shroom4Q1W617 Gm23651-201ENSMUST00000116755 120 ntBASIC3.12□□□□□ -1.91
Shroom4Q1W617 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC3.12□□□□□ -1.91
Shroom4Q1W617 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC3.12□□□□□ -1.91
Shroom4Q1W617 AC158395.1-201ENSMUST00000227206 452 ntBASIC3.12□□□□□ -1.91
Shroom4Q1W617 Mir452-201ENSMUST00000093629 85 ntBASIC3.12□□□□□ -1.91
Shroom4Q1W617 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
Shroom4Q1W617 Gm44438-201ENSMUST00000204388 3236 ntBASIC3.11□□□□□ -1.91
Shroom4Q1W617 Mir701-201ENSMUST00000102208 109 ntBASIC3.11□□□□□ -1.91
Shroom4Q1W617 Mir301b-201ENSMUST00000102333 97 ntBASIC3.11□□□□□ -1.91
Shroom4Q1W617 Gm22784-201ENSMUST00000104088 132 ntBASIC3.11□□□□□ -1.91
Shroom4Q1W617 Gm24234-201ENSMUST00000104316 107 ntBASIC3.11□□□□□ -1.91
Shroom4Q1W617 Snord19-201ENSMUST00000104609 76 ntBASIC3.11□□□□□ -1.91
Shroom4Q1W617 Gm14868-201ENSMUST00000117840 216 ntBASIC3.11□□□□□ -1.91
Shroom4Q1W617 Gm24594-201ENSMUST00000122502 99 ntBASIC3.11□□□□□ -1.91
Shroom4Q1W617 Gm22984-201ENSMUST00000122751 122 ntBASIC3.11□□□□□ -1.91
Shroom4Q1W617 Gm23000-201ENSMUST00000157083 139 ntBASIC3.11□□□□□ -1.91
Shroom4Q1W617 Gm22766-201ENSMUST00000158372 99 ntBASIC3.11□□□□□ -1.91
Shroom4Q1W617 Gm28155-201ENSMUST00000191066 151 ntBASIC3.11□□□□□ -1.91
Shroom4Q1W617 Gm36946-201ENSMUST00000192706 435 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms