Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 n-R5s158-201ENSMUST00000104095 118 ntBASIC2.03□□□□□ -2.08
Traf1P39428 Gm14674-201ENSMUST00000117816 342 ntBASIC2.03□□□□□ -2.08
Traf1P39428 Defa-ps8-201ENSMUST00000120972 279 ntBASIC2.03□□□□□ -2.08
Traf1P39428 Gm23435-201ENSMUST00000157183 156 ntBASIC2.03□□□□□ -2.08
Traf1P39428 Gm24348-201ENSMUST00000158710 130 ntBASIC2.03□□□□□ -2.08
Traf1P39428 Gm7258-201ENSMUST00000179317 300 ntBASIC2.03□□□□□ -2.08
Traf1P39428 Gm9892-201ENSMUST00000182415 992 ntBASIC2.03□□□□□ -2.08
Traf1P39428 Mir6379-201ENSMUST00000183392 115 ntBASIC2.03□□□□□ -2.08
Traf1P39428 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Traf1P39428 Gm29657-201ENSMUST00000189807 342 ntBASIC2.03□□□□□ -2.08
Traf1P39428 Gm44010-201ENSMUST00000204432 331 ntBASIC2.03□□□□□ -2.08
Traf1P39428 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC2.03□□□□□ -2.08
Traf1P39428 AC100209.2-201ENSMUST00000224461 451 ntBASIC2.03□□□□□ -2.08
Traf1P39428 Gm26056-201ENSMUST00000083043 104 ntBASIC2.03□□□□□ -2.08
Traf1P39428 Gm23041-201ENSMUST00000083868 106 ntBASIC2.03□□□□□ -2.08
Traf1P39428 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC2.03□□□□□ -2.08
Traf1P39428 Gm26500-201ENSMUST00000101867 106 ntBASIC2.02□□□□□ -2.09
Traf1P39428 Gm25938-201ENSMUST00000104139 166 ntBASIC2.02□□□□□ -2.09
Traf1P39428 Gm14803-201ENSMUST00000117163 361 ntBASIC2.02□□□□□ -2.09
Traf1P39428 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.02□□□□□ -2.09
Traf1P39428 Gm6956-201ENSMUST00000134724 546 ntBASIC2.02□□□□□ -2.09
Traf1P39428 Gm22843-201ENSMUST00000157710 134 ntBASIC2.02□□□□□ -2.09
Traf1P39428 Gm22556-201ENSMUST00000157803 100 ntBASIC2.02□□□□□ -2.09
Traf1P39428 Gm22665-201ENSMUST00000158720 275 ntBASIC2.02□□□□□ -2.09
Traf1P39428 Gm17100-201ENSMUST00000168963 272 ntBASIC2.02□□□□□ -2.09
Traf1P39428 Gm24572-201ENSMUST00000175505 88 ntBASIC2.02□□□□□ -2.09
Traf1P39428 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
Traf1P39428 Gm22510-201ENSMUST00000179304 79 ntBASIC2.02□□□□□ -2.09
Traf1P39428 Gm26336-201ENSMUST00000179449 79 ntBASIC2.02□□□□□ -2.09
Traf1P39428 Gm26390-201ENSMUST00000179628 79 ntBASIC2.02□□□□□ -2.09
Traf1P39428 Gm28995-201ENSMUST00000186625 261 ntBASIC2.02□□□□□ -2.09
Traf1P39428 Gm36891-201ENSMUST00000191995 655 ntBASIC2.02□□□□□ -2.09
Traf1P39428 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC2.02□□□□□ -2.09
Traf1P39428 AC122905.2-201ENSMUST00000220325 269 ntBASIC2.02□□□□□ -2.09
Traf1P39428 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC2.02□□□□□ -2.09
Traf1P39428 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2.02□□□□□ -2.09
Traf1P39428 Gm42755-201ENSMUST00000198533 1493 ntBASIC2.01□□□□□ -2.09
Traf1P39428 Gm23015-201ENSMUST00000104145 128 ntBASIC2.01□□□□□ -2.09
Traf1P39428 Gm15030-201ENSMUST00000119804 484 ntBASIC2.01□□□□□ -2.09
Traf1P39428 Gm26194-201ENSMUST00000175036 71 ntBASIC2.01□□□□□ -2.09
Traf1P39428 Gm25253-201ENSMUST00000179958 107 ntBASIC2.01□□□□□ -2.09
Traf1P39428 Gm27898-201ENSMUST00000183987 80 ntBASIC2.01□□□□□ -2.09
Traf1P39428 Gm28414-201ENSMUST00000190111 294 ntBASIC2.01□□□□□ -2.09
Traf1P39428 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC2.01□□□□□ -2.09
Traf1P39428 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Traf1P39428 Mir340-201ENSMUST00000083483 98 ntBASIC2.01□□□□□ -2.09
Traf1P39428 Gm10360-201ENSMUST00000097219 272 ntBASIC2.01□□□□□ -2.09
Traf1P39428 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.01□□□□□ -2.09
Traf1P39428 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Traf1P39428 AC121844.2-201ENSMUST00000219067 2066 ntBASIC2□□□□□ -2.09
Traf1P39428 Mir374b-201ENSMUST00000102314 95 ntBASIC2□□□□□ -2.09
Traf1P39428 Gm25371-201ENSMUST00000158162 101 ntBASIC2□□□□□ -2.09
Traf1P39428 Gm22075-201ENSMUST00000158599 192 ntBASIC2□□□□□ -2.09
Traf1P39428 Mup-ps11-201ENSMUST00000178040 545 ntBASIC2□□□□□ -2.09
Traf1P39428 Mup-ps3-201ENSMUST00000178315 545 ntBASIC2□□□□□ -2.09
Traf1P39428 Gm26265-202ENSMUST00000196326 133 ntBASIC2□□□□□ -2.09
Traf1P39428 AC117232.1-201ENSMUST00000197964 119 ntBASIC2□□□□□ -2.09
Traf1P39428 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC2□□□□□ -2.09
Traf1P39428 AC101945.1-201ENSMUST00000226734 466 ntBASIC2□□□□□ -2.09
Traf1P39428 Gm18360-201ENSMUST00000173327 1524 ntBASIC2□□□□□ -2.09
Traf1P39428 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Traf1P39428 Gm14972-201ENSMUST00000121780 364 ntBASIC1.99□□□□□ -2.09
Traf1P39428 Gm11254-201ENSMUST00000122368 653 ntBASIC1.99□□□□□ -2.09
Traf1P39428 Gm23181-201ENSMUST00000158685 110 ntBASIC1.99□□□□□ -2.09
Traf1P39428 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC1.99□□□□□ -2.09
Traf1P39428 Gm24308-201ENSMUST00000177773 114 ntBASIC1.99□□□□□ -2.09
Traf1P39428 Gm24487-201ENSMUST00000178017 63 ntBASIC1.99□□□□□ -2.09
Traf1P39428 Gm24390-201ENSMUST00000179578 62 ntBASIC1.99□□□□□ -2.09
Traf1P39428 Gm24638-201ENSMUST00000179807 132 ntBASIC1.99□□□□□ -2.09
Traf1P39428 Gm28257-201ENSMUST00000185244 463 ntBASIC1.99□□□□□ -2.09
Traf1P39428 Gm29167-201ENSMUST00000190024 377 ntBASIC1.99□□□□□ -2.09
Traf1P39428 Gm18291-201ENSMUST00000190791 301 ntBASIC1.99□□□□□ -2.09
Traf1P39428 Gm43472-201ENSMUST00000200175 154 ntBASIC1.99□□□□□ -2.09
Traf1P39428 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
Traf1P39428 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.98□□□□□ -2.09
Traf1P39428 Gm22761-201ENSMUST00000102278 96 ntBASIC1.98□□□□□ -2.09
Traf1P39428 Gm25377-201ENSMUST00000104334 129 ntBASIC1.98□□□□□ -2.09
Traf1P39428 Gm22791-201ENSMUST00000157232 145 ntBASIC1.98□□□□□ -2.09
Traf1P39428 Gm23535-201ENSMUST00000157542 106 ntBASIC1.98□□□□□ -2.09
Traf1P39428 Gm25434-201ENSMUST00000158278 167 ntBASIC1.98□□□□□ -2.09
Traf1P39428 Gm24799-201ENSMUST00000178431 79 ntBASIC1.98□□□□□ -2.09
Traf1P39428 Mir7093-201ENSMUST00000184195 101 ntBASIC1.98□□□□□ -2.09
Traf1P39428 Gm43431-201ENSMUST00000198577 340 ntBASIC1.98□□□□□ -2.09
Traf1P39428 Gm43993-201ENSMUST00000203972 247 ntBASIC1.98□□□□□ -2.09
Traf1P39428 Gm45365-201ENSMUST00000209489 256 ntBASIC1.98□□□□□ -2.09
Traf1P39428 Gm5023-201ENSMUST00000217442 587 ntBASIC1.98□□□□□ -2.09
Traf1P39428 AC102369.1-201ENSMUST00000218415 373 ntBASIC1.98□□□□□ -2.09
Traf1P39428 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC1.98□□□□□ -2.09
Traf1P39428 AC151833.1-201ENSMUST00000227752 574 ntBASIC1.98□□□□□ -2.09
Traf1P39428 Rny3-201ENSMUST00000083011 102 ntBASIC1.98□□□□□ -2.09
Traf1P39428 Gm24615-201ENSMUST00000083268 113 ntBASIC1.98□□□□□ -2.09
Traf1P39428 Mir148b-201ENSMUST00000083626 97 ntBASIC1.98□□□□□ -2.09
Traf1P39428 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Traf1P39428 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Traf1P39428 Gm24851-201ENSMUST00000158028 103 ntBASIC1.97□□□□□ -2.09
Traf1P39428 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC1.97□□□□□ -2.09
Traf1P39428 Gm9156-201ENSMUST00000189660 463 ntBASIC1.97□□□□□ -2.09
Traf1P39428 Gm38050-201ENSMUST00000191904 238 ntBASIC1.97□□□□□ -2.09
Traf1P39428 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Traf1P39428 Gm43035-201ENSMUST00000197626 517 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 359 ms