Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Snord80-202ENSMUST00000199023 77 ntBASIC2.95□□□□□ -1.94
Shmt1P50431 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC2.95□□□□□ -1.94
Shmt1P50431 Gm44922-201ENSMUST00000206690 90 ntBASIC2.95□□□□□ -1.94
Shmt1P50431 Gm45013-201ENSMUST00000206883 178 ntBASIC2.95□□□□□ -1.94
Shmt1P50431 Gm44966-201ENSMUST00000208096 157 ntBASIC2.95□□□□□ -1.94
Shmt1P50431 AC132615.1-201ENSMUST00000213873 255 ntBASIC2.95□□□□□ -1.94
Shmt1P50431 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC2.95□□□□□ -1.94
Shmt1P50431 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.95□□□□□ -1.94
Shmt1P50431 AC124182.1-201ENSMUST00000227091 321 ntBASIC2.95□□□□□ -1.94
Shmt1P50431 Gm10025-201ENSMUST00000079568 372 ntBASIC2.95□□□□□ -1.94
Shmt1P50431 Gm22970-201ENSMUST00000083304 186 ntBASIC2.95□□□□□ -1.94
Shmt1P50431 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Shmt1P50431 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Shmt1P50431 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Shmt1P50431 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Shmt1P50431 Snord14c-201ENSMUST00000101927 86 ntBASIC2.94□□□□□ -1.94
Shmt1P50431 Mir344c-201ENSMUST00000103919 92 ntBASIC2.94□□□□□ -1.94
Shmt1P50431 Gm25879-201ENSMUST00000104330 107 ntBASIC2.94□□□□□ -1.94
Shmt1P50431 Gm24586-201ENSMUST00000116695 89 ntBASIC2.94□□□□□ -1.94
Shmt1P50431 Gm26249-201ENSMUST00000116708 118 ntBASIC2.94□□□□□ -1.94
Shmt1P50431 Gm27396-201ENSMUST00000157708 58 ntBASIC2.94□□□□□ -1.94
Shmt1P50431 Gm23559-201ENSMUST00000157824 103 ntBASIC2.94□□□□□ -1.94
Shmt1P50431 Gm24681-201ENSMUST00000158760 107 ntBASIC2.94□□□□□ -1.94
Shmt1P50431 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Shmt1P50431 Gm22192-201ENSMUST00000175128 85 ntBASIC2.94□□□□□ -1.94
Shmt1P50431 Mir5136-201ENSMUST00000175573 76 ntBASIC2.94□□□□□ -1.94
Shmt1P50431 Mir3068-202ENSMUST00000197755 79 ntBASIC2.94□□□□□ -1.94
Shmt1P50431 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC2.94□□□□□ -1.94
Shmt1P50431 AC122834.1-201ENSMUST00000227182 425 ntBASIC2.94□□□□□ -1.94
Shmt1P50431 Gm25632-201ENSMUST00000083112 85 ntBASIC2.94□□□□□ -1.94
Shmt1P50431 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Shmt1P50431 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Shmt1P50431 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.94□□□□□ -1.94
Shmt1P50431 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.94□□□□□ -1.94
Shmt1P50431 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Shmt1P50431 Gm24122-201ENSMUST00000104107 132 ntBASIC2.93□□□□□ -1.94
Shmt1P50431 Gm14748-201ENSMUST00000119819 411 ntBASIC2.93□□□□□ -1.94
Shmt1P50431 Gm24053-201ENSMUST00000158620 105 ntBASIC2.93□□□□□ -1.94
Shmt1P50431 Mir3092-201ENSMUST00000174954 96 ntBASIC2.93□□□□□ -1.94
Shmt1P50431 CU062626.2-201ENSMUST00000223953 274 ntBASIC2.93□□□□□ -1.94
Shmt1P50431 AC122242.1-201ENSMUST00000224650 304 ntBASIC2.93□□□□□ -1.94
Shmt1P50431 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.93□□□□□ -1.94
Shmt1P50431 Snora19-201ENSMUST00000082962 132 ntBASIC2.93□□□□□ -1.94
Shmt1P50431 Gm23658-201ENSMUST00000083233 132 ntBASIC2.93□□□□□ -1.94
Shmt1P50431 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
Shmt1P50431 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Shmt1P50431 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Shmt1P50431 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Shmt1P50431 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Shmt1P50431 Gm44842-201ENSMUST00000209173 3372 ntBASIC2.92□□□□□ -1.94
Shmt1P50431 Gm23202-201ENSMUST00000104376 129 ntBASIC2.92□□□□□ -1.94
Shmt1P50431 Gm22674-201ENSMUST00000104413 131 ntBASIC2.92□□□□□ -1.94
Shmt1P50431 Gm14069-201ENSMUST00000120815 229 ntBASIC2.92□□□□□ -1.94
Shmt1P50431 Gm23476-201ENSMUST00000158881 274 ntBASIC2.92□□□□□ -1.94
Shmt1P50431 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Shmt1P50431 Mir6399-201ENSMUST00000184050 84 ntBASIC2.92□□□□□ -1.94
Shmt1P50431 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Shmt1P50431 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC2.92□□□□□ -1.94
Shmt1P50431 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.92□□□□□ -1.94
Shmt1P50431 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.92□□□□□ -1.94
Shmt1P50431 Gm34314-201ENSMUST00000203622 367 ntBASIC2.92□□□□□ -1.94
Shmt1P50431 AC150901.1-201ENSMUST00000208407 145 ntBASIC2.92□□□□□ -1.94
Shmt1P50431 Gm18991-201ENSMUST00000209225 746 ntBASIC2.92□□□□□ -1.94
Shmt1P50431 Gm19563-201ENSMUST00000222031 270 ntBASIC2.92□□□□□ -1.94
Shmt1P50431 Gm22507-201ENSMUST00000082773 160 ntBASIC2.92□□□□□ -1.94
Shmt1P50431 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Shmt1P50431 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
Shmt1P50431 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.92□□□□□ -1.94
Shmt1P50431 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.92□□□□□ -1.94
Shmt1P50431 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.92□□□□□ -1.94
Shmt1P50431 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.92□□□□□ -1.94
Shmt1P50431 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
Shmt1P50431 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Shmt1P50431 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Shmt1P50431 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Shmt1P50431 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Shmt1P50431 Gm9009-201ENSMUST00000117321 326 ntBASIC2.91□□□□□ -1.94
Shmt1P50431 Gm13797-201ENSMUST00000121792 120 ntBASIC2.91□□□□□ -1.94
Shmt1P50431 Gm25321-201ENSMUST00000122558 102 ntBASIC2.91□□□□□ -1.94
Shmt1P50431 Gm25985-201ENSMUST00000122677 107 ntBASIC2.91□□□□□ -1.94
Shmt1P50431 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC2.91□□□□□ -1.94
Shmt1P50431 Gm23642-201ENSMUST00000157858 258 ntBASIC2.91□□□□□ -1.94
Shmt1P50431 Gm25716-201ENSMUST00000158628 104 ntBASIC2.91□□□□□ -1.94
Shmt1P50431 Gm16111-201ENSMUST00000162128 285 ntBASIC2.91□□□□□ -1.94
Shmt1P50431 Mir7242-201ENSMUST00000183710 79 ntBASIC2.91□□□□□ -1.94
Shmt1P50431 Gm42739-201ENSMUST00000200687 226 ntBASIC2.91□□□□□ -1.94
Shmt1P50431 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC2.91□□□□□ -1.94
Shmt1P50431 AC192091.2-201ENSMUST00000217869 117 ntBASIC2.91□□□□□ -1.94
Shmt1P50431 AC124524.1-201ENSMUST00000225833 181 ntBASIC2.91□□□□□ -1.94
Shmt1P50431 AC161758.2-201ENSMUST00000228513 218 ntBASIC2.91□□□□□ -1.94
Shmt1P50431 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Shmt1P50431 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
Shmt1P50431 Gm23128-201ENSMUST00000104257 132 ntBASIC2.9□□□□□ -1.95
Shmt1P50431 Gm23895-201ENSMUST00000158108 160 ntBASIC2.9□□□□□ -1.95
Shmt1P50431 Mir7667-201ENSMUST00000183866 63 ntBASIC2.9□□□□□ -1.95
Shmt1P50431 Gm27921-201ENSMUST00000183968 108 ntBASIC2.9□□□□□ -1.95
Shmt1P50431 Gm20058-201ENSMUST00000186939 284 ntBASIC2.9□□□□□ -1.95
Shmt1P50431 Gm26265-202ENSMUST00000196326 133 ntBASIC2.9□□□□□ -1.95
Shmt1P50431 Gm23128-202ENSMUST00000196578 133 ntBASIC2.9□□□□□ -1.95
Shmt1P50431 Gm42623-201ENSMUST00000197225 379 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms