Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm43602-201ENSMUST00000196772 300 ntBASIC-0.45□□□□□ -2.48
HttP42859 AC124772.1-201ENSMUST00000221325 151 ntBASIC-0.45□□□□□ -2.48
HttP42859 Gm22421-201ENSMUST00000083058 107 ntBASIC-0.45□□□□□ -2.48
HttP42859 Gm24928-201ENSMUST00000083399 107 ntBASIC-0.45□□□□□ -2.48
HttP42859 Gm14657-201ENSMUST00000117461 302 ntBASIC-0.46□□□□□ -2.48
HttP42859 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC-0.46□□□□□ -2.48
HttP42859 Gm44488-201ENSMUST00000199467 119 ntBASIC-0.46□□□□□ -2.48
HttP42859 Gm44615-201ENSMUST00000206548 358 ntBASIC-0.46□□□□□ -2.48
HttP42859 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.46□□□□□ -2.48
HttP42859 Gm13731-201ENSMUST00000117332 196 ntBASIC-0.46□□□□□ -2.48
HttP42859 Gm16242-201ENSMUST00000117741 334 ntBASIC-0.46□□□□□ -2.48
HttP42859 Gm12370-201ENSMUST00000117809 604 ntBASIC-0.46□□□□□ -2.48
HttP42859 Gm13396-201ENSMUST00000120617 271 ntBASIC-0.46□□□□□ -2.48
HttP42859 Gm24851-201ENSMUST00000158028 103 ntBASIC-0.46□□□□□ -2.48
HttP42859 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC-0.46□□□□□ -2.48
HttP42859 Gm37089-201ENSMUST00000195616 129 ntBASIC-0.46□□□□□ -2.48
HttP42859 AC125531.1-201ENSMUST00000219849 221 ntBASIC-0.46□□□□□ -2.48
HttP42859 Gm26274-201ENSMUST00000157103 321 ntBASIC-0.47□□□□□ -2.48
HttP42859 Gm24056-201ENSMUST00000158617 146 ntBASIC-0.47□□□□□ -2.48
HttP42859 Ighv1-6-201ENSMUST00000193849 293 ntBASIC-0.47□□□□□ -2.48
HttP42859 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC-0.47□□□□□ -2.48
HttP42859 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC-0.47□□□□□ -2.48
HttP42859 Gm24948-201ENSMUST00000082866 207 ntBASIC-0.47□□□□□ -2.48
HttP42859 Gm30738-201ENSMUST00000221346 502 ntBASIC-0.47□□□□□ -2.48
HttP42859 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC-0.47□□□□□ -2.48
HttP42859 Snord116l9-201ENSMUST00000101891 94 ntBASIC-0.47□□□□□ -2.49
HttP42859 Gm26504-201ENSMUST00000102033 94 ntBASIC-0.47□□□□□ -2.49
HttP42859 Gm14947-201ENSMUST00000133704 303 ntBASIC-0.47□□□□□ -2.49
HttP42859 Gm26502-201ENSMUST00000177732 94 ntBASIC-0.47□□□□□ -2.49
HttP42859 Snord116l13-201ENSMUST00000177737 94 ntBASIC-0.47□□□□□ -2.49
HttP42859 Gm25350-201ENSMUST00000177849 94 ntBASIC-0.47□□□□□ -2.49
HttP42859 Snord116l15-201ENSMUST00000177940 94 ntBASIC-0.47□□□□□ -2.49
HttP42859 Gm23446-201ENSMUST00000177977 94 ntBASIC-0.47□□□□□ -2.49
HttP42859 Snord116l4-201ENSMUST00000177982 94 ntBASIC-0.47□□□□□ -2.49
HttP42859 Gm26201-201ENSMUST00000178047 94 ntBASIC-0.47□□□□□ -2.49
HttP42859 Gm24711-201ENSMUST00000178062 94 ntBASIC-0.47□□□□□ -2.49
HttP42859 Gm24609-201ENSMUST00000178166 94 ntBASIC-0.47□□□□□ -2.49
HttP42859 Gm23265-201ENSMUST00000178321 94 ntBASIC-0.47□□□□□ -2.49
HttP42859 Gm22812-201ENSMUST00000178329 94 ntBASIC-0.47□□□□□ -2.49
HttP42859 Snord116l3-201ENSMUST00000178370 94 ntBASIC-0.47□□□□□ -2.49
HttP42859 Gm26246-201ENSMUST00000178388 94 ntBASIC-0.47□□□□□ -2.49
HttP42859 Gm25155-201ENSMUST00000178450 94 ntBASIC-0.47□□□□□ -2.49
HttP42859 Gm24760-201ENSMUST00000178530 94 ntBASIC-0.47□□□□□ -2.49
HttP42859 Gm22285-201ENSMUST00000178576 94 ntBASIC-0.47□□□□□ -2.49
HttP42859 Gm22417-201ENSMUST00000178656 94 ntBASIC-0.47□□□□□ -2.49
HttP42859 Snord116l2-201ENSMUST00000178675 94 ntBASIC-0.47□□□□□ -2.49
HttP42859 Gm26270-201ENSMUST00000178690 94 ntBASIC-0.47□□□□□ -2.49
HttP42859 Snord116l16-201ENSMUST00000178777 94 ntBASIC-0.47□□□□□ -2.49
HttP42859 Gm23313-201ENSMUST00000178931 94 ntBASIC-0.47□□□□□ -2.49
HttP42859 Snord116l17-201ENSMUST00000178936 94 ntBASIC-0.47□□□□□ -2.49
HttP42859 Gm23089-201ENSMUST00000178947 94 ntBASIC-0.47□□□□□ -2.49
HttP42859 Snord116l10-201ENSMUST00000179053 94 ntBASIC-0.47□□□□□ -2.49
HttP42859 Gm24153-201ENSMUST00000179280 94 ntBASIC-0.47□□□□□ -2.49
HttP42859 Gm25597-201ENSMUST00000179388 94 ntBASIC-0.47□□□□□ -2.49
HttP42859 Snord116l1-201ENSMUST00000179518 94 ntBASIC-0.47□□□□□ -2.49
HttP42859 Gm25816-201ENSMUST00000179764 94 ntBASIC-0.47□□□□□ -2.49
HttP42859 Snord116l8-201ENSMUST00000179889 94 ntBASIC-0.47□□□□□ -2.49
HttP42859 Snord116l7-201ENSMUST00000179895 94 ntBASIC-0.47□□□□□ -2.49
HttP42859 Snord116l5-201ENSMUST00000179927 94 ntBASIC-0.47□□□□□ -2.49
HttP42859 Snord116l6-201ENSMUST00000179955 94 ntBASIC-0.47□□□□□ -2.49
HttP42859 Gm26188-201ENSMUST00000179963 94 ntBASIC-0.47□□□□□ -2.49
HttP42859 Gm26433-201ENSMUST00000180227 94 ntBASIC-0.47□□□□□ -2.49
HttP42859 Snord116l11-201ENSMUST00000180312 94 ntBASIC-0.47□□□□□ -2.49
HttP42859 Gm22128-201ENSMUST00000180346 94 ntBASIC-0.47□□□□□ -2.49
HttP42859 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC-0.47□□□□□ -2.49
HttP42859 Mir7055-201ENSMUST00000197423 59 ntBASIC-0.47□□□□□ -2.49
HttP42859 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC-0.47□□□□□ -2.49
HttP42859 AC164304.1-201ENSMUST00000226920 272 ntBASIC-0.47□□□□□ -2.49
HttP42859 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC-0.48□□□□□ -2.49
HttP42859 AC139294.2-201ENSMUST00000227159 285 ntBASIC-0.48□□□□□ -2.49
HttP42859 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC-0.48□□□□□ -2.49
HttP42859 Gm25794-201ENSMUST00000083286 107 ntBASIC-0.48□□□□□ -2.49
HttP42859 Gm26108-201ENSMUST00000083973 191 ntBASIC-0.48□□□□□ -2.49
HttP42859 Gm37096-201ENSMUST00000192317 2058 ntBASIC-0.48□□□□□ -2.49
HttP42859 Gm14129-201ENSMUST00000122436 291 ntBASIC-0.48□□□□□ -2.49
HttP42859 Gm23853-201ENSMUST00000158375 104 ntBASIC-0.48□□□□□ -2.49
HttP42859 Gm18396-201ENSMUST00000177095 361 ntBASIC-0.48□□□□□ -2.49
HttP42859 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC-0.48□□□□□ -2.49
HttP42859 Gm43898-201ENSMUST00000204456 424 ntBASIC-0.48□□□□□ -2.49
HttP42859 AC162387.1-201ENSMUST00000213369 213 ntBASIC-0.48□□□□□ -2.49
HttP42859 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC-0.48□□□□□ -2.49
HttP42859 Gm23627-201ENSMUST00000082459 107 ntBASIC-0.48□□□□□ -2.49
HttP42859 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC-0.49□□□□□ -2.49
HttP42859 Gm15719-201ENSMUST00000120619 635 ntBASIC-0.49□□□□□ -2.49
HttP42859 Gm24009-201ENSMUST00000157734 93 ntBASIC-0.49□□□□□ -2.49
HttP42859 Gm22764-201ENSMUST00000158370 92 ntBASIC-0.49□□□□□ -2.49
HttP42859 Gm23312-201ENSMUST00000158774 102 ntBASIC-0.49□□□□□ -2.49
HttP42859 Gm25671-201ENSMUST00000178612 105 ntBASIC-0.49□□□□□ -2.49
HttP42859 Gm23307-201ENSMUST00000179167 105 ntBASIC-0.49□□□□□ -2.49
HttP42859 Gm25286-201ENSMUST00000179790 105 ntBASIC-0.49□□□□□ -2.49
HttP42859 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC-0.49□□□□□ -2.49
HttP42859 Gm43004-201ENSMUST00000201872 703 ntBASIC-0.49□□□□□ -2.49
HttP42859 Gm8508-201ENSMUST00000061226 363 ntBASIC-0.49□□□□□ -2.49
HttP42859 Gm26377-201ENSMUST00000102184 108 ntBASIC-0.49□□□□□ -2.49
HttP42859 Gm15167-201ENSMUST00000121997 187 ntBASIC-0.49□□□□□ -2.49
HttP42859 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC-0.49□□□□□ -2.49
HttP42859 Mir6419-201ENSMUST00000184784 113 ntBASIC-0.49□□□□□ -2.49
HttP42859 Gm44457-201ENSMUST00000198109 76 ntBASIC-0.49□□□□□ -2.49
HttP42859 Gm22779-201ENSMUST00000104085 107 ntBASIC-0.49□□□□□ -2.49
HttP42859 Gm24598-201ENSMUST00000122510 74 ntBASIC-0.49□□□□□ -2.49
Retrieved 100 of 76,532 protein–RNA pairs in 97.7 ms