Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm44425-201ENSMUST00000203739 429 ntBASIC3.55□□□□□ -1.84
RaraP11416 Gm23723-201ENSMUST00000082996 132 ntBASIC3.55□□□□□ -1.84
RaraP11416 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.55□□□□□ -1.84
RaraP11416 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
RaraP11416 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RaraP11416 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
RaraP11416 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.54□□□□□ -1.84
RaraP11416 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
RaraP11416 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.54□□□□□ -1.84
RaraP11416 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
RaraP11416 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
RaraP11416 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.54□□□□□ -1.84
RaraP11416 Gm43602-201ENSMUST00000196772 300 ntBASIC3.54□□□□□ -1.84
RaraP11416 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.54□□□□□ -1.84
RaraP11416 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.54□□□□□ -1.84
RaraP11416 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.54□□□□□ -1.84
RaraP11416 AC027184.1-201ENSMUST00000226991 424 ntBASIC3.54□□□□□ -1.84
RaraP11416 Gm23136-201ENSMUST00000083425 99 ntBASIC3.54□□□□□ -1.84
RaraP11416 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
RaraP11416 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
RaraP11416 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.53□□□□□ -1.84
RaraP11416 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RaraP11416 Gm26423-201ENSMUST00000104277 128 ntBASIC3.53□□□□□ -1.84
RaraP11416 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC3.53□□□□□ -1.84
RaraP11416 Gm23886-201ENSMUST00000122684 313 ntBASIC3.53□□□□□ -1.84
RaraP11416 Gm15733-201ENSMUST00000132957 242 ntBASIC3.53□□□□□ -1.84
RaraP11416 Gm25059-201ENSMUST00000157367 117 ntBASIC3.53□□□□□ -1.84
RaraP11416 Gm22850-201ENSMUST00000157714 82 ntBASIC3.53□□□□□ -1.84
RaraP11416 Gm28409-201ENSMUST00000187064 103 ntBASIC3.53□□□□□ -1.84
RaraP11416 Gm37081-201ENSMUST00000192034 196 ntBASIC3.53□□□□□ -1.84
RaraP11416 Gm37037-201ENSMUST00000194475 424 ntBASIC3.53□□□□□ -1.84
RaraP11416 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC3.53□□□□□ -1.84
RaraP11416 AC120540.2-201ENSMUST00000221716 387 ntBASIC3.53□□□□□ -1.84
RaraP11416 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
RaraP11416 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.53□□□□□ -1.84
RaraP11416 Gm44114-201ENSMUST00000203270 2727 ntBASIC3.52□□□□□ -1.85
RaraP11416 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
RaraP11416 Gm26081-201ENSMUST00000104068 132 ntBASIC3.52□□□□□ -1.85
RaraP11416 Gm22193-201ENSMUST00000116868 76 ntBASIC3.52□□□□□ -1.85
RaraP11416 Gm14536-201ENSMUST00000118324 138 ntBASIC3.52□□□□□ -1.85
RaraP11416 Gm15027-201ENSMUST00000120922 138 ntBASIC3.52□□□□□ -1.85
RaraP11416 Gm15214-201ENSMUST00000122155 470 ntBASIC3.52□□□□□ -1.85
RaraP11416 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.52□□□□□ -1.85
RaraP11416 Gm29613-201ENSMUST00000185846 313 ntBASIC3.52□□□□□ -1.85
RaraP11416 Gm29544-201ENSMUST00000188860 313 ntBASIC3.52□□□□□ -1.85
RaraP11416 Gm28808-201ENSMUST00000190978 313 ntBASIC3.52□□□□□ -1.85
RaraP11416 AC158597.1-201ENSMUST00000216234 150 ntBASIC3.52□□□□□ -1.85
RaraP11416 Gm26493-201ENSMUST00000083155 136 ntBASIC3.52□□□□□ -1.85
RaraP11416 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
RaraP11416 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
RaraP11416 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RaraP11416 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
RaraP11416 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
RaraP11416 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
RaraP11416 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RaraP11416 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
RaraP11416 Gm25728-201ENSMUST00000104525 159 ntBASIC3.51□□□□□ -1.85
RaraP11416 Gm22722-201ENSMUST00000157467 132 ntBASIC3.51□□□□□ -1.85
RaraP11416 Gm24061-201ENSMUST00000157489 120 ntBASIC3.51□□□□□ -1.85
RaraP11416 Gm22213-201ENSMUST00000157564 119 ntBASIC3.51□□□□□ -1.85
RaraP11416 Gm22833-201ENSMUST00000158292 132 ntBASIC3.51□□□□□ -1.85
RaraP11416 Gm22532-201ENSMUST00000158822 140 ntBASIC3.51□□□□□ -1.85
RaraP11416 Gm22800-201ENSMUST00000175627 94 ntBASIC3.51□□□□□ -1.85
RaraP11416 Gm25817-201ENSMUST00000177758 121 ntBASIC3.51□□□□□ -1.85
RaraP11416 Gm24766-201ENSMUST00000179182 121 ntBASIC3.51□□□□□ -1.85
RaraP11416 Gm18546-201ENSMUST00000197245 676 ntBASIC3.51□□□□□ -1.85
RaraP11416 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.51□□□□□ -1.85
RaraP11416 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RaraP11416 Gm23264-201ENSMUST00000083372 107 ntBASIC3.51□□□□□ -1.85
RaraP11416 Mir101b-201ENSMUST00000083622 97 ntBASIC3.51□□□□□ -1.85
RaraP11416 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.51□□□□□ -1.85
RaraP11416 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
RaraP11416 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
RaraP11416 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.51□□□□□ -1.85
RaraP11416 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RaraP11416 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
RaraP11416 Gm22105-201ENSMUST00000116734 116 ntBASIC3.5□□□□□ -1.85
RaraP11416 Mir1198-201ENSMUST00000116995 121 ntBASIC3.5□□□□□ -1.85
RaraP11416 Gm9119-201ENSMUST00000118866 495 ntBASIC3.5□□□□□ -1.85
RaraP11416 Mir1934-201ENSMUST00000158127 83 ntBASIC3.5□□□□□ -1.85
RaraP11416 Gm26360-201ENSMUST00000158872 103 ntBASIC3.5□□□□□ -1.85
RaraP11416 Gm24811-201ENSMUST00000175313 100 ntBASIC3.5□□□□□ -1.85
RaraP11416 Gm23736-201ENSMUST00000082553 75 ntBASIC3.5□□□□□ -1.85
RaraP11416 Gm22686-201ENSMUST00000082847 100 ntBASIC3.5□□□□□ -1.85
RaraP11416 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC3.5□□□□□ -1.85
RaraP11416 Snora2b-201ENSMUST00000084005 137 ntBASIC3.5□□□□□ -1.85
RaraP11416 Gm10212-201ENSMUST00000087884 324 ntBASIC3.5□□□□□ -1.85
RaraP11416 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
RaraP11416 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
RaraP11416 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RaraP11416 Gm22750-201ENSMUST00000102076 103 ntBASIC3.49□□□□□ -1.85
RaraP11416 Gm23530-201ENSMUST00000104564 137 ntBASIC3.49□□□□□ -1.85
RaraP11416 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC3.49□□□□□ -1.85
RaraP11416 Gm13913-201ENSMUST00000121126 260 ntBASIC3.49□□□□□ -1.85
RaraP11416 Gm22382-201ENSMUST00000158185 130 ntBASIC3.49□□□□□ -1.85
RaraP11416 Gm25012-201ENSMUST00000158396 164 ntBASIC3.49□□□□□ -1.85
RaraP11416 Gm23152-201ENSMUST00000175322 116 ntBASIC3.49□□□□□ -1.85
RaraP11416 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RaraP11416 Gm38311-201ENSMUST00000192945 165 ntBASIC3.49□□□□□ -1.85
RaraP11416 Gm2189-201ENSMUST00000201419 429 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 132.5 ms