Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.65□□□□□ -1.99
Ercc3P49135 AC170600.1-201ENSMUST00000228763 277 ntBASIC2.65□□□□□ -1.99
Ercc3P49135 Gm24313-201ENSMUST00000082561 133 ntBASIC2.65□□□□□ -1.99
Ercc3P49135 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Ercc3P49135 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Ercc3P49135 Gm24598-201ENSMUST00000122510 74 ntBASIC2.64□□□□□ -1.99
Ercc3P49135 Mir1898-201ENSMUST00000122643 83 ntBASIC2.64□□□□□ -1.99
Ercc3P49135 Gm24837-201ENSMUST00000158683 81 ntBASIC2.64□□□□□ -1.99
Ercc3P49135 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC2.64□□□□□ -1.99
Ercc3P49135 Gm22114-201ENSMUST00000177756 107 ntBASIC2.64□□□□□ -1.99
Ercc3P49135 Gm24799-201ENSMUST00000178431 79 ntBASIC2.64□□□□□ -1.99
Ercc3P49135 Gm27878-201ENSMUST00000184000 106 ntBASIC2.64□□□□□ -1.99
Ercc3P49135 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC2.64□□□□□ -1.99
Ercc3P49135 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Ercc3P49135 Gm20923-201ENSMUST00000190009 319 ntBASIC2.64□□□□□ -1.99
Ercc3P49135 Gm21088-201ENSMUST00000190875 316 ntBASIC2.64□□□□□ -1.99
Ercc3P49135 Gm38019-201ENSMUST00000195133 380 ntBASIC2.64□□□□□ -1.99
Ercc3P49135 Mir1291-201ENSMUST00000199842 117 ntBASIC2.64□□□□□ -1.99
Ercc3P49135 Mir7217-201ENSMUST00000200304 62 ntBASIC2.64□□□□□ -1.99
Ercc3P49135 Gm45616-201ENSMUST00000211711 319 ntBASIC2.64□□□□□ -1.99
Ercc3P49135 AC154552.1-201ENSMUST00000222969 202 ntBASIC2.64□□□□□ -1.99
Ercc3P49135 AC100209.2-201ENSMUST00000224461 451 ntBASIC2.64□□□□□ -1.99
Ercc3P49135 Gm25130-201ENSMUST00000082650 156 ntBASIC2.64□□□□□ -1.99
Ercc3P49135 Snora34-201ENSMUST00000083402 138 ntBASIC2.64□□□□□ -1.99
Ercc3P49135 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC2.64□□□□□ -1.99
Ercc3P49135 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC2.64□□□□□ -1.99
Ercc3P49135 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.64□□□□□ -1.99
Ercc3P49135 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.63□□□□□ -1.99
Ercc3P49135 Gm12647-201ENSMUST00000118977 265 ntBASIC2.63□□□□□ -1.99
Ercc3P49135 Gm24896-201ENSMUST00000122741 135 ntBASIC2.63□□□□□ -1.99
Ercc3P49135 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC2.63□□□□□ -1.99
Ercc3P49135 Gm22448-201ENSMUST00000179254 107 ntBASIC2.63□□□□□ -1.99
Ercc3P49135 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC2.63□□□□□ -1.99
Ercc3P49135 Gm28724-201ENSMUST00000186149 625 ntBASIC2.63□□□□□ -1.99
Ercc3P49135 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.63□□□□□ -1.99
Ercc3P49135 Gm23679-201ENSMUST00000083161 119 ntBASIC2.63□□□□□ -1.99
Ercc3P49135 Gm25124-201ENSMUST00000083345 164 ntBASIC2.63□□□□□ -1.99
Ercc3P49135 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Ercc3P49135 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Ercc3P49135 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Ercc3P49135 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.63□□□□□ -1.99
Ercc3P49135 Gm42536-201ENSMUST00000197562 1613 ntBASIC2.62□□□□□ -1.99
Ercc3P49135 Gm25111-201ENSMUST00000116686 147 ntBASIC2.62□□□□□ -1.99
Ercc3P49135 Gm25315-201ENSMUST00000116823 121 ntBASIC2.62□□□□□ -1.99
Ercc3P49135 Gm13432-201ENSMUST00000118861 241 ntBASIC2.62□□□□□ -1.99
Ercc3P49135 Gm13711-201ENSMUST00000119708 453 ntBASIC2.62□□□□□ -1.99
Ercc3P49135 Gm23642-201ENSMUST00000157858 258 ntBASIC2.62□□□□□ -1.99
Ercc3P49135 Gm26157-201ENSMUST00000158974 126 ntBASIC2.62□□□□□ -1.99
Ercc3P49135 Gm23921-201ENSMUST00000175258 107 ntBASIC2.62□□□□□ -1.99
Ercc3P49135 Gm29665-201ENSMUST00000191457 528 ntBASIC2.62□□□□□ -1.99
Ercc3P49135 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC2.62□□□□□ -1.99
Ercc3P49135 Mir7661-201ENSMUST00000197023 61 ntBASIC2.62□□□□□ -1.99
Ercc3P49135 Gm44482-201ENSMUST00000199232 103 ntBASIC2.62□□□□□ -1.99
Ercc3P49135 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC2.62□□□□□ -1.99
Ercc3P49135 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Ercc3P49135 Gm24661-201ENSMUST00000083205 104 ntBASIC2.62□□□□□ -1.99
Ercc3P49135 Gm25793-201ENSMUST00000083287 107 ntBASIC2.62□□□□□ -1.99
Ercc3P49135 Gm15101-201ENSMUST00000178818 1502 ntBASIC2.62□□□□□ -1.99
Ercc3P49135 Gm10033-201ENSMUST00000072427 1813 ntBASIC2.61□□□□□ -1.99
Ercc3P49135 Mir344e-201ENSMUST00000104677 66 ntBASIC2.61□□□□□ -1.99
Ercc3P49135 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Ercc3P49135 Mir1b-201ENSMUST00000117012 122 ntBASIC2.61□□□□□ -1.99
Ercc3P49135 Gm14803-201ENSMUST00000117163 361 ntBASIC2.61□□□□□ -1.99
Ercc3P49135 Gm12351-201ENSMUST00000118727 292 ntBASIC2.61□□□□□ -1.99
Ercc3P49135 Gm14748-201ENSMUST00000119819 411 ntBASIC2.61□□□□□ -1.99
Ercc3P49135 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC2.61□□□□□ -1.99
Ercc3P49135 Gm22264-201ENSMUST00000178200 107 ntBASIC2.61□□□□□ -1.99
Ercc3P49135 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC2.61□□□□□ -1.99
Ercc3P49135 Gm23625-201ENSMUST00000082457 100 ntBASIC2.61□□□□□ -1.99
Ercc3P49135 Mir29c-201ENSMUST00000083614 88 ntBASIC2.61□□□□□ -1.99
Ercc3P49135 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.6□□□□□ -1.99
Ercc3P49135 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Ercc3P49135 Gm24907-201ENSMUST00000116932 128 ntBASIC2.6□□□□□ -1.99
Ercc3P49135 Gm14001-201ENSMUST00000118847 247 ntBASIC2.6□□□□□ -1.99
Ercc3P49135 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Ercc3P49135 Gm23983-201ENSMUST00000157142 114 ntBASIC2.6□□□□□ -1.99
Ercc3P49135 Gm23324-201ENSMUST00000157421 131 ntBASIC2.6□□□□□ -1.99
Ercc3P49135 Gm24847-201ENSMUST00000158032 108 ntBASIC2.6□□□□□ -1.99
Ercc3P49135 Gm22447-201ENSMUST00000158155 92 ntBASIC2.6□□□□□ -1.99
Ercc3P49135 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.6□□□□□ -1.99
Ercc3P49135 Gm43250-201ENSMUST00000196536 273 ntBASIC2.6□□□□□ -1.99
Ercc3P49135 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Ercc3P49135 Gm25788-201ENSMUST00000082721 131 ntBASIC2.6□□□□□ -1.99
Ercc3P49135 Mir32-201ENSMUST00000083610 70 ntBASIC2.6□□□□□ -1.99
Ercc3P49135 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
Ercc3P49135 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
Ercc3P49135 Gm26249-201ENSMUST00000116708 118 ntBASIC2.59□□□□□ -1.99
Ercc3P49135 Gm11862-201ENSMUST00000119678 659 ntBASIC2.59□□□□□ -1.99
Ercc3P49135 Gm13433-201ENSMUST00000121701 240 ntBASIC2.59□□□□□ -1.99
Ercc3P49135 Gm8121-201ENSMUST00000153583 499 ntBASIC2.59□□□□□ -1.99
Ercc3P49135 Gm22159-201ENSMUST00000158412 130 ntBASIC2.59□□□□□ -1.99
Ercc3P49135 Gm28058-201ENSMUST00000186421 264 ntBASIC2.59□□□□□ -1.99
Ercc3P49135 Gm29147-201ENSMUST00000186846 315 ntBASIC2.59□□□□□ -1.99
Ercc3P49135 Gm29227-201ENSMUST00000187139 315 ntBASIC2.59□□□□□ -1.99
Ercc3P49135 Gm29034-201ENSMUST00000188099 315 ntBASIC2.59□□□□□ -1.99
Ercc3P49135 Gm28160-201ENSMUST00000191229 315 ntBASIC2.59□□□□□ -1.99
Ercc3P49135 Gm37129-201ENSMUST00000195791 315 ntBASIC2.59□□□□□ -1.99
Ercc3P49135 Gm3724-201ENSMUST00000197957 349 ntBASIC2.59□□□□□ -1.99
Ercc3P49135 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC2.59□□□□□ -1.99
Ercc3P49135 Gm18617-201ENSMUST00000222311 259 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms