Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm25081-201ENSMUST00000082534 108 ntBASIC3.68□□□□□ -1.82
Rfx1P48377 Mir101b-201ENSMUST00000083622 97 ntBASIC3.68□□□□□ -1.82
Rfx1P48377 Gm43046-201ENSMUST00000198771 2451 ntBASIC3.68□□□□□ -1.82
Rfx1P48377 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC3.68□□□□□ -1.82
Rfx1P48377 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.67□□□□□ -1.82
Rfx1P48377 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.67□□□□□ -1.82
Rfx1P48377 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
Rfx1P48377 Gm22497-201ENSMUST00000104499 131 ntBASIC3.67□□□□□ -1.82
Rfx1P48377 Gm11471-201ENSMUST00000121824 198 ntBASIC3.67□□□□□ -1.82
Rfx1P48377 Gm23101-201ENSMUST00000157550 137 ntBASIC3.67□□□□□ -1.82
Rfx1P48377 Gm22553-201ENSMUST00000157797 295 ntBASIC3.67□□□□□ -1.82
Rfx1P48377 Mir1934-201ENSMUST00000158127 83 ntBASIC3.67□□□□□ -1.82
Rfx1P48377 Gm25066-201ENSMUST00000158145 123 ntBASIC3.67□□□□□ -1.82
Rfx1P48377 Gm23182-201ENSMUST00000158688 135 ntBASIC3.67□□□□□ -1.82
Rfx1P48377 Mir8096-201ENSMUST00000184526 127 ntBASIC3.67□□□□□ -1.82
Rfx1P48377 Gm28344-201ENSMUST00000185704 279 ntBASIC3.67□□□□□ -1.82
Rfx1P48377 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC3.67□□□□□ -1.82
Rfx1P48377 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.67□□□□□ -1.82
Rfx1P48377 Gm46993-201ENSMUST00000220708 259 ntBASIC3.67□□□□□ -1.82
Rfx1P48377 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Rfx1P48377 AC124182.1-201ENSMUST00000227091 321 ntBASIC3.67□□□□□ -1.82
Rfx1P48377 Gm23738-201ENSMUST00000082828 171 ntBASIC3.67□□□□□ -1.82
Rfx1P48377 Mir340-201ENSMUST00000083483 98 ntBASIC3.67□□□□□ -1.82
Rfx1P48377 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC3.67□□□□□ -1.82
Rfx1P48377 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Rfx1P48377 Gm22051-201ENSMUST00000117002 127 ntBASIC3.66□□□□□ -1.82
Rfx1P48377 Mir466b-1-201ENSMUST00000177988 82 ntBASIC3.66□□□□□ -1.82
Rfx1P48377 Gm6060-201ENSMUST00000188671 251 ntBASIC3.66□□□□□ -1.82
Rfx1P48377 Gm34139-201ENSMUST00000196166 294 ntBASIC3.66□□□□□ -1.82
Rfx1P48377 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC3.66□□□□□ -1.82
Rfx1P48377 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Rfx1P48377 Gm23925-201ENSMUST00000082471 132 ntBASIC3.66□□□□□ -1.82
Rfx1P48377 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.66□□□□□ -1.82
Rfx1P48377 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Rfx1P48377 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
Rfx1P48377 Gm38162-201ENSMUST00000195562 4597 ntBASIC3.65□□□□□ -1.82
Rfx1P48377 Gm6954-201ENSMUST00000117416 225 ntBASIC3.65□□□□□ -1.83
Rfx1P48377 Gm25985-201ENSMUST00000122677 107 ntBASIC3.65□□□□□ -1.83
Rfx1P48377 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Rfx1P48377 Gm22075-201ENSMUST00000158599 192 ntBASIC3.65□□□□□ -1.83
Rfx1P48377 Gm37104-201ENSMUST00000193278 196 ntBASIC3.65□□□□□ -1.83
Rfx1P48377 Gm6105-201ENSMUST00000200580 624 ntBASIC3.65□□□□□ -1.83
Rfx1P48377 Gm45080-201ENSMUST00000206648 283 ntBASIC3.65□□□□□ -1.83
Rfx1P48377 Gm21007-201ENSMUST00000221024 326 ntBASIC3.65□□□□□ -1.83
Rfx1P48377 Gm24147-201ENSMUST00000082763 144 ntBASIC3.65□□□□□ -1.83
Rfx1P48377 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
Rfx1P48377 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.64□□□□□ -1.83
Rfx1P48377 Gm23175-201ENSMUST00000104371 132 ntBASIC3.64□□□□□ -1.83
Rfx1P48377 Gm14843-201ENSMUST00000119596 212 ntBASIC3.64□□□□□ -1.83
Rfx1P48377 Gm14748-201ENSMUST00000119819 411 ntBASIC3.64□□□□□ -1.83
Rfx1P48377 Gm25267-201ENSMUST00000158522 63 ntBASIC3.64□□□□□ -1.83
Rfx1P48377 Gm24131-201ENSMUST00000158539 107 ntBASIC3.64□□□□□ -1.83
Rfx1P48377 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Rfx1P48377 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
Rfx1P48377 Mir7578-201ENSMUST00000183455 82 ntBASIC3.64□□□□□ -1.83
Rfx1P48377 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC3.64□□□□□ -1.83
Rfx1P48377 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.64□□□□□ -1.83
Rfx1P48377 Gm44666-201ENSMUST00000208544 391 ntBASIC3.64□□□□□ -1.83
Rfx1P48377 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC3.64□□□□□ -1.83
Rfx1P48377 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.64□□□□□ -1.83
Rfx1P48377 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Rfx1P48377 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Rfx1P48377 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Rfx1P48377 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.63□□□□□ -1.83
Rfx1P48377 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Rfx1P48377 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Rfx1P48377 Mir374b-201ENSMUST00000102314 95 ntBASIC3.63□□□□□ -1.83
Rfx1P48377 Gm23391-201ENSMUST00000157579 104 ntBASIC3.63□□□□□ -1.83
Rfx1P48377 Gm23858-201ENSMUST00000158384 106 ntBASIC3.63□□□□□ -1.83
Rfx1P48377 Mir28b-201ENSMUST00000175399 80 ntBASIC3.63□□□□□ -1.83
Rfx1P48377 Mir3106-201ENSMUST00000175401 82 ntBASIC3.63□□□□□ -1.83
Rfx1P48377 Gm27893-201ENSMUST00000184408 194 ntBASIC3.63□□□□□ -1.83
Rfx1P48377 Gm6003-201ENSMUST00000187903 463 ntBASIC3.63□□□□□ -1.83
Rfx1P48377 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC3.63□□□□□ -1.83
Rfx1P48377 Gm44482-201ENSMUST00000199232 103 ntBASIC3.63□□□□□ -1.83
Rfx1P48377 Gm43749-201ENSMUST00000199345 352 ntBASIC3.63□□□□□ -1.83
Rfx1P48377 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Rfx1P48377 Gm43264-201ENSMUST00000202284 325 ntBASIC3.63□□□□□ -1.83
Rfx1P48377 Gm44256-201ENSMUST00000203304 335 ntBASIC3.63□□□□□ -1.83
Rfx1P48377 AC183096.2-201ENSMUST00000228733 457 ntBASIC3.63□□□□□ -1.83
Rfx1P48377 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Rfx1P48377 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Rfx1P48377 Gm24598-201ENSMUST00000122510 74 ntBASIC3.62□□□□□ -1.83
Rfx1P48377 Gm16404-201ENSMUST00000177739 468 ntBASIC3.62□□□□□ -1.83
Rfx1P48377 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC3.62□□□□□ -1.83
Rfx1P48377 Gm14598-201ENSMUST00000180109 468 ntBASIC3.62□□□□□ -1.83
Rfx1P48377 Gm14625-201ENSMUST00000180231 468 ntBASIC3.62□□□□□ -1.83
Rfx1P48377 Gm44182-201ENSMUST00000204052 115 ntBASIC3.62□□□□□ -1.83
Rfx1P48377 Gm9712-201ENSMUST00000210842 311 ntBASIC3.62□□□□□ -1.83
Rfx1P48377 AC192091.2-201ENSMUST00000217869 117 ntBASIC3.62□□□□□ -1.83
Rfx1P48377 Gm25124-201ENSMUST00000083345 164 ntBASIC3.62□□□□□ -1.83
Rfx1P48377 Mir184-201ENSMUST00000083662 69 ntBASIC3.62□□□□□ -1.83
Rfx1P48377 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Rfx1P48377 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Rfx1P48377 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
Rfx1P48377 Mir673-201ENSMUST00000102361 91 ntBASIC3.61□□□□□ -1.83
Rfx1P48377 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.61□□□□□ -1.83
Rfx1P48377 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.61□□□□□ -1.83
Rfx1P48377 Gm22221-201ENSMUST00000157362 103 ntBASIC3.61□□□□□ -1.83
Rfx1P48377 Gm25425-201ENSMUST00000157611 96 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 126.9 ms