Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm28481-201ENSMUST00000189231 315 ntBASIC0.69□□□□□ -2.3
Cdx2P43241 Gm28861-201ENSMUST00000189681 315 ntBASIC0.69□□□□□ -2.3
Cdx2P43241 Gm28717-201ENSMUST00000189950 315 ntBASIC0.69□□□□□ -2.3
Cdx2P43241 Gm29180-201ENSMUST00000190003 315 ntBASIC0.69□□□□□ -2.3
Cdx2P43241 Gm29575-201ENSMUST00000190597 315 ntBASIC0.69□□□□□ -2.3
Cdx2P43241 Gm29631-201ENSMUST00000191065 315 ntBASIC0.69□□□□□ -2.3
Cdx2P43241 Gm28160-201ENSMUST00000191229 315 ntBASIC0.69□□□□□ -2.3
Cdx2P43241 Gm29469-201ENSMUST00000191448 315 ntBASIC0.69□□□□□ -2.3
Cdx2P43241 Gm29059-201ENSMUST00000191534 315 ntBASIC0.69□□□□□ -2.3
Cdx2P43241 Gm37765-201ENSMUST00000192395 315 ntBASIC0.69□□□□□ -2.3
Cdx2P43241 Gm37658-201ENSMUST00000192672 315 ntBASIC0.69□□□□□ -2.3
Cdx2P43241 Gm37237-201ENSMUST00000192893 315 ntBASIC0.69□□□□□ -2.3
Cdx2P43241 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC0.69□□□□□ -2.3
Cdx2P43241 Gm37997-201ENSMUST00000193515 267 ntBASIC0.69□□□□□ -2.3
Cdx2P43241 Gm36968-201ENSMUST00000193737 315 ntBASIC0.69□□□□□ -2.3
Cdx2P43241 Gm38290-201ENSMUST00000195238 315 ntBASIC0.69□□□□□ -2.3
Cdx2P43241 Gm37129-201ENSMUST00000195791 315 ntBASIC0.69□□□□□ -2.3
Cdx2P43241 Gm44392-201ENSMUST00000196758 115 ntBASIC0.69□□□□□ -2.3
Cdx2P43241 Gm7495-201ENSMUST00000215099 426 ntBASIC0.69□□□□□ -2.3
Cdx2P43241 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC0.69□□□□□ -2.3
Cdx2P43241 AC156560.1-201ENSMUST00000221425 256 ntBASIC0.69□□□□□ -2.3
Cdx2P43241 AC124569.4-201ENSMUST00000223830 1220 ntBASIC0.69□□□□□ -2.3
Cdx2P43241 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
Cdx2P43241 Gm23735-201ENSMUST00000082551 134 ntBASIC0.69□□□□□ -2.3
Cdx2P43241 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC0.69□□□□□ -2.3
Cdx2P43241 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
Cdx2P43241 Gm24282-201ENSMUST00000104232 66 ntBASIC0.68□□□□□ -2.3
Cdx2P43241 Gm15061-201ENSMUST00000121076 1046 ntBASIC0.68□□□□□ -2.3
Cdx2P43241 Gm14638-201ENSMUST00000121338 216 ntBASIC0.68□□□□□ -2.3
Cdx2P43241 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.68□□□□□ -2.3
Cdx2P43241 Gm24111-201ENSMUST00000175491 97 ntBASIC0.68□□□□□ -2.3
Cdx2P43241 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC0.68□□□□□ -2.3
Cdx2P43241 Gm27421-201ENSMUST00000184729 167 ntBASIC0.68□□□□□ -2.3
Cdx2P43241 Gm38113-201ENSMUST00000193704 201 ntBASIC0.68□□□□□ -2.3
Cdx2P43241 AC168056.1-201ENSMUST00000225270 180 ntBASIC0.68□□□□□ -2.3
Cdx2P43241 AC124426.1-203ENSMUST00000221814 1362 ntBASIC0.68□□□□□ -2.3
Cdx2P43241 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC0.67□□□□□ -2.3
Cdx2P43241 Gm23390-201ENSMUST00000157393 106 ntBASIC0.67□□□□□ -2.3
Cdx2P43241 Gm24288-201ENSMUST00000157630 144 ntBASIC0.67□□□□□ -2.3
Cdx2P43241 Gm25371-201ENSMUST00000158162 101 ntBASIC0.67□□□□□ -2.3
Cdx2P43241 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC0.67□□□□□ -2.3
Cdx2P43241 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC0.67□□□□□ -2.3
Cdx2P43241 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC0.67□□□□□ -2.3
Cdx2P43241 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC0.67□□□□□ -2.3
Cdx2P43241 Gm34073-201ENSMUST00000195736 212 ntBASIC0.67□□□□□ -2.3
Cdx2P43241 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC0.67□□□□□ -2.3
Cdx2P43241 AC126267.1-201ENSMUST00000214282 284 ntBASIC0.67□□□□□ -2.3
Cdx2P43241 Gm40810-201ENSMUST00000219149 253 ntBASIC0.67□□□□□ -2.3
Cdx2P43241 Gm9973-202ENSMUST00000220926 166 ntBASIC0.67□□□□□ -2.3
Cdx2P43241 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC0.66□□□□□ -2.3
Cdx2P43241 Gm26074-201ENSMUST00000104063 129 ntBASIC0.66□□□□□ -2.3
Cdx2P43241 Gm14980-201ENSMUST00000121247 736 ntBASIC0.66□□□□□ -2.3
Cdx2P43241 Gm23419-201ENSMUST00000175523 84 ntBASIC0.66□□□□□ -2.3
Cdx2P43241 Gm19901-201ENSMUST00000192191 495 ntBASIC0.66□□□□□ -2.3
Cdx2P43241 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC0.66□□□□□ -2.3
Cdx2P43241 Gm5010-201ENSMUST00000213131 260 ntBASIC0.66□□□□□ -2.3
Cdx2P43241 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC0.66□□□□□ -2.3
Cdx2P43241 AC123709.1-201ENSMUST00000224848 345 ntBASIC0.66□□□□□ -2.3
Cdx2P43241 Mir350-201ENSMUST00000083639 99 ntBASIC0.66□□□□□ -2.3
Cdx2P43241 Spanxn4-201ENSMUST00000172433 424 ntBASIC0.65□□□□□ -2.31
Cdx2P43241 Gm20386-201ENSMUST00000174010 132 ntBASIC0.65□□□□□ -2.31
Cdx2P43241 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.65□□□□□ -2.31
Cdx2P43241 Gm18396-201ENSMUST00000177095 361 ntBASIC0.65□□□□□ -2.31
Cdx2P43241 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC0.65□□□□□ -2.31
Cdx2P43241 Gm9830-201ENSMUST00000178509 357 ntBASIC0.65□□□□□ -2.31
Cdx2P43241 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC0.65□□□□□ -2.31
Cdx2P43241 Gm29661-201ENSMUST00000186781 315 ntBASIC0.65□□□□□ -2.31
Cdx2P43241 Gm29308-201ENSMUST00000188863 315 ntBASIC0.65□□□□□ -2.31
Cdx2P43241 Gm43602-201ENSMUST00000196772 300 ntBASIC0.65□□□□□ -2.31
Cdx2P43241 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC0.65□□□□□ -2.31
Cdx2P43241 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
Cdx2P43241 Gm5899-201ENSMUST00000071770 270 ntBASIC0.65□□□□□ -2.31
Cdx2P43241 Gm22233-201ENSMUST00000157464 114 ntBASIC0.64□□□□□ -2.31
Cdx2P43241 Gm25868-201ENSMUST00000158253 114 ntBASIC0.64□□□□□ -2.31
Cdx2P43241 Gm23777-201ENSMUST00000158994 259 ntBASIC0.64□□□□□ -2.31
Cdx2P43241 Gm16038-201ENSMUST00000159317 193 ntBASIC0.64□□□□□ -2.31
Cdx2P43241 Gm26285-201ENSMUST00000177923 107 ntBASIC0.64□□□□□ -2.31
Cdx2P43241 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.64□□□□□ -2.31
Cdx2P43241 AC116465.1-201ENSMUST00000220324 235 ntBASIC0.64□□□□□ -2.31
Cdx2P43241 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC0.64□□□□□ -2.31
Cdx2P43241 Gm23622-201ENSMUST00000082460 107 ntBASIC0.64□□□□□ -2.31
Cdx2P43241 Gm24258-201ENSMUST00000083739 133 ntBASIC0.64□□□□□ -2.31
Cdx2P43241 Snord35a-201ENSMUST00000083884 90 ntBASIC0.64□□□□□ -2.31
Cdx2P43241 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
Cdx2P43241 Gm23605-201ENSMUST00000157255 127 ntBASIC0.63□□□□□ -2.31
Cdx2P43241 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
Cdx2P43241 Mir3061-201ENSMUST00000175129 91 ntBASIC0.63□□□□□ -2.31
Cdx2P43241 Gm21815-201ENSMUST00000178213 664 ntBASIC0.63□□□□□ -2.31
Cdx2P43241 Gm20874-201ENSMUST00000178356 663 ntBASIC0.63□□□□□ -2.31
Cdx2P43241 Gm27490-201ENSMUST00000184754 128 ntBASIC0.63□□□□□ -2.31
Cdx2P43241 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC0.63□□□□□ -2.31
Cdx2P43241 AC164629.1-201ENSMUST00000220250 1113 ntBASIC0.63□□□□□ -2.31
Cdx2P43241 AC167669.4-201ENSMUST00000225967 140 ntBASIC0.63□□□□□ -2.31
Cdx2P43241 AC122834.1-201ENSMUST00000227182 425 ntBASIC0.63□□□□□ -2.31
Cdx2P43241 AC102291.2-201ENSMUST00000228083 367 ntBASIC0.63□□□□□ -2.31
Cdx2P43241 Gm26224-201ENSMUST00000082506 80 ntBASIC0.63□□□□□ -2.31
Cdx2P43241 Gm24921-201ENSMUST00000083024 107 ntBASIC0.63□□□□□ -2.31
Cdx2P43241 Gm13396-201ENSMUST00000120617 271 ntBASIC0.62□□□□□ -2.31
Cdx2P43241 Gm16265-201ENSMUST00000134558 108 ntBASIC0.62□□□□□ -2.31
Cdx2P43241 Gm22340-201ENSMUST00000157717 114 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 188.8 ms