Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
P20040 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.36□□□□□ -2.19
P20040 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
P20040 Gm23535-201ENSMUST00000157542 106 ntBASIC1.36□□□□□ -2.19
P20040 Gm26181-201ENSMUST00000157687 106 ntBASIC1.36□□□□□ -2.19
P20040 Gm3027-201ENSMUST00000167579 451 ntBASIC1.36□□□□□ -2.19
P20040 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.36□□□□□ -2.19
P20040 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.36□□□□□ -2.19
P20040 Gm24638-201ENSMUST00000179807 132 ntBASIC1.36□□□□□ -2.19
P20040 Mir6419-201ENSMUST00000184784 113 ntBASIC1.36□□□□□ -2.19
P20040 Gm8125-201ENSMUST00000216602 738 ntBASIC1.36□□□□□ -2.19
P20040 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.36□□□□□ -2.19
P20040 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.36□□□□□ -2.19
P20040 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
P20040 Gm5899-201ENSMUST00000071770 270 ntBASIC1.36□□□□□ -2.19
P20040 Gm24536-201ENSMUST00000083144 107 ntBASIC1.36□□□□□ -2.19
P20040 Mir872-201ENSMUST00000104728 81 ntBASIC1.35□□□□□ -2.19
P20040 Gm14803-201ENSMUST00000117163 361 ntBASIC1.35□□□□□ -2.19
P20040 Gm11854-201ENSMUST00000117839 446 ntBASIC1.35□□□□□ -2.19
P20040 Gm15443-201ENSMUST00000118947 820 ntBASIC1.35□□□□□ -2.19
P20040 Gm11835-201ENSMUST00000120635 663 ntBASIC1.35□□□□□ -2.19
P20040 Gm6956-201ENSMUST00000134724 546 ntBASIC1.35□□□□□ -2.19
P20040 Gm24076-201ENSMUST00000158179 94 ntBASIC1.35□□□□□ -2.19
P20040 Gm25253-201ENSMUST00000179958 107 ntBASIC1.35□□□□□ -2.19
P20040 Gm18433-201ENSMUST00000192747 197 ntBASIC1.35□□□□□ -2.19
P20040 Gm44320-201ENSMUST00000199276 86 ntBASIC1.35□□□□□ -2.19
P20040 Gm38395-201ENSMUST00000199904 830 ntBASIC1.35□□□□□ -2.19
P20040 Gm45456-201ENSMUST00000210841 243 ntBASIC1.35□□□□□ -2.19
P20040 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.35□□□□□ -2.19
P20040 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.35□□□□□ -2.19
P20040 Snora3-201ENSMUST00000083082 132 ntBASIC1.35□□□□□ -2.19
P20040 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC1.35□□□□□ -2.19
P20040 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.35□□□□□ -2.19
P20040 Gm13729-201ENSMUST00000120328 406 ntBASIC1.34□□□□□ -2.19
P20040 Gm11606-201ENSMUST00000120706 617 ntBASIC1.34□□□□□ -2.19
P20040 Gm22027-201ENSMUST00000122737 127 ntBASIC1.34□□□□□ -2.19
P20040 Gm24895-201ENSMUST00000122742 74 ntBASIC1.34□□□□□ -2.19
P20040 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.34□□□□□ -2.19
P20040 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.34□□□□□ -2.19
P20040 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.34□□□□□ -2.19
P20040 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.34□□□□□ -2.19
P20040 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.34□□□□□ -2.19
P20040 Gm43993-201ENSMUST00000203972 247 ntBASIC1.34□□□□□ -2.19
P20040 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC1.34□□□□□ -2.19
P20040 AC126554.1-201ENSMUST00000222161 271 ntBASIC1.34□□□□□ -2.19
P20040 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.34□□□□□ -2.19
P20040 AC162857.1-201ENSMUST00000226614 400 ntBASIC1.34□□□□□ -2.19
P20040 Gm23614-201ENSMUST00000082598 107 ntBASIC1.34□□□□□ -2.19
P20040 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
P20040 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
P20040 Gm25938-201ENSMUST00000104139 166 ntBASIC1.33□□□□□ -2.2
P20040 Gm14882-201ENSMUST00000117216 218 ntBASIC1.33□□□□□ -2.2
P20040 Gm11862-201ENSMUST00000119678 659 ntBASIC1.33□□□□□ -2.2
P20040 Gm23656-201ENSMUST00000122626 112 ntBASIC1.33□□□□□ -2.2
P20040 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.33□□□□□ -2.2
P20040 Gm25914-201ENSMUST00000157618 153 ntBASIC1.33□□□□□ -2.2
P20040 Gm24348-201ENSMUST00000158710 130 ntBASIC1.33□□□□□ -2.2
P20040 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.33□□□□□ -2.2
P20040 Gm26435-201ENSMUST00000179026 107 ntBASIC1.33□□□□□ -2.2
P20040 Gm23191-201ENSMUST00000179147 107 ntBASIC1.33□□□□□ -2.2
P20040 Gm27898-201ENSMUST00000183987 80 ntBASIC1.33□□□□□ -2.2
P20040 Gm27517-201ENSMUST00000184347 236 ntBASIC1.33□□□□□ -2.2
P20040 Gm29397-201ENSMUST00000185205 333 ntBASIC1.33□□□□□ -2.2
P20040 Gm44491-201ENSMUST00000196794 96 ntBASIC1.33□□□□□ -2.2
P20040 Gm35736-201ENSMUST00000203681 313 ntBASIC1.33□□□□□ -2.2
P20040 Gm45119-201ENSMUST00000207612 199 ntBASIC1.33□□□□□ -2.2
P20040 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC1.33□□□□□ -2.2
P20040 CT025526.1-201ENSMUST00000217327 267 ntBASIC1.33□□□□□ -2.2
P20040 AC131720.2-201ENSMUST00000220420 431 ntBASIC1.33□□□□□ -2.2
P20040 AC100209.2-201ENSMUST00000224461 451 ntBASIC1.33□□□□□ -2.2
P20040 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.33□□□□□ -2.2
P20040 Gm3867-201ENSMUST00000086108 279 ntBASIC1.33□□□□□ -2.2
P20040 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
P20040 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
P20040 Gm25377-201ENSMUST00000104334 129 ntBASIC1.32□□□□□ -2.2
P20040 Gm25541-201ENSMUST00000116888 126 ntBASIC1.32□□□□□ -2.2
P20040 Gm15162-201ENSMUST00000119325 283 ntBASIC1.32□□□□□ -2.2
P20040 Gm14937-201ENSMUST00000119709 208 ntBASIC1.32□□□□□ -2.2
P20040 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.32□□□□□ -2.2
P20040 Gm11254-201ENSMUST00000122368 653 ntBASIC1.32□□□□□ -2.2
P20040 Gm24632-201ENSMUST00000122770 323 ntBASIC1.32□□□□□ -2.2
P20040 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
P20040 Gm8121-201ENSMUST00000153583 499 ntBASIC1.32□□□□□ -2.2
P20040 Gm23435-201ENSMUST00000157183 156 ntBASIC1.32□□□□□ -2.2
P20040 Gm22315-201ENSMUST00000158010 143 ntBASIC1.32□□□□□ -2.2
P20040 Gm22435-201ENSMUST00000158552 128 ntBASIC1.32□□□□□ -2.2
P20040 Gm24677-201ENSMUST00000158755 150 ntBASIC1.32□□□□□ -2.2
P20040 Igkv17-134-201ENSMUST00000168310 348 ntBASIC1.32□□□□□ -2.2
P20040 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
P20040 Gm26180-201ENSMUST00000179942 107 ntBASIC1.32□□□□□ -2.2
P20040 Gm25936-201ENSMUST00000179952 114 ntBASIC1.32□□□□□ -2.2
P20040 Mir6346-201ENSMUST00000183982 81 ntBASIC1.32□□□□□ -2.2
P20040 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
P20040 Gm28912-201ENSMUST00000189001 234 ntBASIC1.32□□□□□ -2.2
P20040 Gm29167-201ENSMUST00000190024 377 ntBASIC1.32□□□□□ -2.2
P20040 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.32□□□□□ -2.2
P20040 Gm33866-201ENSMUST00000196911 289 ntBASIC1.32□□□□□ -2.2
P20040 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC1.32□□□□□ -2.2
P20040 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC1.32□□□□□ -2.2
P20040 Gm33654-201ENSMUST00000221704 215 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms