Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 AC153564.2-201ENSMUST00000219464 273 ntBASIC2.85□□□□□ -1.95
Col8a1Q00780 AC167669.1-201ENSMUST00000224932 384 ntBASIC2.85□□□□□ -1.95
Col8a1Q00780 AC122834.1-201ENSMUST00000227182 425 ntBASIC2.85□□□□□ -1.95
Col8a1Q00780 Gm10298-201ENSMUST00000074801 265 ntBASIC2.85□□□□□ -1.95
Col8a1Q00780 Gm22245-201ENSMUST00000082479 103 ntBASIC2.85□□□□□ -1.95
Col8a1Q00780 Gm22248-201ENSMUST00000082482 150 ntBASIC2.85□□□□□ -1.95
Col8a1Q00780 Gm22978-201ENSMUST00000082607 160 ntBASIC2.85□□□□□ -1.95
Col8a1Q00780 Gm25409-201ENSMUST00000083764 131 ntBASIC2.85□□□□□ -1.95
Col8a1Q00780 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Col8a1Q00780 Gm42909-201ENSMUST00000196982 3619 ntBASIC2.85□□□□□ -1.95
Col8a1Q00780 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Col8a1Q00780 Gm13756-201ENSMUST00000117618 222 ntBASIC2.84□□□□□ -1.95
Col8a1Q00780 Gm12723-201ENSMUST00000120700 451 ntBASIC2.84□□□□□ -1.95
Col8a1Q00780 Gm24650-201ENSMUST00000157105 103 ntBASIC2.84□□□□□ -1.95
Col8a1Q00780 Gm22322-201ENSMUST00000157151 111 ntBASIC2.84□□□□□ -1.95
Col8a1Q00780 Gm23589-201ENSMUST00000157660 105 ntBASIC2.84□□□□□ -1.95
Col8a1Q00780 Gm24958-201ENSMUST00000158009 97 ntBASIC2.84□□□□□ -1.95
Col8a1Q00780 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Col8a1Q00780 Mir6399-201ENSMUST00000184050 84 ntBASIC2.84□□□□□ -1.95
Col8a1Q00780 Trbv18-201ENSMUST00000194256 294 ntBASIC2.84□□□□□ -1.95
Col8a1Q00780 Trav5-2-201ENSMUST00000199855 280 ntBASIC2.84□□□□□ -1.95
Col8a1Q00780 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.84□□□□□ -1.95
Col8a1Q00780 Gm45687-201ENSMUST00000209454 155 ntBASIC2.84□□□□□ -1.95
Col8a1Q00780 Mir466-201ENSMUST00000093591 73 ntBASIC2.84□□□□□ -1.95
Col8a1Q00780 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Col8a1Q00780 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Col8a1Q00780 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.96
Col8a1Q00780 Gm14416-201ENSMUST00000118630 2308 ntBASIC2.84□□□□□ -1.96
Col8a1Q00780 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Col8a1Q00780 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Col8a1Q00780 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
Col8a1Q00780 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Col8a1Q00780 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Col8a1Q00780 Gm13761-201ENSMUST00000117238 807 ntBASIC2.83□□□□□ -1.96
Col8a1Q00780 Gm22957-201ENSMUST00000122511 123 ntBASIC2.83□□□□□ -1.96
Col8a1Q00780 Gm22664-201ENSMUST00000158719 105 ntBASIC2.83□□□□□ -1.96
Col8a1Q00780 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC2.83□□□□□ -1.96
Col8a1Q00780 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.83□□□□□ -1.96
Col8a1Q00780 AC134601.1-201ENSMUST00000221058 109 ntBASIC2.83□□□□□ -1.96
Col8a1Q00780 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.83□□□□□ -1.96
Col8a1Q00780 AC135292.1-201ENSMUST00000227665 204 ntBASIC2.83□□□□□ -1.96
Col8a1Q00780 Gm23303-201ENSMUST00000082714 152 ntBASIC2.83□□□□□ -1.96
Col8a1Q00780 AF357341-201ENSMUST00000083088 75 ntBASIC2.83□□□□□ -1.96
Col8a1Q00780 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Col8a1Q00780 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
Col8a1Q00780 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Col8a1Q00780 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Col8a1Q00780 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC2.82□□□□□ -1.96
Col8a1Q00780 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC2.82□□□□□ -1.96
Col8a1Q00780 Gm24096-201ENSMUST00000103905 110 ntBASIC2.82□□□□□ -1.96
Col8a1Q00780 Gm24119-201ENSMUST00000103979 246 ntBASIC2.82□□□□□ -1.96
Col8a1Q00780 Gm11460-201ENSMUST00000118200 361 ntBASIC2.82□□□□□ -1.96
Col8a1Q00780 Gm16186-201ENSMUST00000120132 216 ntBASIC2.82□□□□□ -1.96
Col8a1Q00780 Gm29613-201ENSMUST00000185846 313 ntBASIC2.82□□□□□ -1.96
Col8a1Q00780 Gm28650-201ENSMUST00000188413 411 ntBASIC2.82□□□□□ -1.96
Col8a1Q00780 Gm29544-201ENSMUST00000188860 313 ntBASIC2.82□□□□□ -1.96
Col8a1Q00780 Gm28808-201ENSMUST00000190978 313 ntBASIC2.82□□□□□ -1.96
Col8a1Q00780 Gm43521-201ENSMUST00000197838 255 ntBASIC2.82□□□□□ -1.96
Col8a1Q00780 Gm43107-201ENSMUST00000198729 255 ntBASIC2.82□□□□□ -1.96
Col8a1Q00780 Gm18000-201ENSMUST00000212153 800 ntBASIC2.82□□□□□ -1.96
Col8a1Q00780 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC2.82□□□□□ -1.96
Col8a1Q00780 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
Col8a1Q00780 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Col8a1Q00780 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Col8a1Q00780 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Col8a1Q00780 Gm26249-201ENSMUST00000116708 118 ntBASIC2.81□□□□□ -1.96
Col8a1Q00780 Gm13167-201ENSMUST00000118554 578 ntBASIC2.81□□□□□ -1.96
Col8a1Q00780 Gm15067-201ENSMUST00000119534 156 ntBASIC2.81□□□□□ -1.96
Col8a1Q00780 Gm6025-201ENSMUST00000121517 201 ntBASIC2.81□□□□□ -1.96
Col8a1Q00780 Gm23230-201ENSMUST00000157298 133 ntBASIC2.81□□□□□ -1.96
Col8a1Q00780 Gm22722-201ENSMUST00000157467 132 ntBASIC2.81□□□□□ -1.96
Col8a1Q00780 Gm22833-201ENSMUST00000158292 132 ntBASIC2.81□□□□□ -1.96
Col8a1Q00780 Gm25464-201ENSMUST00000175481 107 ntBASIC2.81□□□□□ -1.96
Col8a1Q00780 Mir3965-201ENSMUST00000175570 69 ntBASIC2.81□□□□□ -1.96
Col8a1Q00780 Gm28030-201ENSMUST00000184987 138 ntBASIC2.81□□□□□ -1.96
Col8a1Q00780 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC2.81□□□□□ -1.96
Col8a1Q00780 Gm26265-202ENSMUST00000196326 133 ntBASIC2.81□□□□□ -1.96
Col8a1Q00780 Gm24350-202ENSMUST00000198309 132 ntBASIC2.81□□□□□ -1.96
Col8a1Q00780 Gm44932-201ENSMUST00000206799 121 ntBASIC2.81□□□□□ -1.96
Col8a1Q00780 Gm30534-201ENSMUST00000217928 207 ntBASIC2.81□□□□□ -1.96
Col8a1Q00780 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.81□□□□□ -1.96
Col8a1Q00780 Mir186-201ENSMUST00000083497 71 ntBASIC2.81□□□□□ -1.96
Col8a1Q00780 Mir208a-201ENSMUST00000083498 83 ntBASIC2.81□□□□□ -1.96
Col8a1Q00780 Gm25684-201ENSMUST00000083941 107 ntBASIC2.81□□□□□ -1.96
Col8a1Q00780 AC158921.1-201ENSMUST00000227861 3468 ntBASIC2.81□□□□□ -1.96
Col8a1Q00780 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Col8a1Q00780 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Col8a1Q00780 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Col8a1Q00780 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC2.8□□□□□ -1.96
Col8a1Q00780 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Col8a1Q00780 Gm37158-201ENSMUST00000191652 5704 ntBASIC2.8□□□□□ -1.96
Col8a1Q00780 Gm26135-201ENSMUST00000101993 72 ntBASIC2.8□□□□□ -1.96
Col8a1Q00780 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC2.8□□□□□ -1.96
Col8a1Q00780 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Col8a1Q00780 Gm15190-201ENSMUST00000120855 276 ntBASIC2.8□□□□□ -1.96
Col8a1Q00780 Gm24892-201ENSMUST00000122747 104 ntBASIC2.8□□□□□ -1.96
Col8a1Q00780 Gm23234-201ENSMUST00000157304 134 ntBASIC2.8□□□□□ -1.96
Col8a1Q00780 Gm23101-201ENSMUST00000157550 137 ntBASIC2.8□□□□□ -1.96
Col8a1Q00780 Gm22070-201ENSMUST00000178475 107 ntBASIC2.8□□□□□ -1.96
Col8a1Q00780 Snord50b-201ENSMUST00000178497 72 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 119.9 ms